Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Sadegh, N., Uniacke, J., Feilberg, A. & Kofoed, M. V. W. (2024). Assessment of transient hydrogen sulfide peak emissions caused by biogas plant operation. Journal of Cleaner Production, 468, Artikel 142920. https://doi.org/10.1016/j.jclepro.2024.142920

Andrade, T. A., dos Passos, N. H. M., Fetzer, D. E. L. & Ambye-Jensen, M. (2024). Impact of Biomass Harvest-to-Processing Time on Protein Extraction in a Green Biorefinery Demonstration Plant. Chemical Engineering Transactions, 109, 109-114. https://doi.org/10.3303/CET24109019

Mi, H. T. N., Kim, H., Lee, J. S., Eser, B. E. & Han, J. (2024). Flavonoids Biotransformation by Human Gut Bacterium Dorea sp. MRG-IFC3 Cell-Free Extract. Journal of Microbiology and Biotechnology, 34(6), 1270-1275. https://doi.org/10.4014/jmb.2403.03058

Larsen, C. K., Lindquist, P., Rosenkilde, M., Madsen, A. R., Haselmann, K., Glendorf, T., Olesen, K., Kodal, A. L. B. & Tørring, T. (2024). Using LanM Enzymes to Modify Glucagon-Like Peptides 1 and 2 in E. coli. ChemBioChem, 25(13), Artikel e202400201. https://doi.org/10.1002/cbic.202400201

Mathiasen, S. S., M. Kanta, J., Ploug Frydenberg, R., Lundsgaard, A., Guo, Z., M. Fritzen, A., Kiens, B., Wiking, L. & Kleinert, M. (2024). Novel methodology to enrich medium- and short-chain fatty acids in milk fat to improve metabolic health. Food & Function, 15(15), 7951-7960. https://doi.org/10.1039/D4FO00267A, https://doi.org/10.1039/d4fo00267a

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Wegener Kofoed, M. V. (2024). Dose-dependent effects of sodium dodecyl sulfate and hydrogen peroxide treatments on methane emission from pig manure during storage. Journal of Environmental Management, 364, Artikel 121415. https://doi.org/10.1016/j.jenvman.2024.121415

Junker, A., Christensen, F. M. S., Bai, L., Jørgensen, M. K., Fojan, P., Khalil, A. & Wei, Z. (2024). Emerging investigator series: photocatalytic treatment of PFAS in a single-step ultrafiltration membrane reactor. Environmental Science: Water Research & Technology, 10(9), 2062-2074. https://doi.org/10.1039/d4ew00224e

Lara, A. R., Kunert, F., Vandenbroucke, V., Taymaz-Nikerel, H., Martínez, L. M., Sigala, J. C., Delvigne, F., Gosset, G. & Büchs, J. (2024). Transport-controlled growth decoupling for self-induced protein expression with a glycerol-repressible genetic circuit. Biotechnology and Bioengineering, 121(6), 1789-1802. https://doi.org/10.1002/bit.28697

Bravo-Olín, J., Martínez-Carreón, S. A., Francisco-Solano, E., Lara, A. R. & Beltran-Vargas, N. E. (2024). Analysis of the role of perfusion, mechanical, and electrical stimulation in bioreactors for cardiac tissue engineering. Bioprocess and Biosystems Engineering, 47(6), 767-839. https://doi.org/10.1007/s00449-024-03004-5

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Kiens, B., Guo, Z. & Wiking, L. (2024). Novel milk fat fractions for health and functionality obtained by short-path distillation. LWT, 201, Artikel 116255. https://doi.org/10.1016/j.lwt.2024.116255

Palacios, P. A., Philips, J., Bentien, A. & Kofoed, M. V. W. (2024). Relevance of extracellular electron uptake mechanisms for electromethanogenesis applications. Biotechnology Advances, 73, 108369. Artikel 108369. https://doi.org/10.1016/j.biotechadv.2024.108369

Wang, F., Ouyang, Y., Zhou, P., Zhang, Y., Gao, R., Eser, B. E. & Guo, Z. (2024). NIR-accelerated cascade reaction for degradation of organophosphorus compounds by Au/PTE/ZIF-8: Cooperative effect and mechanism. Catalysis Science & Technology, 14(12), 3424-3435. https://doi.org/10.1039/D4CY00311J

