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Department of Biological and Chemical Engineering

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Zhang, N., Domínguez de María, P. & Kara, S. (2024). Biocatalysis for the Synthesis of Active Pharmaceutical Ingredients in Deep Eutectic Solvents: State-of-the-Art and Prospects. Catalysts, 14(1), Article 84. https://doi.org/10.3390/catal14010084

Sieborg, M. U., Santos Oliveira, J. M., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Flue-to-fuel: Bio-integrated carbon capture and utilization of dilute carbon dioxide gas streams to renewable methane. Energy Conversion and Management, 302, Article 118090. https://doi.org/10.1016/j.enconman.2024.118090

Zhou, P., Zhang, Y., Liu, W., Jones, N. C., Hoffmann, S. V., Eser, B. E., Zhang, M., Ouyang, Y., Wang, F., Deng, Y., Zhang, M. & Guo, Z. (2024). Effect of Deep Eutectic Mixtures in Hydroxylation of Fatty Acids: A Correlation between Water Activity and Thermostability of FA-HY1. ACS Sustainable Chemistry & Engineering, 12(5), 1918-1929. https://doi.org/10.1021/acssuschemeng.3c05867

Lopez-Rodulfo, I. M., Tsochatzis, E. D., Stentoft, E. W., Martinez-Carrasco, P., Bechtner, J. D. & Martinez, M. M. (2024). Partitioning and in vitro bioaccessibility of apple polyphenols during mechanical and physiological extraction: A hierarchical clustering analysis with LC-ESI-QTOF-MS/MS. Food Chemistry, 441, Article 138320. https://doi.org/10.1016/j.foodchem.2023.138320

Bogojevic, O., Johnsen, N. K., Arevång, C. & Guo, Z. (2023). Ionic Liquid-Mediated Biocatalytic Synthesis of α-Lipoic Acid-Containing Phospholipids: Reaction System Engineering beyond Green Chemistry. ACS Sustainable Chemistry and Engineering, 11(51), 17920-17929. https://doi.org/10.1021/acssuschemeng.3c04234

Stødkilde, L., Ingerslev, A. K., Ambye-Jensen, M. & Jensen, S. K. (2024). The composition and nutritional quality of biorefined lucerne protein depend on precipitation method. Journal of the Science of Food and Agriculture, 104(6), 3405-3412. https://doi.org/10.1002/jsfa.13226

Billing, A. M., Kim, Y. C., Gullaksen, S., Schrage, B., Raabe, J., Hutzfeldt, A., Demir, F., Kovalenko, E., Lassé, M., Dugourd, A., Fallegger, R., Klampe, B., Jaegers, J., Li, Q., Kravtsova, O., Crespo-Masip, M., Palermo, A., Fenton, R. A., Hoxha, E. ... Rinschen, M. M. (2024). Metabolic Communication by SGLT2 Inhibition. Circulation, 149(11), 860-884. https://doi.org/10.1161/CIRCULATIONAHA.123.065517

Bogojevic, O., Zhang, Y., Wolff, C. D., Johnsen, N. K., Arevång, C. & Guo, Z. (2024). A Chemo-Enzymatic Cascade Strategy for the Synthesis of Phosphatidylcholine Incorporated with Structurally Diverse FAHFAs. The Journal of Organic Chemistry, 89(2), 1035-1044. https://doi.org/10.1021/acs.joc.3c02131

Philips, J., Procopio, L. & Marshall, I. P. G. (2023). Insights into the various mechanisms by which Shewanella spp. induce and inhibit steel corrosion. npj Materials Degradation, 7(1), Article 95. https://doi.org/10.1038/s41529-023-00416-8

Khazaee, Z., Ouyang, Y., Zhang, Y., Bogojevic, O., Plesner, T. J. & Guo, Z. (2024). Stacked Covalent Organic Ribbons Perpendicular to Graphene Oxide Sheets: a 1D-p-2D Design for Photocatalytic Tandem Reactions. Chemistry - A European Journal, 30(12), Article e202303615. https://doi.org/10.1002/chem.202303615

Ingribelli, E., Modrackova, N., Tejnecky, V., Killer, J., Schwab, C. & Neuzil-Bunesova, V. (2023). Culture-dependent screening of endospore-forming clostridia in infant feces. BMC Microbiology, 23, Article 347. https://doi.org/10.1186/s12866-023-03104-4

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Effects of surfactant, oxidant, and flocculant treatments on methane emission from pig slurry during storage. Journal of Cleaner Production, 430, Article 139665. https://doi.org/10.1016/j.jclepro.2023.139665

