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Institut for Bio- og Kemiteknologi

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Zhang, N., Bittner, J. P., Fiedler, M., Beretta, T., De María, P. D., Jakobtorweihen, S. & Kara, S. (2022). Unraveling Alcohol Dehydrogenase Catalysis in Organic-Aqueous Biphasic Systems Combining Experiments and Molecular Dynamics Simulations. ACS Catalysis, 12(15), 9171-9180. https://doi.org/10.1021/acscatal.2c02881

Li, Z., Anankanbil, S., Pedersen, J. N., Nadzieja, M. & Guo, Z. (2023). Nanocellulose fractionated from TEMPO-mediated oxidation of cellulose as an energy-free ingredient for stabilizing Pickering emulsion. Biochemical Engineering Journal, 191, [ 108795]. https://doi.org/10.1016/j.bej.2022.108795

Rocha Martin, V. N., Del’Homme, C., Chassard, C., Schwab, C., Braegger, C., Bernalier-Donadille, A. & Lacroix, C. (2022). A proof of concept infant-microbiota associated rat model for studying the role of gut microbiota and alleviation potential of Cutibacterium avidum in infant colic. Frontiers in nutrition, 9, [902159]. https://doi.org/10.3389/fnut.2022.902159

Zhang, J. & Schwab, C. (2022). Is acrolein a reuterin-borne chemical hazard in biopreserved foods? Food Chemistry Advances, 1, [100044]. https://doi.org/10.1016/j.focha.2022.100044

Schwab, C. (2022). The development of human gut microbiota fermentation capacity during the first year of life. Microbial Biotechnology, 15(12), 2865-2874. https://doi.org/10.1111/1751-7915.14165

Sasaki, M., Schwab, C., Ramirez Garcia, A., Li, Q., Ferstl, R., Bersuch, E., Akdis, C. A., Lauener, R., Frei, R., Roduit, C. & CK-CARE study group (2022). The abundance of Ruminococcus bromii is associated with faecal butyrate levels and atopic dermatitis in infancy. Allergy: European Journal of Allergy and Clinical Immunology, 77(12), 3629-3640. https://doi.org/10.1111/all.15440

Pérez-García, F., Brito, L. F., Irla, M., Jorge, J. M. P. & Sgobba, E. (2022). Editorial: Promising and sustainable microbial feedstocks for biotechnological processes. Frontiers in Microbiology, 13, [973723]. https://doi.org/10.3389/fmicb.2022.973723

Abd El-Maksoud, A. A., Cheng, W., Petersen, S. V., Pandiselvam, R. & Guo, Z. (2022). Covalent phenolic acid-grafted β-lactoglobulin conjugates: Synthesis, characterization, and evaluation of their multifunctional properties. LWT, 172, [114215]. https://doi.org/10.1016/j.lwt.2022.114215

Bialik, O. M., Bookman, R., Elyashiv, H., Marietou, A., Saar, R., Rivlin, T., Taha, N., Benaltabet, T., Lotem, N., Funaro, E. & Antler, G. (2022). Tropical storm-induced disturbance of deep-water porewater profiles, Gulf of Aqaba. Marine Geology, 453, [106926]. https://doi.org/10.1016/j.margeo.2022.106926

Meyer, L-E., Hobisch, M. & Kara, S. (2022). Process intensification in continuous flow biocatalysis by up and downstream processing strategies. Current Opinion in Biotechnology, 78, [102835]. https://doi.org/10.1016/j.copbio.2022.102835

Zhang, M., Gao, Y., Yu, C., Wang, J., Weng, K., Li, Q., He, Y., Guo, Z., Zhang, H., Huang, J. & Li, L. (2022). Transcriptome analysis of malate-induced Schizochytrium sp. FJU-512 reveals a novel pathway for biosynthesis of docosahexaenoic acid with enhanced expression of genes responsible for acetyl-CoA and NADPH accumulation. Frontiers in Microbiology, 13, [1006138]. https://doi.org/10.3389/fmicb.2022.1006138

Nahuel Chanquia, S., Vig Benfeldt, F., Petrovai, N., Santner, P., Hollmann, F., Eser, B. E. & Kara, S. (2022). Immobilization and Application of Fatty Acid Photodecarboxylase in Deep Eutectic Solvents. ChemBioChem, 23(23), [e202200482]. https://doi.org/10.1002/cbic.202200482

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Guo, Z., Kiens, B. & Wiking, L. (2022). SPECIAL MILK LIPIDS FOR HEALTH (SMiL) - COMBINED FRACTIONATION PROCEDURES TO OBTAIN MILK FAT FRACTIONS WITH HEALTH BENEFICIAL PROFILES. Poster session præsenteret ved Arla Food for Health Conference 2022, Viby, Danmark.

