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Institut for Bio- og Kemiteknologi

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Kuipers, S. B. & Kofoed, M. V. W. (2023). Biomethanation of syngas in packed bed reactors: A study of adaptation and microbial pathways in a thermophilic mixed consortium. Bioresource Technology Reports, 24, Artikel 101667. https://doi.org/10.1016/j.biteb.2023.101667

Dai, R., Dai, C., Hou, S., He, Q., Liu, B., Huang, M., Jiang, H., Li, M. H., Pan, L., Guo, Z., Kim, J., Han, M., Yamauchi, Y. & Xu, X. (2023). Opportunities and challenges of hydrotalcite-related electrocatalysts for seawater splitting: a systematic perspective from materials synthesis, characterization and application. Journal of Materials Chemistry A, 11(38), 20383-20407. https://doi.org/10.1039/d3ta02524a

Cheng, W., Yu, B., Zheng, Y., Yang, P., Ke, Z., Zhou, X., Guo, Z., Xu, X., Ding, Y. & Liu, S. (2024). Chemical enrichment of conjugated linoleic acid in cottonseed oil using ruthenium nanoparticle immobilized on chemically modified multiwalled carbon nanotube as heterogeneous nanocatalyst. Journal of the American Oil Chemists' Society, 101(11), 1133-1143. https://doi.org/10.1002/aocs.12785

Zhou, P., Liu, W., Zhang, Y., Liu, G., Zhao, Z., Zhang, M., Wei , Z., Zhang, Y., Tang, X., Li, P., Deng, Y., Zhang, M. & Guo, Z. (2023). Tuning multi-purpose glycerol-based deep eutectic solvents for biocatalytic deacidification of high-acid rice bran oil: Kinetics, mechanism, and inhibition of side glycerolysis. LWT - Food Science and Technology, 189, Artikel 115535. https://doi.org/10.1016/j.lwt.2023.115535

Engelbrecht, N., Sieborg, M. U., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Metabolic heat production impacts industrial upscaling of ex situ biomethanation trickle-bed reactors. Energy Conversion and Management, 299, Artikel 117769. https://doi.org/10.1016/j.enconman.2023.117769

Xiong, X., Wu, F., Ouyang, Y., Liu, Y., Wang, Z., Tian, H. & Dong, M. (2024). Oxygen Incorporated MoS₂ for Rectification-Mediated Resistive Switching and Artificial Neural Network. Advanced Functional Materials, 34(15), Artikel 2213348. https://doi.org/10.1002/adfm.202213348

Marietou, A., Schmidt, J. S., Rasmussen, M. R., Scoma, A., Rysgaard, S. & Vergeynst, L. (2023). The effect of hydrostatic pressure on the activity and community composition of hydrocarbon-degrading bacteria in Arctic seawater. Applied and Environmental Microbiology, 89(11), Artikel e0098723. https://doi.org/10.1128/aem.00987-23

Zoppi, G., Andrade, T. A., Ward, A. J., Ambye-Jensen, M. & Biller, P. (2023). Biorefinery integration of a green protein platform for maximum resource utilization. Cleaner and Circular Bioeconomy, 6, Artikel 100064. https://doi.org/10.1016/j.clcb.2023.100064

Sieborg, M. U., Engelbrecht, N., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Sunshine-to-fuel: Demonstration of coupled photovoltaic-driven biomethanation operation, process, and techno-economical evaluation. Energy Conversion and Management, 299, Artikel 117767. https://doi.org/10.1016/j.enconman.2023.117767

Schweigerdt, A., D. Stöbener, D., Schäfer, A., Kara, S. & Weinhart, M. (2023). Impact of Amphiphilicity Balance in Hydroxy-Functional, Isomeric, Thermoresponsive Poly(meth)acrylates. Macromolecules, 8602-8613. https://doi.org/10.1021/acs.macromol.3c01251

Allan Andrade, T., Ramírez-Márquez, C. & Ambye-Jensen, M. (2023). Process simulation of an integrated green protein biorefinery using nanofiltration membrane and ethanol fermentation. Separation and Purification Technology, 327, Artikel 124887. https://doi.org/10.1016/j.seppur.2023.124887

Chan, S. W. S., Marami, H., Tayo, L. L., Fog, E., Andrade, T. A., Ambye-Jensen, M., Birkved, M. & Khoshnevisan, B. (2024). Environmental impacts of a novel biorefinery platform integrated with power-to-protein technology to decrease dependencies on soybean imports. Science of the Total Environment, 907, Artikel 167943. https://doi.org/10.1016/j.scitotenv.2023.167943