Gkantzou, E., Weinhart, M. & Kara, S. (2023). 3D printing for flow biocatalysis. RSC Sustainability, 1(7), 1672-1685. https://doi.org/10.1039/d3su00155e

Palacios, P. A., Kleikamp, H., Nielsen, J. L., Jensen, M. B., Bentien, A. & Kofoed, M. V. W. (2023). Quinone-mediated extracellular electron transfer processes in ex situ biomethanation reactors. Bioresource Technology Reports, 24, Article 101671. https://doi.org/10.1016/j.biteb.2023.101671

Busk, M., Eggertsen, P. P., Overgaard, J., Horsman, M. R., Tørring, T., Jacobsen, K. M. & Poulsen, T. B. (2023). In Vitro Characterization of the Bacteria-derived Hypoxia-selective Cytotoxin BE-₄₃₅₄₇. Anticancer Research, 43(12), 5319-5329. https://doi.org/10.21873/anticanres.16735

Kuipers, S. B. & Kofoed, M. V. W. (2023). Biomethanation of syngas in packed bed reactors: A study of adaptation and microbial pathways in a thermophilic mixed consortium. Bioresource Technology Reports, 24, Article 101667. https://doi.org/10.1016/j.biteb.2023.101667

Dai, R., Dai, C., Hou, S., He, Q., Liu, B., Huang, M., Jiang, H., Li, M. H., Pan, L., Guo, Z., Kim, J., Han, M., Yamauchi, Y. & Xu, X. (2023). Opportunities and challenges of hydrotalcite-related electrocatalysts for seawater splitting: a systematic perspective from materials synthesis, characterization and application. Journal of Materials Chemistry A, 11(38), 20383-20407. https://doi.org/10.1039/d3ta02524a

Cheng, W., Yu, B., Zheng, Y., Yang, P., Ke, Z., Zhou, X., Guo, Z., Xu, X., Ding, Y. & Liu, S. (2024). Chemical enrichment of conjugated linoleic acid in cottonseed oil using ruthenium nanoparticle immobilized on chemically modified multiwalled carbon nanotube as heterogeneous nanocatalyst. Journal of the American Oil Chemists' Society, 101(11), 1133-1143. https://doi.org/10.1002/aocs.12785

Zhou, P., Liu, W., Zhang, Y., Liu, G., Zhao, Z., Zhang, M., Wei , Z., Zhang, Y., Tang, X., Li, P., Deng, Y., Zhang, M. & Guo, Z. (2023). Tuning multi-purpose glycerol-based deep eutectic solvents for biocatalytic deacidification of high-acid rice bran oil: Kinetics, mechanism, and inhibition of side glycerolysis. LWT - Food Science and Technology, 189, Article 115535. https://doi.org/10.1016/j.lwt.2023.115535

Engelbrecht, N., Sieborg, M. U., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Metabolic heat production impacts industrial upscaling of ex situ biomethanation trickle-bed reactors. Energy Conversion and Management, 299, Article 117769. https://doi.org/10.1016/j.enconman.2023.117769

Xiong, X., Wu, F., Ouyang, Y., Liu, Y., Wang, Z., Tian, H. & Dong, M. (2024). Oxygen Incorporated MoS₂ for Rectification-Mediated Resistive Switching and Artificial Neural Network. Advanced Functional Materials, 34(15), Article 2213348. https://doi.org/10.1002/adfm.202213348

Marietou, A., Schmidt, J. S., Rasmussen, M. R., Scoma, A., Rysgaard, S. & Vergeynst, L. (2023). The effect of hydrostatic pressure on the activity and community composition of hydrocarbon-degrading bacteria in Arctic seawater. Applied and Environmental Microbiology, 89(11), Article e0098723. https://doi.org/10.1128/aem.00987-23

Zoppi, G., Andrade, T. A., Ward, A. J., Ambye-Jensen, M. & Biller, P. (2023). Biorefinery integration of a green protein platform for maximum resource utilization. Cleaner and Circular Bioeconomy, 6, Article 100064. https://doi.org/10.1016/j.clcb.2023.100064

Sieborg, M. U., Engelbrecht, N., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Sunshine-to-fuel: Demonstration of coupled photovoltaic-driven biomethanation operation, process, and techno-economical evaluation. Energy Conversion and Management, 299, Article 117767. https://doi.org/10.1016/j.enconman.2023.117767

Schweigerdt, A., D. Stöbener, D., Schäfer, A., Kara, S. & Weinhart, M. (2023). Impact of Amphiphilicity Balance in Hydroxy-Functional, Isomeric, Thermoresponsive Poly(meth)acrylates. Macromolecules, 8602-8613. https://doi.org/10.1021/acs.macromol.3c01251

