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Institut for Bio- og Kemiteknologi

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Benfeldt, F. V., Wang, F., Bredahl, N., Gao, R., Guo, Z. & Eser, B. E. (2024). A Highly Efficient Ferulic Acid Decarboxylase from Capronia coronata: Characterization and Biocatalytic Applications. (s. xxx-xxx). ChemRxiv https://doi.org/10.26434/chemrxiv-2024-0npph-v2

Ouyang, Y., Jiang, Z., Ulstrup, S., Guo, Z., Wang, Z. & Dong, MD. (2024). Enhancing MoS2 Electronic Performance with Solid-State Lithium-Ion Electrolyte Contacts through Dielectric Screening. A C S Nano, xxx-xxx. https://doi.org/10.1021/acsnano.4c05973

Gkantzou, E., Koulopoulou, T., Brass, H., Schönauer, D., Glieder, A. & Kara, S. (2024). Unspecific peroxygenase immobilization in 3D-printed microfluidics: towards tailor-made screening platforms. Catalysis Science and Technology, 14(22), 6496-6502. https://doi.org/10.1039/d4cy00869c

Kundu, D., Samanta, P., Bhowmick, S., Panigrahi, S., Dey, S., Nath, K., Rajak, R. C., Sherpa, K. C., Barathi, A., Kofoed, M. V. W., Kumar, S. & Ki Lin, C. S. (2024). Heterogeneous catalysts for sustainable biofuel production: A paradigm shift towards renewable energy. Biocatalysis and Agricultural Biotechnology, 62, Artikel 103432. https://doi.org/10.1016/j.bcab.2024.103432

Ng, K. S., Bambace, M. F., Andersen, E. B., Meyer, R. L. & Schwab, C. (2024). Environmental pH and compound structure affect the activity of short-chain carboxylic acids against planktonic growth, biofilm formation, and eradication of the food pathogen Salmonella enterica. Microbiology Spectrum, 12(11), Artikel e0165824. https://doi.org/10.1128/spectrum.01658-24

Rohbohm, N., Lang, M., Erben, J., Gemeinhardt, K., Patel, N., Ilic, I. K., Hafenbradl, D., Rodrigo Quejigo, J. & Angenent, L. T. (2024). Performance Effects of Different Shutdown Methods on Three Electrode Materials for Electromethanogenesis. ChemElectroChem, 11(21), Artikel e202400372. https://doi.org/10.1002/celc.202400372

Chanquia, S. N., Bittner, J. P., Santner, P., Szabó, L. K., Madsen, J. S., Øhlenschlæger, M. L., Sarvari, A. G., Merrild, A. H., Fo̷nss, K. G., Jaron, D., Lutz, L., Kara, S. & Eser, B. E. (2024). Active-Site Mutagenesis of Fatty Acid Photodecarboxylase: Experimental and Computational Insight into Substrate Chain-Length Specificity. ACS Catalysis, 14(21), 15837-15849. https://doi.org/10.1021/acscatal.4c02970

Zhang, C., Peng, S., Ouyang, Y., Han, J., Li, C., Wei, Y., Jiang, Y., Dong, M. & Wang, J. (2024). Broadband self-powered MoS₂/PdSe₂/WSe₂ PSN heterojunction photodetector for high-performance optical imaging and communication. Optics Express, 32(22), 38136-38146. https://doi.org/10.1364/OE.539148

Nissen, S. H., Juul, L., Stødkilde, L., Bruhn, A., Ambye-Jensen, M. & Dalsgaard, T. K. (2024). Pilot-scale protein extraction of green seaweed (Ulva spp.) whole biomass and pulp – Investigating biochemical composition and protein digestibility in a rat trial. Food and Bioproducts Processing, 148, 353-364. https://doi.org/10.1016/j.fbp.2024.10.003

Ravenni, G., Thomsen, T. P., Smith, A. M., Ambye-Jensen, M., Rohde-Nielsen, K. T. & Henriksen, U. B. (2024). Integration of a drying and pyrolysis system in a green biorefinery: biochar product quality and impacts on the overall energy balance and climate footprint. Biomass Conversion and Biorefinery, 14(20), 25143-25159. https://doi.org/10.1007/s13399-023-04877-4

Lambrecht, S., Gazizova, A., Kara, S., Meyer, J. & Jopp, S. (2024). Antimicrobial properties and biocompatibility of semi-synthetic carbohydrate-based ionic hydrogels. RSC Advances, 14(42), 30719-30731. https://doi.org/10.1039/d4ra05695g

Hougaard, R. F., Andersen, F. D. & Tørring, T. (2024). Scaffolding scientific inquiry: Adapting Tiny Earth for engaging high school students and their teachers in authentic research. Abstract fra The Nordic conference on Science Education Research, NFSUN 2024, Reykjavik, Island.