Choi, J., Kim, Y., Eser, B. E. & Han, J. (2023). Theoretical study on the glycosidic C-C bond cleavage of 3''-oxo-puerarin. Scientific Reports, 13(1), Artikel 16282. https://doi.org/10.1038/s41598-023-43379-1

Shen, W., A. Dalby, P., Guo, Z., Li, W., Zhu, C. & Fan, D. (2023). Residue Effect-Guided Design: Engineering of S. Solfataricus β-Glycosidase to Enhance Its Thermostability and Bioproduction of Ginsenoside Compound K. Journal of Agricultural and Food Chemistry, 71(44), 16669–16680. https://doi.org/10.1021/acs.jafc.3c04575

Ramirez Garcia, A., Greppi, A., Constancias, F., Ruscheweyh, H.-J., Gasser, J., Hurley, K., Sturla, S. J., Schwab, C. & Lacroix, C. (2023). Anaerobutyricum hallii promotes the functional depletion of a food carcinogen in diverse healthy fecal microbiota. Frontiers in Microbiomes, 2, Artikel 1194516. https://doi.org/10.3389/frmbi.2023.1194516

Høgsgaard, K., Vidal, N. P., Marietou, A., Fiehn, O. G., Li, Q., Bechtner, J., Catalano, J., Martinez, M. M. & Schwab, C. (2023). Fucose modifies short chain fatty acid and H2S formation through alterations of microbial cross-feeding activities. FEMS Microbiology Ecology, 99(10), Artikel fiad107. https://doi.org/10.1093/femsec/fiad107

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Kiens, B., Guo, Z. & Wiking, L. (2023). Novel milk fat fractions for health and functionality obtained by short path distillation.

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Mitigation of methane emission from pig slurry storage with sodium dodecyl sulfate and hydrogen peroxide treatments. 222. Poster-session præsenteret på RAMIRAN, Cambridge, Storbritannien.

Yesiltas, B., Garcia-Moreno, P. J., Sørensen, A.-D. M., Banerjee, C., Anankanbil, S., Guo, Z., Ogilby, P. R. & Jacobsen, C. (2023). The Use of Soy and Egg Phosphatidylcholines Modified with Caffeic Acid Enhances the Oxidative Stability of High-Fat (70%) Fish Oil-in-Water Emulsions. Colloids and Interfaces , 7(3), Artikel 60. https://doi.org/10.3390/colloids7030060

Dalby, F. R., Ambrose, H. W., Poulsen, J. S., Nielsen, J. J. L. & Adamsen, A. P. S. (2023). Pig slurry organic matter transformation and methanogenesis at ambient storage temperatures. Journal of Environmental Quality, 52(6), 1139-1151. https://doi.org/10.1002/jeq2.20512

Domínguez de María, P., Kara, S. & Gallou, F. (2023). Biocatalysis in Water or in Non-Conventional Media? Adding the CO2 Production for the Debate. Molecules, 28(18), Artikel 6452. https://doi.org/10.3390/molecules28186452

Huertas-Díaz, L., Kyhnau, R., Ingribelli, E., Neuzil-Bunesova, V., Li, Q., Sasaki, M., Lauener, R. P., Roduit, C., Frei, R., CK-CARE study group, Sundekilde, U. & Schwab, C. (2023). Breastfeeding and the major fermentation metabolite lactate determine occurrence of Peptostreptococcaceae in infant feces. Gut Microbes, 15(1), Artikel 2241209. https://doi.org/10.1080/19490976.2023.2241209

Pourjafar, M., Saidijam, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2023). Surfaceome Profiling Suggests Potential of Anti-MUC1×EGFR Bispecific Antibody for Breast Cancer Targeted Therapy. Journal of Immunotherapy, 46(7), 245-261. https://doi.org/10.1097/CJI.0000000000000482

Gylling, M., Nord-Larsen, T., Bruhn, A., Thomsen, M., Ambye-Jensen, M., Mortensen, E. Ø. & Jørgensen, U. (2023). Potential Danish biomass production and utilization in 2030. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA Report Nr. 219 https://dcapub.au.dk/djfpublikation/djfpdf/DCArapport219.pdf

Tesson, S. V. M., Barbato, M. & Rosati, B. (2023). Aerosolization flux, bio-products, and dispersal capacities in the freshwater microalga Limnomonas gaiensis (Chlorophyceae). Communications Biology, 6(1), Artikel 809. https://doi.org/10.1038/s42003-023-05183-5

