Institut for Bio- og Kemiteknologi

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Publications by Bioprocess Engineering

Are you looking for publications by Section of Bioprocess Engineering? On this page you can find all the publications made by the Section of Bioprocess Engineering - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Hobisch, M., De Santis, P., Serban, S., Basso, A., Byström, E. & Kara, S. (2022). Peroxygenase-Driven Ethylbenzene Hydroxylation in a Rotating Bed Reactor. Organic Process Research & Development, 26(9), 2761-2765. https://doi.org/10.1021/acs.oprd.2c00211
De Santis, P., Petrovai, N., Meyer, L.-E., Hobisch, M. & Kara, S. (2022). A holistic carrier-bound immobilization approach for unspecific peroxygenase. Frontiers in Chemistry, 10, Artikel 985997. https://doi.org/10.3389/fchem.2022.985997
Petermeier, P., Bittner, J. P., Müller, S., Byström, E. & Kara, S. (2022). Design of a green chemoenzymatic cascade for scalable synthesis of bio-based styrene alternatives. Green Chemistry, 24(18), 6889-6899. https://doi.org/10.1039/d2gc01629j
Pourjafar, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2022). Construction, expression and functional characterization of an engineered antibody against tumor antigen MUC-1C. Protein Expression and Purification, 199, Artikel 106148. https://doi.org/10.1016/j.pep.2022.106148
Zhou, Y., Pedersen, J. N., Pedersen, J. N., Jones, N. C., Hoffmann, S. V., Petersen, S. V., Pedersen, J. S., Perriman, A., Gao, R. & Guo, Z. (2022). Superanionic Solvent-Free Liquid Enzymes Exhibit Enhanced Structures and Activities. Advanced Science, 9(32), Artikel 2202359. https://doi.org/10.1002/advs.202202359
Barbato, M., Vacchini, V., Engelen, A. H., Patania, G., Mapelli, F., Borin, S. & Crotti, E. (2022). What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria. AMB Express, 12(1), Artikel 98. https://doi.org/10.1186/s13568-022-01440-8
Renaudeau, D., Jensen, S. K., Ambye-Jensen, M., Adler, S., Bani, P., Juncker, E. & Stødkilde, L. (2022). Nutritional values of forage-legume-based silages and protein concentrates for growing pigs. Animal : an international journal of animal bioscience, 16(7), Artikel 100572. https://doi.org/10.1016/j.animal.2022.100572
Andersen, F. D., Pedersen, K. D., Wilkens Juhl, D., Mygind, T., Chopin, P., B. Svenningsen, E., Poulsen, T. B., Braad Lund, M., Schramm, A., Gotfredsen, C. H. & Tørring, T. (2022). Triculamin: An Unusual Lasso Peptide with Potent Antimycobacterial Activity. Journal of Natural Products, 85(6), 1514-1521. https://doi.org/10.1021/acs.jnatprod.2c00065
Bogojevic, O., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2022). Designer phospholipids – structural retrieval, chemo-/bio- synthesis and isotopic labeling. Biotechnology Advances, 60, Artikel 108025. https://doi.org/10.1016/j.biotechadv.2022.108025
Li, Z., Anankanbil, S., Li, L., Lyu, J., Nadzieja, M. & Guo, Z. (2023). Alkylsuccinylated oxidized cellulose-based amphiphiles as a novel multi-purpose ingredient for stabilizing O/W emulsions. Food Hydrocolloids, 134, Artikel 108014. https://doi.org/10.1016/j.foodhyd.2022.108014
Ma, Y., Zhang, N., Vernet, G. & Kara, S. (2022). Design of Fusion Enzymes for Biocatalytic Applications in Aqueous and Non-aqueous Media. Frontiers in Bioengineering and Biotechnology, 10, Artikel 944226. https://doi.org/10.3389/fbioe.2022.944226
Yang, T., Zhang, Y., Xu, L., Zhu, H., Zhang, J., Guo, Z., Huang, F. & Zheng, M. (2022). pH-Switchable Pickering Interfacial Biocatalysis: One-Pot Enzymatic Synthesis of Phytosterol Esters with Low-Value Rice Bran Oi. ACS Sustainable Chemistry & Engineering, 10(21), 6963–6972. https://doi.org/10.1021/acssuschemeng.1c08719
