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Institut for Bio- og Kemiteknologi

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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De Santis, P., Petrovai, N., Meyer, L-E., Hobisch, M. & Kara, S. (2022). A holistic carrier-bound immobilization approach for unspecific peroxygenase. Frontiers in chemistry, 10, [985997]. https://doi.org/10.3389/fchem.2022.985997

Petermeier, P., Bittner, J. P., Müller, S., Byström, E. & Kara, S. (2022). Design of a green chemoenzymatic cascade for scalable synthesis of bio-based styrene alternatives. Green Chemistry, 24(18), 6889-6899. https://doi.org/10.1039/d2gc01629j

Pourjafar, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2022). Construction, expression and functional characterization of an engineered antibody against tumor antigen MUC-1C. Protein Expression and Purification, 199, [106148]. https://doi.org/10.1016/j.pep.2022.106148

Andersen, F. D., Pedersen, K. D., Wilkens Juhl, D., Mygind, T., Chopin, P., B. Svenningsen, E., Poulsen, T. B., Braad Lund, M., Schramm, A., Gotfredsen, C. H. & Tørring, T. (2022). Triculamin: An Unusual Lasso Peptide with Potent Antimycobacterial Activity. Journal of Natural Products, 85(6), 1514-1521. https://doi.org/10.1021/acs.jnatprod.2c00065

Bogojevic, O., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2022). Designer phospholipids – structural retrieval, chemo-/bio- synthesis and isotopic labeling. Biotechnology Advances, 60, [108025]. https://doi.org/10.1016/j.biotechadv.2022.108025

Li, Z., Anankanbil, S., Li, L., Lyu, J., Nadzieja, M. & Guo, Z. (2023). Alkylsuccinylated oxidized cellulose-based amphiphiles as a novel multi-purpose ingredient for stabilizing O/W emulsions. Food Hydrocolloids, 134, [108014]. https://doi.org/10.1016/j.foodhyd.2022.108014

Ma, Y., Zhang, N., Vernet, G. & Kara, S. (2022). Design of Fusion Enzymes for Biocatalytic Applications in Aqueous and Non-aqueous Media. Frontiers in Bioengineering and Biotechnology, 10, [944226]. https://doi.org/10.3389/fbioe.2022.944226

Yang, T., Zhang, Y., Xu, L., Zhu, H., Zhang, J., Guo, Z., Huang, F. & Zheng, M. (2022). pH-Switchable Pickering Interfacial Biocatalysis: One-Pot Enzymatic Synthesis of Phytosterol Esters with Low-Value Rice Bran Oi. ACS Sustainable Chemistry & Engineering, 10(21), 6963–6972. https://doi.org/10.1021/acssuschemeng.1c08719

Bai, L., Jiang, Y., Xia, D., Wei, Z., Spinney, R., Dionysiou, D. D., Minakata, D., Xiao, R., Xie, H. B. & Chai, L. (2022). Mechanistic Understanding of Superoxide Radical-Mediated Degradation of Perfluorocarboxylic Acids. Environmental Science and Technology, 56(1), 624-633. https://doi.org/10.1021/acs.est.1c06356

de Jonge, N., Poulsen, J. S., Vechi, N. T., Kofoed, M. V. W. & Nielsen, J. L. (2022). Wood-Ljungdahl pathway utilisation during in situ H₂ biomethanation. Science of the total Environment, 806(Part 3), [151254]. https://doi.org/10.1016/j.scitotenv.2021.151254

Romio, C., Vedel Wegener Kofoed, M. & Bjarne Møller, H. (2022). Effect of ultrasonic and electrokinetic post-treatments on methane yield and viscosity of agricultural digestate. Bioresource Technology, 358, [127388]. https://doi.org/10.1016/j.biortech.2022.127388

Röllig, R., Paul, C. E., Duquesne, K., Kara, S. & Alphand, V. (2022). Exploring the temperature effect on enantioselectivity of a Baeyer-Villiger biooxidation by the 2,5-DKCMO module: The SLM approach. ChemBioChem, 23(15), [e202200293]. https://doi.org/10.1002/cbic.202200293

Neuzil-Bunesova, V., Ramirez Garcia, A., Modrackova, N., Makovska, M., Sabolova, M., Spröer, C., Bunk, B., Blom, J. & Schwab, C. (2022). Feed Insects as a Reservoir of Granadaene-Producing Lactococci. Frontiers in Microbiology, 13, [848490]. https://doi.org/10.3389/fmicb.2022.848490

