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Department of Biological and Chemical Engineering

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Kara, S., Anton, F., Solle, D., Neumann, M., Hitzmann, B., Scheper, T. & Liese, A. (2010). Fluorescence spectroscopy as a novel method for online analysis of biocatalytic C–C bond formations. Journal of Molecular Catalysis B: Enzymatic, 66, 124-129.

Kara, S., J. Mueller, J. & Liese, A. (2011). Online analysis methods for monitoring of bioprocesses. Chimica Oggi-Chemistry Today, 29(2), 38-41. https://www.researchgate.net/publication/234015522_Online_analysis_methods_for_monitoring_of_bioprocesses

Peper, S., Kara, S., Sing Long, W., Liese, A. & Niemeyer, B. (2011). Immobilization and characterization of benzoylformate decarboxylase from Pseudomonas putida on spherical silica. Bioprocess and Biosystems Engineering, 34(6), 671-680. https://doi.org/10.1007/s00449-011-0516-0

Kara, S., Sing Long, W., Berheide, M., Peper, S., Niemeyer, B. & Liese, A. (2011). Influence of reaction conditions on the enantioselectivity of biocatalyzed C–C bond formations under high pressure conditions. Journal of Biotechnology, 152(3), 87-92. https://doi.org/10.1016/j.jbiotec.2011.01.020

Könst, P., Merkens, H., Kara, S., Kochius, S., Vogel, A., Zuhse, R., Holtmann, D., Arends, I. W. C. E. & Hollmann, F. (2012). Enantioselective oxidation of aldehydes catalyzed by alcohol dehydrogenase. Angewandte Chemie, 51(48), 9914-9917. https://doi.org/10.1002/anie.201203219

Könst, P., Kara, S., Kochius, S., Holtmann, D., Arends, I. W. C. E., Ludwig, R. & Hollmann, F. (2013). Expanding the scope of laccase-mediator systems. ChemCatChem, 5(10), 3027-3032. https://doi.org/10.1002/cctc.201300205

Kara, S., Spickermann, D., Schrittwieser, J. H., Leggewie, C., van Berkel, W. J. H., Arends, I. W. C. E. & Hollmann, F. (2012). More efficient redox biocatalysis by utilising 1,4-butanediol as a ‘smart cosubstrate’. Green Chemistry and Sustainable Technology, 15, 330-335. https://doi.org/10.1039/C2GC36797A

Schrittwieser, J. H., Coccia, F., Kara, S., Grischek, B., Kroutil, W., dÁlessandro, N. & Hollmann, F. (2013). One-pot combination of enzyme and Pd nanoparticle catalysis for the synthesis of enantiomerically pure 1,2-amino alcohols. Green Chemistry, 15, 3318-3331. https://doi.org/10.1039/C3GC41666F

Kara, S., Schrittwieser, J. H. & Hollmann, F. (2013). Strategies for cofactor regeneration in biocatalyzed reductions. In E. Brenna (Ed.), Synthetic Methods for Biologically Active Molecules: Exploiting the Potential of Bioreductions (pp. 209-238). Wiley-VCH Verlag GmbH. https://doi.org/10.1002/9783527665785.ch08

Kara, S., Spickermann, D., Schrittwieser, J. H., Weckbecker, A., Leggewie, C., Arends, I. W. C. E. & Hollmann, F. (2013). Access to lactone building blocks via horse liver alcohol dehydrogenase-catalyzed oxidative lactonization. A C S Catalysis, 3(11), 2536-2439. https://doi.org/10.1021/cs400535c

Kara, S., Schrittwieser, J. H., Hollmann, F. & B. Ansorge-Schumacher, M. (2014). Recent trends and novel concepts in cofactor-dependent biotransformations. Applied Microbiology and Biotechnology, 98(4), 1517-1529. https://doi.org/10.1007/s00253-013-5441-5

Hollmann, F. & Kara, S. (2014). Biokatalyse in unkonventionellen Reaktionsmedien. BioSpektrum, 20(1), 100-102. https://doi.org/10.1007/s12268-014-0412-7

Spickermann, D., Kara, S., Barackov, I., Hollmann, F., Schwaneberg, U., Dünkelmann, P. & Leggewie, C. (2014). Enzyme stabilization by additives under industrial relevant reaction conditions. Journal of Molecular Catalysis B: Enzymatic, 103, 24-28.