Santos Oliveira, J. M., Damianovic, M. H. R. Z. & Foresti, E. (2022). Two-stage anaerobic digestion system for biotransformation of an azo dye in the presence of sulfate: Minimizing competition for reducing equivalents. Journal of Water Process Engineering, 47, [102819]. https://doi.org/10.1016/j.jwpe.2022.102819

Dalby, F. R., Kofoed, M. V. W., Guldberg, L. B. & Feilberg, A. (2022). Acidification with inorganic and organic acids to reduce greenhouse gas emission from pig slurry: Acidification with inorganic and organic acids to reduce greenhouse gas emission from pig slurry. Abstract fra 8th International Greenhouse Gas & Animal Agriculture Conference, Orlando, USA.

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., M. Hacker, S. & Poulsen, T. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. Poster session præsenteret ved EMBO Chemical Biology, Heidelberg, Tyskland.

Meyer, L-E., Fogtmann Hauge, B., Müller Kvorning, T., De Santis, P. & Kara, S. (2022). Continuous oxyfunctionalizations catalyzed by unspecific peroxygenase. Catalysis Science & Technology, 12(21), 6473-6485. https://doi.org/10.1039/D2CY00650B

Vernet, G., Hobisch, M. & Kara, S. (2022). Process intensification in oxidative biocatalysis. Current Opinion in Green and Sustainable Chemistry, 38, [100692]. https://doi.org/10.1016/j.cogsc.2022.100692

Jurkas, V., Weissensteiner, F., De Santis, P., Vrabl, S., A. Sorgenfrei, F., Bierbaumer, S., Kara, S., Kourist, R., P. Wangikar, P., Winkler, C. K. & Kroutil, W. (2022). Transmembrane Shuttling of Photosynthetically Produced Electrons to Propel Extracellular Biocatalytic Redox Reactions in a Modular Fashion. Angewandte Chemie, 61(40), [e202207971]. https://doi.org/10.1002/anie.202207971

Hobisch, M., De Santis, P., Serban, S., Basso, A., Byström, E. & Kara, S. (2022). Peroxygenase-Driven Ethylbenzene Hydroxylation in a Rotating Bed Reactor. Organic Process Research & Development, 26(9), 2761-2765. https://doi.org/10.1021/acs.oprd.2c00211

De Santis, P., Petrovai, N., Meyer, L-E., Hobisch, M. & Kara, S. (2022). A holistic carrier-bound immobilization approach for unspecific peroxygenase. Frontiers in chemistry, 10, [985997]. https://doi.org/10.3389/fchem.2022.985997

Petermeier, P., Bittner, J. P., Müller, S., Byström, E. & Kara, S. (2022). Design of a green chemoenzymatic cascade for scalable synthesis of bio-based styrene alternatives. Green Chemistry, 24(18), 6889-6899. https://doi.org/10.1039/d2gc01629j

Pourjafar, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2022). Construction, expression and functional characterization of an engineered antibody against tumor antigen MUC-1C. Protein Expression and Purification, 199, [106148]. https://doi.org/10.1016/j.pep.2022.106148

Zhou, Y., Pedersen, J. N., Pedersen, J. N., Jones, N. C., Hoffmann, S. V., Petersen, S. V., Pedersen, J. S., Perriman, A., Gao, R. & Guo, Z. (2022). Superanionic Solvent-Free Liquid Enzymes Exhibit Enhanced Structures and Activities. Advanced Science, 9(32), [2202359]. https://doi.org/10.1002/advs.202202359

Andersen, F. D., Pedersen, K. D., Wilkens Juhl, D., Mygind, T., Chopin, P., B. Svenningsen, E., Poulsen, T. B., Braad Lund, M., Schramm, A., Gotfredsen, C. H. & Tørring, T. (2022). Triculamin: An Unusual Lasso Peptide with Potent Antimycobacterial Activity. Journal of Natural Products, 85(6), 1514-1521. https://doi.org/10.1021/acs.jnatprod.2c00065

Bogojevic, O., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2022). Designer phospholipids – structural retrieval, chemo-/bio- synthesis and isotopic labeling. Biotechnology Advances, 60, [108025]. https://doi.org/10.1016/j.biotechadv.2022.108025