Zhang, Y., Pedersen, J. N., Eser, B. E. & Guo, Z. (2022). Biodegradation of polyethylene and polystyrene: From microbial deterioration to enzyme discovery. Biotechnology Advances, 60, [107991]. https://doi.org/10.1016/j.biotechadv.2022.107991

Dai, R. & Guo, Z. (2022). Pd/Ni-Al hydrotalcite for base-free alcohol oxidation: Dependency of activity and selectivity on palladium precursors and reduction reagents. Molecular Catalysis , 526, [112403]. https://doi.org/10.1016/j.mcat.2022.112403

Xiao, R., Fu, Y., Bai, L., Chu, C., Ma, J., Wei, Z., Spinney, R., Dionysiou, D. D. & Pu, J. (2022). Kinetics and mechanistic aspects of superoxide radical-mediated transformation of ascorbate. Journal of Environmental Chemical Engineering, 10(3), [107736]. https://doi.org/10.1016/j.jece.2022.107736

Meyer, L-E., Andersen, M. B. & Kara, S. (2022). A Deep Eutectic Solvent Thermomorphic Multiphasic System for Biocatalytic Applications. Angewandte Chemie International Edition, 61(31), [e202203823]. https://doi.org/10.1002/anie.202203823

Yazdi, F. G., Dalgaard, L. B., Li, Q., Ruscheweyh, H-J., Thøgersen, R., Bertram, H. C. S., Hansen, M. & Schwab, C. (2022). Long-term daily high-protein, drained yoghurt consumption alters abundance of selected functional groups of the human gut microbiota and fecal short-chain fatty acid profiles in a cohort of overweight and obese women. Journal of Functional Foods, 93, [105089]. https://doi.org/10.1016/j.jff.2022.105089

Dalby, F. R., Guldberg, L. B., Feilberg, A. & Kofoed, M. V. W. (2022). Reducing greenhouse gas emissions from pig slurry by acidification with organic and inorganic acids. PLOS ONE, 17(5), [e0267693]. https://doi.org/10.1371/journal.pone.0267693

Bai, L., Jiang, Y., Xia, D., Wei, Z., Spinney, R., Dionysiou, D. D., Minakata, D., Xiao, R., Xie, H. B. & Chai, L. (2022). Response to Comment on "mechanistic Understanding of Superoxide Radical-Mediated Degradation of Perfluorocarboxylic Acids". Environmental Science and Technology, 56(8), 5289-5291. https://doi.org/10.1021/acs.est.2c01335

Bai, L., He, L., Fu, Y., Chu, C., Wei, Z., Spinney, R., Dionysiou, D. D., Liang, Y. & Xiao, R. (2022). New insight to superoxide radical-mediated degradation of pentachlorophenate: Kinetic determination and theoretical calculations. Chemical Communications, 58(16), 2666-2669. https://doi.org/10.1039/d1cc06834b

Irla, M. & Wendisch, V. F. (2022). Efficient cell factories for the production of N-methylated amino acids and for methanol-based amino acid production. Microbial Biotechnology, 15(8), 2145-2159. https://doi.org/10.1111/1751-7915.14067

Lyu, J., Zhang, J., Zhu, J., Chen, S., Han, T., Zhang, Y., Gao, R., Xie, G. & Guo, Z. (2022). Molecular dynamics simulation guided distal mutation of Thermotoga naphthophila β-glucosidase for significantly enhanced synthesis of galactooligosaccharides and expanded product scope. International Journal of Biological Macromolecules, 210, 21-32. https://doi.org/10.1016/j.ijbiomac.2022.05.002

Huang, Z., Guo, S., Guo, Z., He, Y. & Chen, B. (2022). Integrated green one-step strategy for concurrent recovery of phycobiliproteins and polyunsaturated fatty acids from wet Porphyridium biomass. Food Chemistry, 389, [133103]. https://doi.org/10.1016/j.foodchem.2022.133103

Milic, M., Byström, E., Domínguez de María, P. & Kara, S. (2022). Enzymatic Cascade for the Synthesis of 2,5-Furandicarboxylic Acid in Biphasic and Microaqueous Conditions: ‘Media-Agnostic’ Biocatalysts for Biorefineries. ChemSusChem, 15(9), [e202102704]. https://doi.org/10.1002/cssc.202102704