Bisagni, S., Summers, B., Kara, S., Hatti-Kaul, R., Grogan, G., Mamo, G. & Hollmann, F. (2014). Exploring the substrate specificity and enantioselectivity of a Baeyer-Villiger monooxygenase from Dietzia sp. D5: oxidation of sulfides and aldehydes. Topics in Catalysis, 57(5), 366-375. https://doi.org/10.1007/s11244-013-0192-1

Kara, S., Spickermann, D., Weckbecker, A., Leggewie, C., Arends, I. W. C. E. & Hollmann, F. (2014). Bioreductions catalyzed by an alcohol dehydrogenase in non-aqueous media. ChemCatChem, 6, 973-976. https://doi.org/10.1002/cctc.201300841

Kochius, S., Ni, Y., Kara, S., Gargiulo, S., Schrader, J., Holtmann, D. & Hollmann, F. (2014). Light-accelerated biocatalytic oxidation reactions. ChemPlusChem, 79(11), 1554-1557. https://doi.org/10.1002/cplu.201402152

Petrenz, A., Dominguez De Maria, P., Ramanathan, A., Hanefeld, U., B. Ansorge-Schumacher, M. & Kara, S. (2014). Medium and reaction engineering for the establishment of a chemo-enzymatic dynamic kinetic resolution of rac-benzoin in batch and continuous mode. Journal of Molecular Catalysis B: Enzymatic, 114, 42-49. https://doi.org/10.1016/j.molcatb.2014.10.011

Berheide, M., Kara, S. & Liese, A. (2015). Reversibility of asymmetric catalyzed C–C Bond formation by benzoylformate decarboxylase. Catalysis Science & Technology, 5, 2418-2426. https://doi.org/10.1039/C4CY00171K

Zuhse, R., Leggewie, C., Hollmann, F. & Kara, S. (2015). Scaling-up of 'smart cosubstrate' 1,4-butanediol promoted asymmetric reduction of ethyl-4,4,4-trifluoroacetoacetate in organic media. Organic Process Research & Development, 19(2), 369-372. https://doi.org/10.1021/op500374x

Kara, S., Schrittwieser, J. H., Gargiulo, S., Ni, Y., Yanase, H., Opperman, D. J. & van Berkel, W. J. H. (2015). Complete enzymatic oxidation of methanol to carbon dioxide: Towards more eco-efficient regeneration systems for reduced nicotinamide cofactors. Advanced Synthesis & Catalysis, 357(8), 1687-1691. https://doi.org/10.1002/adsc.201500173

Bornadel, A., Hatti-Kaul, R., Hollmann, F. & Kara, S. (2015). A bi-enzymatic convergent cascade for ε‐Caprolacton synthesis employing 1,6-hexanediol as a ‘double-smart cosubstrate. ChemCatChem, 7, 2442-2445. https://doi.org/10.1002/cctc.201500511

Bornadel, A., Hatti-Kaul, R., Hollmann, F. & Kara, S. (2016). Enhancing the productivity of the bi-enzymatic convergent cascade for ɛ-caprolactone synthesis through design of experiments and a biphasic system. Tetrahedron, 72(46), 7222-7228. https://doi.org/10.1016/j.tet.2015.11.054

pesci, L., Kara, S. & Liese, A. (2016). Evaluation of the substrate scope of benzoic acid (de)carboxylases according to chemical and biochemical parameters. ChemBioChem, 17(19), 1845-1850. https://doi.org/10.1002/cbic.201600333

Scherkus, C., Schmidt, S., T. Bornscheuer, U., Gröger, H., Kara, S. & Liese, A. (2016). A fed-batch synthetic strategy for a multi-enzymatic synthesis of Poly‐ϵ‐caprolactone. ChemCatChem, 8(22), 3446-3452. https://doi.org/10.1002/cctc.201600806

Rauch, M., Schmidt, S., Arends, I. W. C. E., Oppelt, K., Kara, S. & Hollmann, F. (2017). Photocatalytic alcohol oxidation using LED light sources. Green Chemistry, 19(2), 376-379. https://doi.org/10.1039/C6GC02008A

pesci, L., Baydar, M., Glueck, S., Faber, K., Liese, A. & Kara, S. (2017). Development and scaling-up of the fragrance compound 4‑ethylguaiacol synthesis via a two-step chemo-enzymatic reaction sequence. Organic Process Research & Development, 21(1), 85-93. https://doi.org/10.1021/acs.oprd.6b00362