Li, L., Liu, G. & Guo, Z. (2024). Oleogels Produced by Direct Methods Using as Gelator: Fatty Acids (Including 12-HSA), Fatty Alcohols, Ceramides, Lecithins, Sterols, Cellulose Fibers, and Fumed Silica. I C. Palla & F. Valoppi (red.), Advances in Oleogel Development, Characterization, and Nutritional Aspects (s. 177–207). Springer. https://doi.org/10.1007/978-3-031-46831-5_8

Lara, A. R., Utrilla, J., Martínez, L. M., Krausch, N., Kaspersetz, L., Hidalgo, D., Cruz-Bournazou, N., Neubauer, P., Sigala, J. C., Gosset, G. & Büchs, J. (2024). Recombinant protein expression in proteome-reduced cells under aerobic and oxygen-limited regimes. Biotechnology and Bioengineering, 121(4), 1216-1230. https://doi.org/10.1002/bit.28645

Zhang, G., Li, Z., Guo, Z. & Charalampopoulos, D. (2024). Comparative extraction of melon seed (Cucumis melo L.) oil by conventional and enzymatic methods: physicochemical properties and oxidative stability. Journal of Agriculture and Food Research, 16, Artikel 101182. https://doi.org/10.1016/j.jafr.2024.101182

Kleikamp, H. B. C., Palacios, P. A., Kofoed, M. V. W., Papacharalampos, G., Bentien, A. & Nielsen, J. L. (2024). The Selenoproteome as a Dynamic Response Mechanism to Oxidative Stress in Hydrogenotrophic Methanogenic Communities. Environmental Science & Technology, 58(15), 6637-6646. https://doi.org/10.1021/acs.est.3c07725

Kofoed, M. V. W. (2019). In situ Methnation: Effect of Hydrogen on Acetate Production and Consumption Rates. Abstract fra 16th IWA World Conference on Anaerobic Digestion, Delft, Holland.

Kofoed, M. V. W. (2021). Mass transfer-based selection of carrier material to enhance biogas upgrading in a methanogenic biotrickling filter. Abstract fra Progress in Biogas V.

Kofoed, M. V. W. & Mørck Ottosen, L. D. (2023). Mikroorganismer omdanner menneskeskab CO₂. Aktuel Naturvidenskab, 2023(4), 13-16. https://aktuelnaturvidenskab.dk/find-artikel/nyeste-numre/4-2023/mikroorganismer-omdanner-menneskeskabt-co2

Romio, C., Kofoed, M. V. W. & Møller, H. B. (2023). Exploring increased hydraulic retention time as a cost-efficient way of valorizing residual biogas potential. Bioresource Technology, 387, 129646. Artikel 129646. https://doi.org/10.1016/j.biortech.2023.129646

Schütterle, D. M., Hegner, R., Temovska, M., Ortiz-Ardila, A. E. & Angenent, L. T. (2024). Exclusive D-lactate-isomer production during a reactor-microbiome conversion of lactose-rich waste by controlling pH and temperature. Water Research, 250, Artikel 121045. https://doi.org/10.1016/j.watres.2023.121045

dos Passos, N. H. M. & Ambye-Jensen, M. (2024). Fractionation of proteins from alfalfa juice at demonstration scale: Effects of temperature and centrifugation strategies on removal of green protein and recovery of the soluble white protein fraction. Separation and Purification Technology, 330(Part C), Artikel 125461. https://doi.org/10.1016/j.seppur.2023.125461

Oliveira, J. M. S., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Continuous biomethanation of flue gas-carbon dioxide using bio-integrated carbon capture and utilization. Bioresource Technology, 399, Artikel 130506. https://doi.org/10.1016/j.biortech.2024.130506

Borcher Møller, S. L., Rasmussen, M. H., Li, J., Svenningsen, E. B., Wørmer, G. J., Tørring, T. & Poulsen, T. B. (2024). The Biological Activities of Polyether Ionophore Antibiotic Routiennocin is Independent of Absolute Stereochemistry. ChemBioChem, 25(7), Artikel e202400013. https://doi.org/10.1002/cbic.202400013

Milić, M., Byström, E., Domínguez de María, P. & Kara, S. (2024). Selective Oxidation of 5-Hydroxymethylfurfural to 2,5-Diformylfuran in Biphasic Media using Immobilized Galactose Oxidase: Proof of Concept and Limitations. ChemCatChem, 16(4), Artikel e202301384. https://doi.org/10.1002/cctc.202301384

Petermeier, P. & Kara, S. (2021). Enzyme cascade reaction engineering. I Enzyme Cascade Design and Modelling (s. 109-124). Springer International Publishing. https://doi.org/10.1007/978-3-030-65718-5_7

Kara, S. & Rudroff, F. (2021). Preface. I Enzyme Cascade Design and Modelling (s. v-vi). Springer International Publishing.