Tang, T., Li, Q., Huang, Z., Wu, Y., Yan, B., Zhao, J., Zhang, H., Chen, W. & Fan, D. (2022). Evaluation of Shandong pancake with sourdough fermentation on the alleviation of type 2 diabetes symptoms in mice. Journal of Functional Foods, 90, [104952]. https://doi.org/10.1016/j.jff.2022.104952

Rodriguez, J. M. O., Wacklin-Knecht, H. P., Clifton, L. A., Bogojevic, O., Leung, A., Fragneto, G. & Knecht, W. (2022). New Insights into the Interaction of Class II Dihydroorotate Dehydrogenases with Ubiquinone in Lipid Bilayers as a Function of Lipid Composition. International Journal of Molecular Sciences , 23(5), [2437]. https://doi.org/10.3390/ijms23052437

Liu, G., Bogojevic, O., Pedersen, J. N. & Guo, Z. (2022). Edible oleogels as solid fat alternatives: Composition and oleogelation mechanism implications. Comprehensive Reviews in Food Science and Food Safety, 21(3), 2077-2104. https://doi.org/10.1111/1541-4337.12928

Xie, D., Ji, X., Dai, Y., He, Y., Sun, H., Guo, Z., Yang, Y., Zheng, X. & Chen, B. (2022). Chlorella vulgaris cultivation in pilot-scale to treat real swine wastewater and mitigate carbon dioxide for sustainable biodiesel production by direct enzymatic transesterification. Bioresource Technology, 349, [126886]. https://doi.org/10.1016/j.biortech.2022.126886

Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T. M. B., Wendisch, V. F. & Brautaset, T. (2017). L-lysine production by Bacillus methanolicus: Genome-based mutational analysis and L-lysine secretion engineering. Journal of Biotechnology, 244, 25-33. https://doi.org/10.1016/j.jbiotec.2017.02.001

Klein, V. J., Irla, M., López, M. G., Brautaset, T. & Brito, L. F. (2022). Unravelling Formaldehyde Metabolism in Bacteria: Road towards Synthetic Methylotrophy. Microorganisms, 10(2), [220]. https://doi.org/10.3390/microorganisms10020220

Ng, K-S., Chang, Y-C., Chen, Y-P., Lo, Y-H., Wang, S-Y. & Chen, M-J. (2022). Characterization of exopolysaccharide-producing lactic acid bacteria from Taiwanese ropy fermented milk and their application in low-fat fermented milk. Animal Bioscience, 35(2), 281-289. https://doi.org/10.5713/ab.21.0251

Wang, S-Y., Huang, R-F., Ng, K-S., Chen, Y-P., Shiu, J-S. & Chen, M-J. (2021). Co-Culture Strategy of Lactobacillus kefiranofaciens HL1 for Developing Functional Fermented Milk. Foods, 10(9), 2098. https://doi.org/10.3390/foods10092098

Khider, M. L. K., Brautaset, T. & Irla, M. (2021). Methane monooxygenases: central enzymes in methanotrophy with promising biotechnological applications. World Journal of Microbiology and Biotechnology, 37(4), [72]. https://doi.org/10.1007/s11274-021-03038-x

Irla, M., Hakvåg, S. & Brautaset, T. (2021). Developing a riboswitch-mediated regulatory system for metabolic flux control in thermophilic bacillus methanolicus. International Journal of Molecular Sciences , 22(9), [4686]. https://doi.org/10.3390/ijms22094686

Brito, L. F., Irla, M., Nærdal, I., Le, S. B., Delépine, B., Heux, S. & Brautaset, T. (2021). Evaluation of Heterologous Biosynthetic Pathways for Methanol-Based 5-Aminovalerate Production by Thermophilic Bacillus methanolicus. Frontiers in Bioengineering and Biotechnology, 9, [686319]. https://doi.org/10.3389/fbioe.2021.686319

Gruenberg, M., Irla, M., Myllek, S. & Draths, K. (2021). Characterization of two 3-deoxy-D-Arabino-Heptulosonate 7-phosphate synthases from Bacillus methanolicus. Protein Expression and Purification, 188, [105972]. https://doi.org/10.1016/j.pep.2021.105972