de Jonge, N., Poulsen, J. S., Vechi, N. T., Kofoed, M. V. W. & Nielsen, J. L. (2022). Wood-Ljungdahl pathway utilisation during in situ H2 biomethanation. Science of the Total Environment, 806(Part 3), Artikel 151254. https://doi.org/10.1016/j.scitotenv.2021.151254
Romio, C., Vedel Wegener Kofoed, M. & Bjarne Møller, H. (2022). Effect of ultrasonic and electrokinetic post-treatments on methane yield and viscosity of agricultural digestate. Bioresource Technology, 358, Artikel 127388. https://doi.org/10.1016/j.biortech.2022.127388
Röllig, R., Paul, C. E., Duquesne, K., Kara, S. & Alphand, V. (2022). Exploring the temperature effect on enantioselectivity of a Baeyer-Villiger biooxidation by the 2,5-DKCMO module: The SLM approach. ChemBioChem, 23(15), Artikel e202200293. https://doi.org/10.1002/cbic.202200293
Neuzil-Bunesova, V., Ramirez Garcia, A., Modrackova, N., Makovska, M., Sabolova, M., Spröer, C., Bunk, B., Blom, J. & Schwab, C. (2022). Feed Insects as a Reservoir of Granadaene-Producing Lactococci. Frontiers in Microbiology, 13, Artikel 848490. https://doi.org/10.3389/fmicb.2022.848490
Zhang, Y., Pedersen, J. N., Eser, B. E. & Guo, Z. (2022). Biodegradation of polyethylene and polystyrene: From microbial deterioration to enzyme discovery. Biotechnology Advances, 60, Artikel 107991. https://doi.org/10.1016/j.biotechadv.2022.107991
Dai, R. & Guo, Z. (2022). Pd/Ni-Al hydrotalcite for base-free alcohol oxidation: Dependency of activity and selectivity on palladium precursors and reduction reagents. Molecular Catalysis , 526, Artikel 112403. https://doi.org/10.1016/j.mcat.2022.112403
Stødkilde-Jørgensen, L., Lærke, H. N., Ambye-Jensen, M. & Jensen, S. K. (2022). Protein concentrates from lucerne; effect of processing on ileal digestibility. Animal - Science proceedings, 13(2), 145. Artikel O1. https://doi.org/10.1016/j.anscip.2022.04.002
Barbato, M., Palma, E., Marzocchi, U., Cruz Viggi, C., Rossetti, S., Aulenta, F. & Scoma, A. (2022). Snorkels enhance alkanes respiration at ambient and increased hydrostatic pressure (10 MPa) by either supporting the TCA cycle or limiting alternative routes for acetyl-CoA metabolism. Journal of Environmental Management, 316, Artikel 115244. https://doi.org/10.1016/j.jenvman.2022.115244
T. Grosmann, M., Andrade, T. A., di Bitonto, L., Pastore, C., Corazza, M. L., Tronci, S. & Errico, M. (2022). Hydrated metal salt pretreatment and alkali catalyzed reactive distillation: A two-step production of waste cooking oil biodiesel. Chemical Engineering and Processing - Process Intensification, 176, Artikel 108980. https://doi.org/10.1016/j.cep.2022.108980
Meyer, L.-E., Andersen, M. B. & Kara, S. (2022). A Deep Eutectic Solvent Thermomorphic Multiphasic System for Biocatalytic Applications. Angewandte Chemie International Edition, 61(31), Artikel e202203823. https://doi.org/10.1002/anie.202203823
Yazdi, F. G., Dalgaard, L. B., Li, Q., Ruscheweyh, H.-J., Thøgersen, R., Bertram, H. C. S., Hansen, M. & Schwab, C. (2022). Long-term daily high-protein, drained yoghurt consumption alters abundance of selected functional groups of the human gut microbiota and fecal short-chain fatty acid profiles in a cohort of overweight and obese women. Journal of Functional Foods, 93, Artikel 105089. https://doi.org/10.1016/j.jff.2022.105089
Dalby, F. R., Guldberg, L. B., Feilberg, A. & Kofoed, M. V. W. (2022). Reducing greenhouse gas emissions from pig slurry by acidification with organic and inorganic acids. PLoS One, 17(5), Artikel e0267693. https://doi.org/10.1371/journal.pone.0267693
Ambye-Jensen, M., (2022). Støtte til kvalificering af bioraffineringsprojekter – Del 1, Nr. 2022-0356347, 4 s., maj 12, 2022.