Li, Z., Anankanbil, S., Li, L., Lyu, J., Nadzieja, M. & Guo, Z. (2023). Alkylsuccinylated oxidized cellulose-based amphiphiles as a novel multi-purpose ingredient for stabilizing O/W emulsions. Food Hydrocolloids, 134, [108014]. https://doi.org/10.1016/j.foodhyd.2022.108014

Ma, Y., Zhang, N., Vernet, G. & Kara, S. (2022). Design of Fusion Enzymes for Biocatalytic Applications in Aqueous and Non-aqueous Media. Frontiers in Bioengineering and Biotechnology, 10, [944226]. https://doi.org/10.3389/fbioe.2022.944226

Yang, T., Zhang, Y., Xu, L., Zhu, H., Zhang, J., Guo, Z., Huang, F. & Zheng, M. (2022). pH-Switchable Pickering Interfacial Biocatalysis: One-Pot Enzymatic Synthesis of Phytosterol Esters with Low-Value Rice Bran Oi. ACS Sustainable Chemistry & Engineering, 10(21), 6963–6972. https://doi.org/10.1021/acssuschemeng.1c08719

Bai, L., Jiang, Y., Xia, D., Wei, Z., Spinney, R., Dionysiou, D. D., Minakata, D., Xiao, R., Xie, H. B. & Chai, L. (2022). Mechanistic Understanding of Superoxide Radical-Mediated Degradation of Perfluorocarboxylic Acids. Environmental Science and Technology, 56(1), 624-633. https://doi.org/10.1021/acs.est.1c06356

de Jonge, N., Poulsen, J. S., Vechi, N. T., Kofoed, M. V. W. & Nielsen, J. L. (2022). Wood-Ljungdahl pathway utilisation during in situ H₂ biomethanation. Science of the total Environment, 806(Part 3), [151254]. https://doi.org/10.1016/j.scitotenv.2021.151254

Romio, C., Vedel Wegener Kofoed, M. & Bjarne Møller, H. (2022). Effect of ultrasonic and electrokinetic post-treatments on methane yield and viscosity of agricultural digestate. Bioresource Technology, 358, [127388]. https://doi.org/10.1016/j.biortech.2022.127388

Röllig, R., Paul, C. E., Duquesne, K., Kara, S. & Alphand, V. (2022). Exploring the temperature effect on enantioselectivity of a Baeyer-Villiger biooxidation by the 2,5-DKCMO module: The SLM approach. ChemBioChem, 23(15), [e202200293]. https://doi.org/10.1002/cbic.202200293

Neuzil-Bunesova, V., Ramirez Garcia, A., Modrackova, N., Makovska, M., Sabolova, M., Spröer, C., Bunk, B., Blom, J. & Schwab, C. (2022). Feed Insects as a Reservoir of Granadaene-Producing Lactococci. Frontiers in Microbiology, 13, [848490]. https://doi.org/10.3389/fmicb.2022.848490

Zhang, Y., Pedersen, J. N., Eser, B. E. & Guo, Z. (2022). Biodegradation of polyethylene and polystyrene: From microbial deterioration to enzyme discovery. Biotechnology Advances, 60, [107991]. https://doi.org/10.1016/j.biotechadv.2022.107991

Dai, R. & Guo, Z. (2022). Pd/Ni-Al hydrotalcite for base-free alcohol oxidation: Dependency of activity and selectivity on palladium precursors and reduction reagents. Molecular Catalysis , 526, [112403]. https://doi.org/10.1016/j.mcat.2022.112403

Xiao, R., Fu, Y., Bai, L., Chu, C., Ma, J., Wei, Z., Spinney, R., Dionysiou, D. D. & Pu, J. (2022). Kinetics and mechanistic aspects of superoxide radical-mediated transformation of ascorbate. Journal of Environmental Chemical Engineering, 10(3), [107736]. https://doi.org/10.1016/j.jece.2022.107736

Meyer, L-E., Andersen, M. B. & Kara, S. (2022). A Deep Eutectic Solvent Thermomorphic Multiphasic System for Biocatalytic Applications. Angewandte Chemie International Edition, 61(31), [e202203823]. https://doi.org/10.1002/anie.202203823

Yazdi, F. G., Dalgaard, L. B., Li, Q., Ruscheweyh, H-J., Thøgersen, R., Bertram, H. C. S., Hansen, M. & Schwab, C. (2022). Long-term daily high-protein, drained yoghurt consumption alters abundance of selected functional groups of the human gut microbiota and fecal short-chain fatty acid profiles in a cohort of overweight and obese women. Journal of Functional Foods, 93, [105089]. https://doi.org/10.1016/j.jff.2022.105089