Kara, S. & Rudroff, F. (2021). Perspectives. I Enzyme Cascade Design and Modelling (s. 179-181). Springer International Publishing. https://doi.org/10.1007/978-3-030-65718-5_11

Kara, S. & Rudroff, F. (2021). Introduction. I Enzyme Cascade Design and Modelling (s. 1-6). Springer International Publishing. https://doi.org/10.1007/978-3-030-65718-5_1

Petermeier, P., Bittner, J. P., Jonsson, T., Domínguez de María, P., Byström, E. & Kara, S. (2024). Integrated preservation of water activity as key to intensified chemoenzymatic synthesis of bio-based styrene derivatives. Communications Chemistry, 7(1), Artikel 57. https://doi.org/10.1038/s42004-024-01138-x

Tjell, A. Ø., Meyer, L.-E., Jud, B., Kara, S. & Mayr, T. (2024). At-line monitoring of hydrogen peroxide released from its photocatalytic and continuous synthesis. Reaction Chemistry & Engineering , 9(4), 777-781. https://doi.org/10.1039/d3re00659j

Huang, Z., Gu, Z., Abuduwupuer, X., Qin, D., Liu, Y., Guo, Z. & Gao, R. (2024). Engineering non-conservative substrate recognition sites of extradiol dioxygenase: Computation guided design to diversify and accelerate degradation of aromatic compounds. International Journal of Biological Macromolecules, 264(2), Artikel 130739. https://doi.org/10.1016/j.ijbiomac.2024.130739

Buljubašić, E., Bambace, M. F., Christensen, M. H. L., Ng, K.-S., Huertas-Díaz, L., Sundekilde, U., Marietou, A. & Schwab, C. (2024). Novel Lactobacillaceae strains and consortia to produce propionate-containing fermentates as biopreservatives. Microbial Biotechnology, 17(2), e14392. Artikel e14392. https://doi.org/10.1111/1751-7915.14392

Domínguez de María, P. & Kara, S. (2024). On the fate of deep eutectic solvents after their use as reaction media: the CO₂ production during downstream and ultimate disposal. RSC Sustainability, 2(3), 608-615. https://doi.org/10.1039/d4su00021h

Sandfeld, T., Grøn, L. V., Munoz Duarte, L. D., Meyer, R. L., Koren, K. & Philips, J. (2024). Considerations on the use of microsensors to profile dissolved H2 concentrations in microbial electrochemical reactors. P L o S One, 19(1), Artikel e0293734. https://doi.org/10.1371/journal.pone.0293734

Zhang, N., Domínguez de María, P. & Kara, S. (2024). Biocatalysis for the Synthesis of Active Pharmaceutical Ingredients in Deep Eutectic Solvents: State-of-the-Art and Prospects. Catalysts, 14(1), Artikel 84. https://doi.org/10.3390/catal14010084

Sieborg, M. U., Santos Oliveira, J. M., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Flue-to-fuel: Bio-integrated carbon capture and utilization of dilute carbon dioxide gas streams to renewable methane. Energy Conversion and Management, 302, Artikel 118090. https://doi.org/10.1016/j.enconman.2024.118090

Zhou, P., Zhang, Y., Liu, W., Jones, N. C., Hoffmann, S. V., Eser, B. E., Zhang, M., Ouyang, Y., Wang, F., Deng, Y., Zhang, M. & Guo, Z. (2024). Effect of Deep Eutectic Mixtures in Hydroxylation of Fatty Acids: A Correlation between Water Activity and Thermostability of FA-HY1. ACS Sustainable Chemistry & Engineering, 12(5), 1918-1929. https://doi.org/10.1021/acssuschemeng.3c05867