Schwab, C. & Bambace, M. F. (2024). Traditional and novel applications of sourdough microbes in Northern Europe and the Baltic countries. I Sourdough Microbiota and Starter Cultures for Industry (s. 93-129). Springer International Publishing. https://doi.org/10.1007/978-3-031-48604-3_4

Huang, Z., Qin, D., Abuduwupuer, X., Cao, L., Piao, Y., Shao, Z., Jiang, L., Guo, Z. & Gao, R. (2024). Regulate catalytic performance by engineering non-regular structure of extradiol dioxygenase: An entrance to bottom strategy. International Journal of Biological Macromolecules, 281(Part 1), 1-13. Artikel 136246. https://doi.org/10.1016/j.ijbiomac.2024.136246

Li, Q., Ruscheweyh, H. J., Østergaard, L. H., Libertella, M., Simonsen, K. S., Sunagawa, S., Scoma, A. & Schwab, C. (2024). Trait-based study predicts glycerol/diol dehydratases as a key function of the gut microbiota of hindgut-fermenting carnivores. Microbiome, 12, Artikel 178. https://doi.org/10.1186/s40168-024-01863-4

Dalby, F. R., Hafner, S. D., Ambrose, H. W. & Adamsen, A. P. S. (2024). Modelling and measuring aerobic and anaerobic carbon loss from pig slurry storage. Abstract fra EGU, Vienna, Østrig. https://doi.org/10.5194/egusphere-egu24-22103

Kirstine Hessellund Nielsen, A., Ditlev Mørck Ottosen, L. & Vedel Wegener Kofoed, M. (2024). Development of membrane bioreactor for conversion of flue Gas-CO₂ to C1 and C2 biomolecules. Chemical Engineering Journal, 499, Artikel 155780. https://doi.org/10.1016/j.cej.2024.155780

Ambrose, H. W., Bambace, M. F., Marietou, A., Schwab, C., Kofoed, M. V. W. & Feilberg, A. (2024). Reuterin based biological treatment to mitigate methane emissions from pig slurry storage. Abstract fra International symposium on gas and dust emissions from livestock (2024), Valencia, Spanien.

Merrild, A. H., Johnsen, N. K., Zhang, M., Bogojevic, O., Ouyang, Y. & Guo, Z. (2024). De Novo Synthesis of Perdeuterated Phosphoinositide by Installing a Non-native Phospholipid Biopathway in E. coli. ACS Synthetic Biology, 13(10), 3344-3353. Artikel 39292964. https://doi.org/10.1021/acssynbio.4c00413

de la Cruz, M., Kunert, F., Taymaz-Nikerel, H., Sigala, J.-C., Gosset, G., Büchs, J. & Lara, A. R. (2024). Increasing the Pentose Phosphate Pathway Flux to Improve Plasmid DNA Production in Engineered E. coli. Microorganisms, 12(1), Artikel 150. https://doi.org/10.3390/microorganisms12010150

Sieborg, M. U., Nielsen, A. K. H., Ottosen, L. D. M., Daasbjerg, K. & Kofoed, M. V. W. (2024). Bio-integrated carbon capture and utilization: at the interface between capture chemistry and archaeal CO₂ reduction. Nature Communications, 15(1), Artikel 7492. https://doi.org/10.1038/s41467-024-51700-3

Dalby, F. R., Hafner, S. D., Ambrose, H. W. & Adamsen, A. P. S. (2024). Pig manure degradation and carbon emission: Measuring and modeling combined aerobic–anaerobic transformations. Journal of Environmental Quality, 53(5), 589-603. https://doi.org/10.1002/jeq2.20603

Lambrecht, S., Biermann, M., Kara, S., Jopp, S. & Meyer, J. (2024). A novel characterization technique for hydrogels - in situ rheology-Raman spectroscopy for gelation and polymerization tracking. Materials Advances, 5(17), 6957-6966. https://doi.org/10.1039/d4ma00543k

Petermeier, P., Domínguez de María, P., Byström, E. & Kara, S. (2024). Intensified, Kilogram-Scaled, and Environment-Friendly: Chemoenzymatic Synthesis of Bio-Based Acylated Hydroxystyrenes. ACS Sustainable Chemistry and Engineering, 12(34), 12869-12878. https://doi.org/10.1021/acssuschemeng.4c03648

Anand, M., Panigrahi, S., Kofoed, M. V. W., Aghababaei, R. & Agarwala, S. (2024). Bioinspired poly(vinyl alcohol) films with tunable adhesion and self-healing for biodegradable electronics and beyond. Sustainable Materials and Technologies, 41, Artikel e01084. https://doi.org/10.1016/j.susmat.2024.e01084