Dalby, F. R., Guldberg, L. B., Feilberg, A. & Kofoed, M. V. W. (2022). Reducing greenhouse gas emissions from pig slurry by acidification with organic and inorganic acids. PLOS ONE, 17(5), [e0267693]. https://doi.org/10.1371/journal.pone.0267693

Leitãodos Santos, O. A., Goncalves, T. A., Sodre, V., Vilela, N., Tomazetto, G., Squina, F. M. & Garcia, W. (2022). Recombinant expression, purification and characterization of an active bacterial feruloyl-CoA synthase with potential for application in vanillin production. Protein Expression and Purification, 197, [106109]. https://doi.org/10.1016/j.pep.2022.106109

Bai, L., Jiang, Y., Xia, D., Wei, Z., Spinney, R., Dionysiou, D. D., Minakata, D., Xiao, R., Xie, H. B. & Chai, L. (2022). Response to Comment on "mechanistic Understanding of Superoxide Radical-Mediated Degradation of Perfluorocarboxylic Acids". Environmental Science and Technology, 56(8), 5289-5291. https://doi.org/10.1021/acs.est.2c01335

Bai, L., He, L., Fu, Y., Chu, C., Wei, Z., Spinney, R., Dionysiou, D. D., Liang, Y. & Xiao, R. (2022). New insight to superoxide radical-mediated degradation of pentachlorophenate: Kinetic determination and theoretical calculations. Chemical Communications, 58(16), 2666-2669. https://doi.org/10.1039/d1cc06834b

Irla, M. & Wendisch, V. F. (2022). Efficient cell factories for the production of N-methylated amino acids and for methanol-based amino acid production. Microbial Biotechnology, 15(8), 2145-2159. https://doi.org/10.1111/1751-7915.14067

Lyu, J., Zhang, J., Zhu, J., Chen, S., Han, T., Zhang, Y., Gao, R., Xie, G. & Guo, Z. (2022). Molecular dynamics simulation guided distal mutation of Thermotoga naphthophila β-glucosidase for significantly enhanced synthesis of galactooligosaccharides and expanded product scope. International Journal of Biological Macromolecules, 210, 21-32. https://doi.org/10.1016/j.ijbiomac.2022.05.002

Huang, Z., Guo, S., Guo, Z., He, Y. & Chen, B. (2022). Integrated green one-step strategy for concurrent recovery of phycobiliproteins and polyunsaturated fatty acids from wet Porphyridium biomass. Food Chemistry, 389, [133103]. https://doi.org/10.1016/j.foodchem.2022.133103

Milic, M., Byström, E., Domínguez de María, P. & Kara, S. (2022). Enzymatic Cascade for the Synthesis of 2,5-Furandicarboxylic Acid in Biphasic and Microaqueous Conditions: ‘Media-Agnostic’ Biocatalysts for Biorefineries. ChemSusChem, 15(9), [e202102704]. https://doi.org/10.1002/cssc.202102704

Gonçalves, T. A., Sodré, V., da Silva, S. N., Vilela, N., Tomazetto, G., Araujo, J. N., Muniz, J. R. C., Fill, T. P., Damasio, A., Garcia, W. & Squina, F. M. (2022). Applying biochemical and structural characterization of hydroxycinnamate catabolic enzymes from soil metagenome for lignin valorization strategies. Applied Microbiology and Biotechnology, 106(7), 2503-2516. https://doi.org/10.1007/s00253-022-11885-3

Liberato, M. V., Campos, B. M., Tomazetto, G., Crouch, L. I., Garcia, W., Zeri, A. C. D. M., Bolam, D. N. & Squina, F. M. (2022). Unique properties of a Dictyostelium discoideum carbohydrate-binding module expand our understanding of CBM-ligand interactions. The Journal of Biological Chemistry, 298(5), [101891]. https://doi.org/10.1016/j.jbc.2022.101891

Tang, T., Li, Q., Huang, Z., Wu, Y., Yan, B., Zhao, J., Zhang, H., Chen, W. & Fan, D. (2022). Evaluation of Shandong pancake with sourdough fermentation on the alleviation of type 2 diabetes symptoms in mice. Journal of Functional Foods, 90, [104952]. https://doi.org/10.1016/j.jff.2022.104952

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AU Engineering