Lopez-Rodulfo, I. M., Tsochatzis, E. D., Stentoft, E. W., Martinez-Carrasco, P., Bechtner, J. D. & Martinez, M. M. (2024). Partitioning and in vitro bioaccessibility of apple polyphenols during mechanical and physiological extraction: A hierarchical clustering analysis with LC-ESI-QTOF-MS/MS. Food Chemistry, 441, Artikel 138320. https://doi.org/10.1016/j.foodchem.2023.138320

Bogojevic, O., Johnsen, N. K., Arevång, C. & Guo, Z. (2023). Ionic Liquid-Mediated Biocatalytic Synthesis of α-Lipoic Acid-Containing Phospholipids: Reaction System Engineering beyond Green Chemistry. ACS Sustainable Chemistry and Engineering, 11(51), 17920-17929. https://doi.org/10.1021/acssuschemeng.3c04234

Stødkilde, L., Ingerslev, A. K., Ambye-Jensen, M. & Jensen, S. K. (2024). The composition and nutritional quality of biorefined lucerne protein depend on precipitation method. Journal of the Science of Food and Agriculture, 104(6), 3405-3412. https://doi.org/10.1002/jsfa.13226

Billing, A. M., Kim, Y. C., Gullaksen, S., Schrage, B., Raabe, J., Hutzfeldt, A., Demir, F., Kovalenko, E., Lassé, M., Dugourd, A., Fallegger, R., Klampe, B., Jaegers, J., Li, Q., Kravtsova, O., Crespo-Masip, M., Palermo, A., Fenton, R. A., Hoxha, E. ... Rinschen, M. M. (2024). Metabolic Communication by SGLT2 Inhibition. Circulation, 149(11), 860-884. https://doi.org/10.1161/CIRCULATIONAHA.123.065517

Bogojevic, O., Zhang, Y., Wolff, C. D., Johnsen, N. K., Arevång, C. & Guo, Z. (2024). A Chemo-Enzymatic Cascade Strategy for the Synthesis of Phosphatidylcholine Incorporated with Structurally Diverse FAHFAs. The Journal of Organic Chemistry, 89(2), 1035-1044. https://doi.org/10.1021/acs.joc.3c02131

Philips, J., Procopio, L. & Marshall, I. P. G. (2023). Insights into the various mechanisms by which Shewanella spp. induce and inhibit steel corrosion. npj Materials Degradation, 7(1), Artikel 95. https://doi.org/10.1038/s41529-023-00416-8

Khazaee, Z., Ouyang, Y., Zhang, Y., Bogojevic, O., Plesner, T. J. & Guo, Z. (2024). Stacked Covalent Organic Ribbons Perpendicular to Graphene Oxide Sheets: a 1D-p-2D Design for Photocatalytic Tandem Reactions. Chemistry - A European Journal, 30(12), Artikel e202303615. https://doi.org/10.1002/chem.202303615

Ingribelli, E., Modrackova, N., Tejnecky, V., Killer, J., Schwab, C. & Neuzil-Bunesova, V. (2023). Culture-dependent screening of endospore-forming clostridia in infant feces. BMC Microbiology, 23, Artikel 347. https://doi.org/10.1186/s12866-023-03104-4

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Effects of surfactant, oxidant, and flocculant treatments on methane emission from pig slurry during storage. Journal of Cleaner Production, 430, Artikel 139665. https://doi.org/10.1016/j.jclepro.2023.139665

Gkantzou, E., Weinhart, M. & Kara, S. (2023). 3D printing for flow biocatalysis. RSC Sustainability, 1(7), 1672-1685. https://doi.org/10.1039/d3su00155e

Palacios, P. A., Kleikamp, H., Nielsen, J. L., Jensen, M. B., Bentien, A. & Kofoed, M. V. W. (2023). Quinone-mediated extracellular electron transfer processes in ex situ biomethanation reactors. Bioresource Technology Reports, 24, Artikel 101671. https://doi.org/10.1016/j.biteb.2023.101671

Busk, M., Eggertsen, P. P., Overgaard, J., Horsman, M. R., Tørring, T., Jacobsen, K. M. & Poulsen, T. B. (2023). In Vitro Characterization of the Bacteria-derived Hypoxia-selective Cytotoxin BE-₄₃₅₄₇. Anticancer Research, 43(12), 5319-5329. https://doi.org/10.21873/anticanres.16735

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Revideret 16.01.2025

AU Engineering