Gaffey, J., Matinez, A. A., Andrade, T. A., Ambye-Jensen, M., Bishop, G., Collins, M. N. & Styles, D. (2024). Assessing the environmental footprint of alternative green biorefinery protein extraction techniques from grasses and legumes. Science of the Total Environment, 949, Artikel 175035. https://doi.org/10.1016/j.scitotenv.2024.175035

Vernet, G., Ma, Y., Serban, S., Basso, A., Zhang, N. & Kara, S. (2024). Metal Affinity Fusion Enzyme Immobilization: Batch Process Showcase for Cascading Alcohol Oxidation and Bayer-Villiger Oxidation in Microaqueous Media. ACS Sustainable Chemistry and Engineering, 12(29), 10820-10830. https://doi.org/10.1021/acssuschemeng.4c02236

Pham, T. H., Thomas, R., Schwab, C., Martinez, M. M. & Vidal, N. P. (2024). Unraveling the neutral and polar lipidome of Nordic brown macroalgae: A sustainable source of functional lipids. Food Chemistry, 459, Artikel 140415. https://doi.org/10.1016/j.foodchem.2024.140415

Lopez Fetzer, D. E., Andrade, T. A. & Ambye-Jensen, M. (2024). Xylose, Glucose and Fructose Extraction from Different Herbaceous Crops in a Green Biorefinery Demonstration Platform: a Comparative Study. Chemical Engineering Transactions, 109, 235-240. https://doi.org/10.3303/CET24109040

Sadegh, N., Uniacke, J., Feilberg, A. & Kofoed, M. V. W. (2024). Assessment of transient hydrogen sulfide peak emissions caused by biogas plant operation. Journal of Cleaner Production, 468, Artikel 142920. https://doi.org/10.1016/j.jclepro.2024.142920

Andrade, T. A., dos Passos, N. H. M., Fetzer, D. E. L. & Ambye-Jensen, M. (2024). Impact of Biomass Harvest-to-Processing Time on Protein Extraction in a Green Biorefinery Demonstration Plant. Chemical Engineering Transactions, 109, 109-114. https://doi.org/10.3303/CET24109019

Mi, H. T. N., Kim, H., Lee, J. S., Eser, B. E. & Han, J. (2024). Flavonoids Biotransformation by Human Gut Bacterium Dorea sp. MRG-IFC3 Cell-Free Extract. Journal of Microbiology and Biotechnology, 34(6), 1270-1275. https://doi.org/10.4014/jmb.2403.03058

Larsen, C. K., Lindquist, P., Rosenkilde, M., Madsen, A. R., Haselmann, K., Glendorf, T., Olesen, K., Kodal, A. L. B. & Tørring, T. (2024). Using LanM Enzymes to Modify Glucagon-Like Peptides 1 and 2 in E. coli. ChemBioChem, 25(13), Artikel e202400201. https://doi.org/10.1002/cbic.202400201

Mathiasen, S. S., M. Kanta, J., Ploug Frydenberg, R., Lundsgaard, A., Guo, Z., M. Fritzen, A., Kiens, B., Wiking, L. & Kleinert, M. (2024). Novel methodology to enrich medium- and short-chain fatty acids in milk fat to improve metabolic health. Food & Function, 15(15), 7951-7960. https://doi.org/10.1039/D4FO00267A, https://doi.org/10.1039/d4fo00267a

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Wegener Kofoed, M. V. (2024). Dose-dependent effects of sodium dodecyl sulfate and hydrogen peroxide treatments on methane emission from pig manure during storage. Journal of Environmental Management, 364, Artikel 121415. https://doi.org/10.1016/j.jenvman.2024.121415

Junker, A., Christensen, F. M. S., Bai, L., Jørgensen, M. K., Fojan, P., Khalil, A. & Wei, Z. (2024). Emerging investigator series: photocatalytic treatment of PFAS in a single-step ultrafiltration membrane reactor. Environmental Science: Water Research & Technology, 10(9), 2062-2074. https://doi.org/10.1039/d4ew00224e

Lara, A. R., Kunert, F., Vandenbroucke, V., Taymaz-Nikerel, H., Martínez, L. M., Sigala, J. C., Delvigne, F., Gosset, G. & Büchs, J. (2024). Transport-controlled growth decoupling for self-induced protein expression with a glycerol-repressible genetic circuit. Biotechnology and Bioengineering, 121(6), 1789-1802. https://doi.org/10.1002/bit.28697