Allan Andrade, T., Ramírez-Márquez, C. & Ambye-Jensen, M. (2023). Process simulation of an integrated green protein biorefinery using nanofiltration membrane and ethanol fermentation. Separation and Purification Technology, 327, Article 124887. https://doi.org/10.1016/j.seppur.2023.124887

Chan, S. W. S., Marami, H., Tayo, L. L., Fog, E., Andrade, T. A., Ambye-Jensen, M., Birkved, M. & Khoshnevisan, B. (2024). Environmental impacts of a novel biorefinery platform integrated with power-to-protein technology to decrease dependencies on soybean imports. Science of the Total Environment, 907, Article 167943. https://doi.org/10.1016/j.scitotenv.2023.167943

Choi, J., Kim, Y., Eser, B. E. & Han, J. (2023). Theoretical study on the glycosidic C-C bond cleavage of 3''-oxo-puerarin. Scientific Reports, 13(1), Article 16282. https://doi.org/10.1038/s41598-023-43379-1

Shen, W., A. Dalby, P., Guo, Z., Li, W., Zhu, C. & Fan, D. (2023). Residue Effect-Guided Design: Engineering of S. Solfataricus β-Glycosidase to Enhance Its Thermostability and Bioproduction of Ginsenoside Compound K. Journal of Agricultural and Food Chemistry, 71(44), 16669–16680. https://doi.org/10.1021/acs.jafc.3c04575

Ramirez Garcia, A., Greppi, A., Constancias, F., Ruscheweyh, H.-J., Gasser, J., Hurley, K., Sturla, S. J., Schwab, C. & Lacroix, C. (2023). Anaerobutyricum hallii promotes the functional depletion of a food carcinogen in diverse healthy fecal microbiota. Frontiers in Microbiomes, 2, Article 1194516. https://doi.org/10.3389/frmbi.2023.1194516

Høgsgaard, K., Vidal, N. P., Marietou, A., Fiehn, O. G., Li, Q., Bechtner, J., Catalano, J., Martinez, M. M. & Schwab, C. (2023). Fucose modifies short chain fatty acid and H2S formation through alterations of microbial cross-feeding activities. FEMS Microbiology Ecology, 99(10), Article fiad107. https://doi.org/10.1093/femsec/fiad107

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Kiens, B., Guo, Z. & Wiking, L. (2023). Novel milk fat fractions for health and functionality obtained by short path distillation.

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Mitigation of methane emission from pig slurry storage with sodium dodecyl sulfate and hydrogen peroxide treatments. 222. Poster session presented at RAMIRAN, Cambridge, United Kingdom.

Yesiltas, B., Garcia-Moreno, P. J., Sørensen, A.-D. M., Banerjee, C., Anankanbil, S., Guo, Z., Ogilby, P. R. & Jacobsen, C. (2023). The Use of Soy and Egg Phosphatidylcholines Modified with Caffeic Acid Enhances the Oxidative Stability of High-Fat (70%) Fish Oil-in-Water Emulsions. Colloids and Interfaces , 7(3), Article 60. https://doi.org/10.3390/colloids7030060

Dalby, F. R., Ambrose, H. W., Poulsen, J. S., Nielsen, J. J. L. & Adamsen, A. P. S. (2023). Pig slurry organic matter transformation and methanogenesis at ambient storage temperatures. Journal of Environmental Quality, 52(6), 1139-1151. https://doi.org/10.1002/jeq2.20512

Domínguez de María, P., Kara, S. & Gallou, F. (2023). Biocatalysis in Water or in Non-Conventional Media? Adding the CO2 Production for the Debate. Molecules, 28(18), Article 6452. https://doi.org/10.3390/molecules28186452

Huertas-Díaz, L., Kyhnau, R., Ingribelli, E., Neuzil-Bunesova, V., Li, Q., Sasaki, M., Lauener, R. P., Roduit, C., Frei, R., CK-CARE study group, Sundekilde, U. & Schwab, C. (2023). Breastfeeding and the major fermentation metabolite lactate determine occurrence of Peptostreptococcaceae in infant feces. Gut Microbes, 15(1), Article 2241209. https://doi.org/10.1080/19490976.2023.2241209

Pourjafar, M., Saidijam, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2023). Surfaceome Profiling Suggests Potential of Anti-MUC1×EGFR Bispecific Antibody for Breast Cancer Targeted Therapy. Journal of Immunotherapy, 46(7), 245-261. https://doi.org/10.1097/CJI.0000000000000482