Assmann, M., Mügge, C., Gassmeyer, S. K., Enoki, J., Hilterhaus, L., Kourist, R., Liese, A. & Kara, S. (2017). Improvement of the Process Stability of Arylmalonate Decarboxylase by Immobilization for Biocatalytic Profen Synthesis. Frontiers in Microbiology, 8(MAR), Article 448. https://doi.org/10.3389/fmicb.2017.00448

Scherkus, C., Schmidt, S., T. Bornscheuer, U., Gröger, H., Kara, S. & Liese, A. (2017). Kinetic insights into ϵ‐caprolactone synthesis: improvement of an enzymatic cascade reaction. Biotechnology and Bioengineering, 114(6), 1215-1221. https://doi.org/10.1002/bit.26258

Assmann, M., Stöbener, A., Mügge, C., Gassmeyer, S. K., Hilterhaus, L., Kourist, R., Liese, A. & Kara, S. (2017). Reaction engineering of biocatalytic (S)-naproxen synthesis integrating in-line process monitoring by Raman spectroscopy. Reaction Chemistry & Engineering , 2(4), 531-540. https://doi.org/10.1039/C7RE00043J

Huang, L., Romero, E., K. Messmann, A., Rudroff, F., Hollmann, F., W. Fraaije, M. & Kara, S. (2017). Nicotinamide adenine dinucleotide-dependent redox-neutral convergent cascade for lactonizations with type II flavin-containing monooxygenase. Advanced Synthesis & Catalysis, 359(12), 2142-2148. https://doi.org/10.1002/adsc.201700401

Siphamandla Mthetwa, K., Kassier, K., Engel, J., Kara, S., Smit, M. & Opperman, D. J. (2017). Fungal BVMOs as alternatives to cyclohexanone monoxygenase. Enzyme and Microbial Technology, 106, 11-17. https://doi.org/10.1016/j.enzmictec.2017.06.017

Kara, S. & Schrittwieser, J. H. (2017). Enzymatische Reaktionskaskaden – „Fernbeziehungen“ und „Wohngemeinschaften“. BioSpektrum, 23(4), 468-470. https://doi.org/10.1007/s12268-017-0824-2

pesci, L., Gurikow, P., Liese, A. & Kara, S. (2017). Amine-mediated enzymatic carboxylation of phenols using CO2 as substrate. Biotechnology Journal. https://doi.org/10.1002/biot.201700332

Huang, L., Dominguez De Maria, P. & Kara, S. (2018). The ‘water challenge’: Opportunities and challenges of using oxidoreductases in non-conventional media. Chimica Oggi-Chemistry Today, 36(2), 48-56. http://www.teknoscienze.com/tks_article/the-water-challenge-opportunities-and-challenges-of-using-oxidoreductases-in-non-conventional-media/

Marietou, A., Chastain, R., Beulig, F., Scoma, A., Hazen, T. C. & Bartlett, D. H. (2018). Corrigendum: The Effect of Hydrostatic Pressure on Enrichments of Hydrocarbon Degrading Microbes From the Gulf of Mexico Following the Deepwater Horizon Oil Spill (vol 9, pg 808, 2018). Frontiers in Microbiology, 9, Article 1050. https://doi.org/10.3389/fmicb.2018.01050

Dos Reis Vechi, N., Agneessens, L., Ottosen, L. D. M., Feilberg, A. & Kofoed, M. V. W. (2018). In situ biogas upgrading: contribution of homoacetogenesis to methane production. Poster session presented at European Biomass Conference and Exhibition, Copenhagen, Denmark. http://programme.eubce.com/abstract.php?idabs=15852&idses=776&idtopic=12

Agneessens, L., Ottosen, L. D. M., Andersen, M., Berg Olesen, C. & Kofoed, M. V. W. (2018). The relevance of homoacetogenesis during biomethanation of surplus electricity in anaerobic digesters. In Slude Management in Circular Economy: Abstract book