Bravo-Olín, J., Martínez-Carreón, S. A., Francisco-Solano, E., Lara, A. R. & Beltran-Vargas, N. E. (2024). Analysis of the role of perfusion, mechanical, and electrical stimulation in bioreactors for cardiac tissue engineering. Bioprocess and Biosystems Engineering, 47(6), 767-839. https://doi.org/10.1007/s00449-024-03004-5

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Kiens, B., Guo, Z. & Wiking, L. (2024). Novel milk fat fractions for health and functionality obtained by short-path distillation. LWT, 201, Artikel 116255. https://doi.org/10.1016/j.lwt.2024.116255

Palacios, P. A., Philips, J., Bentien, A. & Kofoed, M. V. W. (2024). Relevance of extracellular electron uptake mechanisms for electromethanogenesis applications. Biotechnology Advances, 73, 108369. Artikel 108369. https://doi.org/10.1016/j.biotechadv.2024.108369

Wang, F., Ouyang, Y., Zhou, P., Zhang, Y., Gao, R., Eser, B. E. & Guo, Z. (2024). NIR-accelerated cascade reaction for degradation of organophosphorus compounds by Au/PTE/ZIF-8: Cooperative effect and mechanism. Catalysis Science & Technology, 14(12), 3424-3435. https://doi.org/10.1039/D4CY00311J

Li, L., Liu, G. & Guo, Z. (2024). Oleogels Produced by Direct Methods Using as Gelator: Fatty Acids (Including 12-HSA), Fatty Alcohols, Ceramides, Lecithins, Sterols, Cellulose Fibers, and Fumed Silica. I C. Palla & F. Valoppi (red.), Advances in Oleogel Development, Characterization, and Nutritional Aspects (s. 177–207). Springer. https://doi.org/10.1007/978-3-031-46831-5_8

Lara, A. R., Utrilla, J., Martínez, L. M., Krausch, N., Kaspersetz, L., Hidalgo, D., Cruz-Bournazou, N., Neubauer, P., Sigala, J. C., Gosset, G. & Büchs, J. (2024). Recombinant protein expression in proteome-reduced cells under aerobic and oxygen-limited regimes. Biotechnology and Bioengineering, 121(4), 1216-1230. https://doi.org/10.1002/bit.28645

Zhang, G., Li, Z., Guo, Z. & Charalampopoulos, D. (2024). Comparative extraction of melon seed (Cucumis melo L.) oil by conventional and enzymatic methods: physicochemical properties and oxidative stability. Journal of Agriculture and Food Research, 16, Artikel 101182. https://doi.org/10.1016/j.jafr.2024.101182

Kleikamp, H. B. C., Palacios, P. A., Kofoed, M. V. W., Papacharalampos, G., Bentien, A. & Nielsen, J. L. (2024). The Selenoproteome as a Dynamic Response Mechanism to Oxidative Stress in Hydrogenotrophic Methanogenic Communities. Environmental Science & Technology, 58(15), 6637-6646. https://doi.org/10.1021/acs.est.3c07725

Kofoed, M. V. W. & Mørck Ottosen, L. D. (2023). Mikroorganismer omdanner menneskeskab CO₂. Aktuel Naturvidenskab, 2023(4), 13-16. https://aktuelnaturvidenskab.dk/find-artikel/nyeste-numre/4-2023/mikroorganismer-omdanner-menneskeskabt-co2

Romio, C., Kofoed, M. V. W. & Møller, H. B. (2023). Exploring increased hydraulic retention time as a cost-efficient way of valorizing residual biogas potential. Bioresource Technology, 387, 129646. Artikel 129646. https://doi.org/10.1016/j.biortech.2023.129646

Schütterle, D. M., Hegner, R., Temovska, M., Ortiz-Ardila, A. E. & Angenent, L. T. (2024). Exclusive D-lactate-isomer production during a reactor-microbiome conversion of lactose-rich waste by controlling pH and temperature. Water Research, 250, Artikel 121045. https://doi.org/10.1016/j.watres.2023.121045

dos Passos, N. H. M. & Ambye-Jensen, M. (2024). Fractionation of proteins from alfalfa juice at demonstration scale: Effects of temperature and centrifugation strategies on removal of green protein and recovery of the soluble white protein fraction. Separation and Purification Technology, 330(Part C), Artikel 125461. https://doi.org/10.1016/j.seppur.2023.125461

Oliveira, J. M. S., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Continuous biomethanation of flue gas-carbon dioxide using bio-integrated carbon capture and utilization. Bioresource Technology, 399, Artikel 130506. https://doi.org/10.1016/j.biortech.2024.130506

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Revideret 21.03.2023

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AU Engineering