Vaupel, S., Mau, R., Kara, S., Seitz, H., Kragl, U. & Meyer, J. (2023). 3D printed and stimulus responsive drug delivery systems based on synthetic polyelectrolyte hydrogels manufactured via digital light processing. Journal of Materials Chemistry B, 28(11), 6547-6559. https://doi.org/10.1039/D3TB00285C

De Santis, P., Wegstein, D., O. Burek, B., Patzsch, J., Alcalde, M., Kroutil, W., Z. Bloh, J. & Kara, S. (2023). Robust Light Driven Enzymatic Oxyfunctionalization Via Immobilization of Unspecific Peroxygenase. ChemSusChem, 16(23), Artikel e202300613. https://doi.org/10.1002/cssc.202300613

Röllig, R., Paul, C. E., Rousselot-Pailley, P., Kara, S. & Alphand, V. (2023). Hybrid catalysis for enantioselective Baeyer-Villiger oxidation and stereoselective epoxidation: A Cp*Ir complex to fuel FMN and FAD reduction for flavoprotein monooxygenase modules. Reaction Chemistry & Engineering , 8(12), 3117-3123. https://doi.org/10.1039/d3re00411b

Jopp, S., Fleischhammer, T., Lavrentieva, A., Kara, S. & Meyer, J. (2023). Synthesis, biocompatibility, and antimicrobial properties of glucose-based ionic liquids. RSC Sustainability, 1(7), 1751-1764. https://doi.org/10.1039/d3su00191a

Arana Juve, J. M., Baami González, X., Bai, L., Xie, Z., Shang, Y., Saad, A., Gonzalez-Olmos, R., Wong, M. S., Ateia, M. & Wei, Z. (2024). Size-selective trapping and photocatalytic degradation of PFOA in Fe-modified zeolite frameworks. Applied Catalysis B: Environmental, 349, Artikel 123885. https://doi.org/10.1016/j.apcatb.2024.123885

Zong, L., Zhang, Y., Shao, Z., Ljubic, A., Jacobsen, C., Gao, R., Eser, B. E., Wang, Y., Wang, Y. & Guo, Z. (2023). Selective and Sustainable Production of Sub-terminal Hydroxy Fatty Acids by a Self-Sufficient CYP102 Enzyme from Bacillus Amyloliquefaciens. ChemBioChem, 24(18), Artikel e202300368. https://doi.org/10.1002/cbic.202300368

Zhang, Y., Plesner, T. J., Ouyang, Y., Zheng, Y.-C., Bouhier, E., Ingemann Berentzen, E., Zhang, M., Zhou, P., Zimmermann , W., Andersen, G. R. & Guo, Z. (2023). Computer-aided discovery of a novel thermophilic laccase for low-density polyethylene degradation. Journal of Hazardous Materials, 458, Artikel 131986. https://doi.org/10.1016/j.jhazmat.2023.131986

Sieborg, M. U., Ottosen, L. D. M. & Kofoed, M. V. W. (2023). Enhanced process control of trickle-bed reactors for biomethanation by vertical profiling directed by hydrogen microsensor monitoring. Bioresource Technology, 384, Artikel 129242. https://doi.org/10.1016/j.biortech.2023.129242

Ye, S., Cheng, Y., Guo, Z., Wang, X. & Wei , W. (2023). A Lipid Toolbox of Sugar Alcohol Fatty Acid Monoesters for Single-component Lipid Nanoparticles with Temperature-controlled Release. Colloids and Surfaces B: Biointerfaces, 228, Artikel 113426. https://doi.org/10.1016/j.colsurfb.2023.113426

Wollesen, M., Mikkelsen, K., Tvilum, M. S., Vestergaard, M., Wang, M., Meyer, R. L., Ingmer, H., Poulsen, T. & Tørring, T. (2023). Polyether Ionophore Antibiotics Target Drug-Resistant Clinical Isolates, Persister Cells, and Biofilms. Microbiology Spectrum, 11(4), Artikel e0062523. https://doi.org/10.1128/spectrum.00625-23

Bogojevic, O., Zhang, Y., Wolff, C. D., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). A sustainable and regioselective synthesis of Hemi-bis(monoacylglycero)phosphates and bis(diacylglycero)phosphates. iScience, 26(7), Artikel 107075. https://doi.org/10.1016/j.isci.2023.107075