Gylling, M., Nord-Larsen, T., Bruhn, A., Thomsen, M., Ambye-Jensen, M., Mortensen, E. Ø. & Jørgensen, U. (2023). Potential Danish biomass production and utilization in 2030. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA Report No. 219 https://dcapub.au.dk/djfpublikation/djfpdf/DCArapport219.pdf

Tesson, S. V. M., Barbato, M. & Rosati, B. (2023). Aerosolization flux, bio-products, and dispersal capacities in the freshwater microalga Limnomonas gaiensis (Chlorophyceae). Communications Biology, 6(1), Article 809. https://doi.org/10.1038/s42003-023-05183-5

Vaupel, S., Mau, R., Kara, S., Seitz, H., Kragl, U. & Meyer, J. (2023). 3D printed and stimulus responsive drug delivery systems based on synthetic polyelectrolyte hydrogels manufactured via digital light processing. Journal of Materials Chemistry B, 28(11), 6547-6559. https://doi.org/10.1039/D3TB00285C

De Santis, P., Wegstein, D., O. Burek, B., Patzsch, J., Alcalde, M., Kroutil, W., Z. Bloh, J. & Kara, S. (2023). Robust Light Driven Enzymatic Oxyfunctionalization Via Immobilization of Unspecific Peroxygenase. ChemSusChem, 16(23), Article e202300613. https://doi.org/10.1002/cssc.202300613

Röllig, R., Paul, C. E., Rousselot-Pailley, P., Kara, S. & Alphand, V. (2023). Hybrid catalysis for enantioselective Baeyer-Villiger oxidation and stereoselective epoxidation: A Cp*Ir complex to fuel FMN and FAD reduction for flavoprotein monooxygenase modules. Reaction Chemistry & Engineering , 8(12), 3117-3123. https://doi.org/10.1039/d3re00411b

Jopp, S., Fleischhammer, T., Lavrentieva, A., Kara, S. & Meyer, J. (2023). Synthesis, biocompatibility, and antimicrobial properties of glucose-based ionic liquids. RSC Sustainability, 1(7), 1751-1764. https://doi.org/10.1039/d3su00191a

Zong, L., Zhang, Y., Shao, Z., Ljubic, A., Jacobsen, C., Gao, R., Eser, B. E., Wang, Y., Wang, Y. & Guo, Z. (2023). Selective and Sustainable Production of Sub-terminal Hydroxy Fatty Acids by a Self-Sufficient CYP102 Enzyme from Bacillus Amyloliquefaciens. ChemBioChem, 24(18), Article e202300368. https://doi.org/10.1002/cbic.202300368

Zhang, Y., Plesner, T. J., Ouyang, Y., Zheng, Y.-C., Bouhier, E., Ingemann Berentzen, E., Zhang, M., Zhou, P., Zimmermann , W., Andersen, G. R. & Guo, Z. (2023). Computer-aided discovery of a novel thermophilic laccase for low-density polyethylene degradation. Journal of Hazardous Materials, 458, Article 131986. https://doi.org/10.1016/j.jhazmat.2023.131986

Sieborg, M. U., Ottosen, L. D. M. & Kofoed, M. V. W. (2023). Enhanced process control of trickle-bed reactors for biomethanation by vertical profiling directed by hydrogen microsensor monitoring. Bioresource Technology, 384, Article 129242. https://doi.org/10.1016/j.biortech.2023.129242

Ye, S., Cheng, Y., Guo, Z., Wang, X. & Wei , W. (2023). A Lipid Toolbox of Sugar Alcohol Fatty Acid Monoesters for Single-component Lipid Nanoparticles with Temperature-controlled Release. Colloids and Surfaces B: Biointerfaces, 228, Article 113426. https://doi.org/10.1016/j.colsurfb.2023.113426

Wollesen, M., Mikkelsen, K., Tvilum, M. S., Vestergaard, M., Wang, M., Meyer, R. L., Ingmer, H., Poulsen, T. & Tørring, T. (2023). Polyether Ionophore Antibiotics Target Drug-Resistant Clinical Isolates, Persister Cells, and Biofilms. Microbiology Spectrum, 11(4), Article e0062523. https://doi.org/10.1128/spectrum.00625-23

Bogojevic, O., Zhang, Y., Wolff, C. D., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). A sustainable and regioselective synthesis of Hemi-bis(monoacylglycero)phosphates and bis(diacylglycero)phosphates. iScience, 26(7), Article 107075. https://doi.org/10.1016/j.isci.2023.107075

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