Corona, A., Ambye-Jensen, M., Vega, G. C., Hauschild, M. Z. & Birkved, M. (2018). Techno-environmental assessment of the green biorefinery concept: Combining process simulation and life cycle assessment at an early design stage. Science of the Total Environment, 635, 100-111. https://doi.org/10.1016/j.scitotenv.2018.03.357

Li, J., Pedersen, J. N., Anankanbil, S. & Guo, Z. (2018). Enhanced fish oil-in-water emulsions enabled by rapeseed lecithins obtained under different processing conditions. Food Chemistry, 264, 233-240. https://doi.org/10.1016/j.foodchem.2018.05.053

Marietou, A., Chastain, R., Beulig, F., Scoma, A., Hazen, T. C. & Bartlett, D. H. (2018). The Effect of Hydrostatic Pressure on Enrichments of Hydrocarbon Degrading Microbes From the Gulf of Mexico Following the Deepwater Horizon Oil Spill. Frontiers in Microbiology, 9(APR), Article 808. https://doi.org/10.3389/fmicb.2018.00808

Jensen, M., Kofoed, M. V. W., Fischer, K., Voigt, N. V., Agneessens, L., Batstone, D. J. & Ottosen, L. D. M. (2018). Venturi-type injection system as a potential H2 mass transfer technology for full-scale in situ biomethanation. Applied Energy, 222, 840-846. https://doi.org/10.1016/j.apenergy.2018.04.034

Yong-Jin, H., Li, J., Guo, Z. & Chen, B. (2018). Synthesis of novel medium-long-medium type structured lipids from microalgae oil via two-step enzymatic reactions. Process Biochemistry, 68, 108-116. https://doi.org/10.1016/j.procbio.2018.02.005

Viana, F., Paz, L.-C., Methling, K., Damgaard, C. F., Lalk, M., Schramm, A. & Lund, M. B. (2018). Distinct effects of the nephridial symbionts Verminephrobacter and Candidatus Nephrothrix on reproduction and maturation of its earthworm host Eisenia andrei. F E M S Microbiology Ecology, 94(2), Article 178. https://doi.org/10.1093/femsec/fix178

Anankanbil, S., Pérez, B., Banerjee, C. & Guo, Z. (2018). New phenophospholipids equipped with multi-functionalities: Regiospecific synthesis and characterization. Journal of Colloid and Interface Science, 523, 169-178. https://doi.org/10.1016/j.jcis.2018.03.097

Chen, X., Li, J., Deng, L., Pedersen, J. N., Li, L., Guo, Z., Cong, F. & Xu, X. (2018). Biodiesel Production Using Lipases. In U. T. Bornscheuer (Ed.), Lipid Modification by Enzymes and Engineered Microbes (pp. 203-238). Academic Press. https://doi.org/10.1016/B978-0-12-813167-1.00010-4

Ottosen, L. D. M., Feilberg, A., Kofoed, M. V. W. & Guldberg, L. B. (2019). Stimulering af biologisk omsætning. (Patent No. DK2017PA70868).

Marietou, A., Roy, H., Jorgensen, B. B. & Kjeldsen, K. U. (2018). Sulfate Transporters in Dissimilatory Sulfate Reducing Microorganisms: A Comparative Genomics Analysis. Frontiers in Microbiology, 9(MAR), Article 309. https://doi.org/10.3389/fmicb.2018.00309

Agneessens, L., Ottosen, L. D. M., Andersen, M. M., Berg, C., Feilberg, A. & Kofoed, M. V. W. (2018). Parameters affecting acetate concentrations during in-situ biological hydrogen methanation. Bioresource Technology, 258, 33-40. https://doi.org/10.1016/j.biortech.2018.02.102

Wei, W., Lu, X., Wang, Z., Pérez, B., Liu, J., Wu, C., Dong, MD., Feng, F., Mu, H. & Guo, Z. (2017). Single-component solid lipid nanocarriers prepared with ultra-long chain amphiphilic lipids. Journal of Colloid and Interface Science, 505, 392-401. https://doi.org/10.1016/j.jcis.2017.06.022

Zhang, C., Dong, X., Guo, Z. & Sun, Y. (2018). Remarkably enhanced activity and substrate affinity of lipase covalently bonded on zwitterionic polymer-grafted silica nanoparticles. Journal of Colloid and Interface Science, 519, 145-153. https://doi.org/10.1016/j.jcis.2018.02.039

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