Ng, K. S., Bambace, M. F. & Schwab, C. (2023). Microbially-produced short chain carboxylic acids are ancient food biopreservatives with complex mode of action. Current Opinion in Food Science, 52, Artikel 101066. https://doi.org/10.1016/j.cofs.2023.101066

Ambye-Jensen, M., (2022). Arealanvendelse og bioøkonomi. Synergier og systemgevinster ved ændret arealanvendelse og bioraffinering, Nr. 2022-0340167 / 2020-0114173, 34 s., feb. 11, 2022. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Gaffey, J., Rajauria, G., McMahon, H., Ravindran, R., Dominguez, C., Ambye-Jensen, M., Souza, M. F., Meers, E., Aragonés, M. M., Skunca, D. & Sanders, J. P. M. (2023). Green Biorefinery systems for the production of climate-smart sustainable products from grasses, legumes and green crop residues. Biotechnology Advances, 66, Artikel 108168. https://doi.org/10.1016/j.biotechadv.2023.108168

Munoz Duarte, L. D. & Philips, J. (2023). No acetogen is equal: Strongly different H₂ thresholds reflect diverse bioenergetics in acetogenic bacteria. Environmental Microbiology, 25(10), 2032-2040. https://doi.org/10.1111/1462-2920.16429

Jørgensen, U., Jensen, S. K. & Ambye-Jensen, M. (2023). Coupler les avantages des cultures herbagères et du bioraffinage vert pour produire des protéines, des matériaux et des services pour la transition écologique. Fourrages , 253, 47-60.

Feilberg, A., Ambrose, H. W., Dalby, F. R. & Kofoed, M. V. W. (2023). Residual slurry treatment combined with weekly discharge: Elimination of in-house methane emission in livestock facilities. Abstract fra Agri Food and Climate Circle 2023, København, Danmark.

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Additives and methods for the mitigation of methane emission from stored liquid manure. Biosystems Engineering, 229, 209-245. https://doi.org/10.1016/j.biosystemseng.2023.03.015

Klein, V. J., Brito, L. F., Perez-Garcia, F., Brautaset, T. & Irla, M. (2023). Metabolic engineering of thermophilic Bacillus methanolicus for riboflavin overproduction from methanol. Microbial Biotechnology, 16(5), 1011-1026. https://doi.org/10.1111/1751-7915.14239

Alphand, V., van Berkel, W. J. H., Jurkas, V., Kara, S., Kourist, R., Kroutil, W., Mascia, F., M. Nowaczyk, M., Paul, C. E., Schmidt, S., Spasic, J., Tamagnini, P. & Winkler, C. K. (2023). Exciting Enzymes: Current State and Future Perspective of Photobiocatalysis. ChemPhotoChem, 7(7), Artikel e202200325. https://doi.org/10.1002/cptc.202200325

Gao, P., Zhang, X., Huang, X., Chen, Z., Marietou, A., Holmkvist, L., Qu, L., Finster, K. & Gong, X. (2023). Genomic insight of sulfate reducing bacterial genus Desulfofaba reveals their metabolic versatility in biogeochemical cycling. BMC Genomics, 24(1), Artikel 209. https://doi.org/10.1186/s12864-023-09297-2

Semproli, R., Chanquia, S. N., Bittner, J. P., Müller, S., Domínguez de María, P., Kara, S. & Ubiali, D. (2023). Deep Eutectic Solvents for the Enzymatic Synthesis of Sugar Esters: A Generalizable Strategy? ACS Sustainable Chemistry & Engineering, 11(15), 5926-5936. https://doi.org/10.1021/acssuschemeng.2c07607

Meyer, L.-E., Horvath, D., Vaupel, S., Meyer, J., Alcalde, M. & Kara, S. (2023). A 3D printable synthetic hydrogel as an immobilization matrix for continuous synthesis with fungal peroxygenases. Reaction Chemistry & Engineering , 8(5), 984-988. https://doi.org/10.1039/d3re00058c

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., Hacker, S. M., Palmfeldt, J. & Poulsen, T. B. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. RSC Chemical Biology, 3(10), 1216-1229. https://doi.org/10.1039/d2cb00161f

Li, Z., Zhang, G., Charalampopoulos, D. & Guo, Z. (2023). Ionic liquid-mediated regeneration of cellulose dramatically improves decrystallization, TEMPO-mediated oxidation and alkyl/alkenyl succinylation. International Journal of Biological Macromolecules, 236, Artikel 123983. https://doi.org/10.1016/j.ijbiomac.2023.123983

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