Zhang, N., Müller, B., Kirkeby, T. Ø., Kara, S. & Loderer, C. (2022). Development of a thioredoxin based cofactor regeneration system for NADPH-dependent oxidoreductases. ChemCatChem, 14(7), [e202101625]. https://doi.org/10.1002/cctc.202101625

Meyer, J., Meyer, L-E. & Kara, S. (2022). Enzyme immobilization in hydrogels: A perfect liaison for efficient and sustainable biocatalysis. Engineering in Life Sciences, 22(3-4), 165-177. https://doi.org/10.1002/elsc.202100087

Zhang, Y., Breum, N. M. D., Schubert, S., Hashemi, N., Kyhnau, R., Knauf, M. S., Mathialakan, M., Takeuchi, M., Kishino, S., Ogawa, J., Kristensen, P., Guo, Z. & Eser, B. E. (2022). Semi-rational Engineering of a Promiscuous Fatty Acid Hydratase for Alteration of Regioselectivity. ChemBioChem, 23(4), [e202100606]. https://doi.org/10.1002/cbic.202100606

Asare, P. T., Greppi, A., Pennacchia, A., Brenig, K., Geirnaert, A., Schwab, C., Stephan, R. & Lacroix, C. (2021). In vitro Modeling of Chicken Cecal Microbiota Ecology and Metabolism Using the PolyFermS Platform. Frontiers in Microbiology, 12, [780092]. https://doi.org/10.3389/fmicb.2021.780092

Bittner, J. P., Zhang, N., Huang, L., Domínguez de María, P., Jakobtorweihen, S. & Kara, S. (2022). Impact of deep eutectic solvents (DESs) and individual DES components on alcohol dehydrogenase catalysis: Connecting experimental data and molecular dynamics simulations. Green Chemistry, 24(3), 1120-1131. https://doi.org/10.1039/D1GC04059F

Sieborg, M. U., Jensen, M. B., Jensen, B. & Kofoed, M. V. W. (2021). Effect of minimizing carrier irrigation on H₂ conversion in trickle bed reactors during ex situ biomethanation. Bioresource Technology Reports, 16, [100876]. https://doi.org/10.1016/j.biteb.2021.100876

Alvarez, M. V., Bambace, M. F. & del Rosario Moreira, M. (2019). Arándanos como alternativa no láctea en alimentos funcionales. Editorial Académica Española. EAE. https://www.eae-publishing.com/catalog/details/store/gb/book/978-620-0-33162-5/ar%C3%A1ndanos-como-alternativa-no-l%C3%A1ctea-en-alimentos-funcionales

Bambace, M. F., V. Alvarez, M. & del Rosario Moreira, M. (2021). Ready-to-eat blueberries as fruit-based alternative to deliver probiotic microorganisms and prebiotic compounds. LWT, 142, [111009]. https://doi.org/10.1016/j.lwt.2021.111009

Bambace, M. F., del Rosario Moreira, M., Sánchez-Moreno, C. & De Ancos, B. (2021). Effects of combined application of high-pressure processing and active coatings on phenolic compounds and microbiological and physicochemical quality of apple cubes. Journal of the Science of Food and Agriculture, 101(10), 4256-4265. https://doi.org/10.1002/jsfa.11065

Alvarez, M. V., Bambace, M. F., Quintana, G., Gomez-Zavaglia, A. & del Rosario Moreira, M. (2021). Prebiotic-alginate edible coating on fresh-cut apple as a new carrier for probiotic lactobacilli and bifidobacteria. LWT, 137, [110483]. https://doi.org/10.1016/j.lwt.2020.110483

Bambace, M. F., Alvarez, M. V. & del Rosario Moreira, M. (2019). Novel functional blueberries: Fructo-oligosaccharides and probiotic lactobacilli incorporated into alginate edible coatings. Food Research International, 122, 653-660. https://doi.org/10.1016/j.foodres.2019.01.040

Bambace, M. F., V. Alvarez, M. & del Rosario Moreira, M. (2019). Prebiotic edible coatings with biopreservatives: Quality and safety of fresh apple cubes. Journal of Food Process Engineering, 42(2), [e12971]. https://doi.org/10.1111/jfpe.12971

Bambace, M. F., Gerard, L. M. & del Rosario Moreira, M. (2018). An approach to improve the safety and quality of ready-to-eat blueberries. Journal of Food Safety, 39(2). https://doi.org/10.1111/jfs.12602

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Revideret 06.09.2022

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AU Engineering