Irla, M. & Wendisch, V. F. (2022). Efficient cell factories for the production of N-methylated amino acids and for methanol-based amino acid production. Microbial Biotechnology, 15(8), 2145-2159. https://doi.org/10.1111/1751-7915.14067
Lyu, J., Zhang, J., Zhu, J., Chen, S., Han, T., Zhang, Y., Gao, R., Xie, G. & Guo, Z. (2022). Molecular dynamics simulation guided distal mutation of Thermotoga naphthophila β-glucosidase for significantly enhanced synthesis of galactooligosaccharides and expanded product scope. International Journal of Biological Macromolecules, 210, 21-32. https://doi.org/10.1016/j.ijbiomac.2022.05.002
Huang, Z., Guo, S., Guo, Z., He, Y. & Chen, B. (2022). Integrated green one-step strategy for concurrent recovery of phycobiliproteins and polyunsaturated fatty acids from wet Porphyridium biomass. Food Chemistry, 389, Artikel 133103. https://doi.org/10.1016/j.foodchem.2022.133103
Milic, M., Byström, E., Domínguez de María, P. & Kara, S. (2022). Enzymatic Cascade for the Synthesis of 2,5-Furandicarboxylic Acid in Biphasic and Microaqueous Conditions: ‘Media-Agnostic’ Biocatalysts for Biorefineries. ChemSusChem, 15(9), Artikel e202102704. https://doi.org/10.1002/cssc.202102704
Mapelli, F., Barbato, M., Chouaia, B., Riva, V., Daffonchio, D. & Borin, S. (2022). Bacterial community structure and diversity along the halocline of Tyro deep-sea hypersaline anoxic basin. Annals of Microbiology, 72(1), Artikel 7. https://doi.org/10.1186/s13213-022-01667-7
Liu, G., Bogojevic, O., Pedersen, J. N. & Guo, Z. (2022). Edible oleogels as solid fat alternatives: Composition and oleogelation mechanism implications. Comprehensive Reviews in Food Science and Food Safety, 21(3), 2077-2104. https://doi.org/10.1111/1541-4337.12928
Xie, D., Ji, X., Dai, Y., He, Y., Sun, H., Guo, Z., Yang, Y., Zheng, X. & Chen, B. (2022). Chlorella vulgaris cultivation in pilot-scale to treat real swine wastewater and mitigate carbon dioxide for sustainable biodiesel production by direct enzymatic transesterification. Bioresource Technology, 349, Artikel 126886. https://doi.org/10.1016/j.biortech.2022.126886
Aagaard, J. B., Sivelle, C., Fischer, M., Byskov, K., Laursen, N. S., Pfützner, W., Jakob, T., Möbs, C., Miehe, M. & Spillner, E. (2022). Nanobody-based human antibody formats act as IgE surrogate in hymenoptera venom allergy. Allergy: European Journal of Allergy and Clinical Immunology, 77(9), 2859-2862. https://doi.org/10.1111/all.15391
Andrade, T. A. & Ambye-Jensen, M. (2022). Process Integration and Techno-Economic Assessment of a Green Biorefinery Demonstration Scale Platform for Leaf Protein Production. I L. Montastruc & S. Negny (red.), Computer Aided Chemical Engineering: 32nd European Symposium on Computer Aided Process Engineering (Bind 51, s. 877-882). Artikel 147 Elsevier. https://doi.org/10.1016/B978-0-323-95879-0.50147-8, https://doi.org/10.1016/B978-0-323-95879-0.50147-8
Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T. M. B., Wendisch, V. F. & Brautaset, T. (2017). L-lysine production by Bacillus methanolicus: Genome-based mutational analysis and L-lysine secretion engineering. Journal of Biotechnology, 244, 25-33. https://doi.org/10.1016/j.jbiotec.2017.02.001
Klein, V. J., Irla, M., López, M. G., Brautaset, T. & Brito, L. F. (2022). Unravelling Formaldehyde Metabolism in Bacteria: Road towards Synthetic Methylotrophy. Microorganisms, 10(2), Artikel 220. https://doi.org/10.3390/microorganisms10020220
Ng, K.-S., Chang, Y.-C., Chen, Y.-P., Lo, Y.-H., Wang, S.-Y. & Chen, M.-J. (2022). Characterization of exopolysaccharide-producing lactic acid bacteria from Taiwanese ropy fermented milk and their application in low-fat fermented milk. Animal Bioscience, 35(2), 281-289. https://doi.org/10.5713/ab.21.0251
Wang, S.-Y., Huang, R.-F., Ng, K.-S., Chen, Y.-P., Shiu, J.-S. & Chen, M.-J. (2021). Co-Culture Strategy of Lactobacillus kefiranofaciens HL1 for Developing Functional Fermented Milk. Foods, 10(9), 2098. Artikel 2098. https://doi.org/10.3390/foods10092098
Khider, M. L. K., Brautaset, T. & Irla, M. (2021). Methane monooxygenases: central enzymes in methanotrophy with promising biotechnological applications. World Journal of Microbiology and Biotechnology, 37(4), Artikel 72. https://doi.org/10.1007/s11274-021-03038-x
Irla, M., Hakvåg, S. & Brautaset, T. (2021). Developing a riboswitch-mediated regulatory system for metabolic flux control in thermophilic bacillus methanolicus. International Journal of Molecular Sciences , 22(9), Artikel 4686. https://doi.org/10.3390/ijms22094686
Brito, L. F., Irla, M., Nærdal, I., Le, S. B., Delépine, B., Heux, S. & Brautaset, T. (2021). Evaluation of Heterologous Biosynthetic Pathways for Methanol-Based 5-Aminovalerate Production by Thermophilic Bacillus methanolicus. Frontiers in Bioengineering and Biotechnology, 9, Artikel 686319. https://doi.org/10.3389/fbioe.2021.686319
Gruenberg, M., Irla, M., Myllek, S. & Draths, K. (2021). Characterization of two 3-deoxy-D-Arabino-Heptulosonate 7-phosphate synthases from Bacillus methanolicus. Protein Expression and Purification, 188, Artikel 105972. https://doi.org/10.1016/j.pep.2021.105972
Zhang, N., Müller, B., Kirkeby, T. Ø., Kara, S. & Loderer, C. (2022). Development of a thioredoxin based cofactor regeneration system for NADPH-dependent oxidoreductases. ChemCatChem, 14(7), Artikel e202101625. https://doi.org/10.1002/cctc.202101625
Bonefeld, B. E., Lawther, M., Kristensen, C., Bentsen, N. S., Jørgensen, U. & Ambye-Jensen, M. (2019). MAN-MADE TEXTILE FIBRE OF NON-WOOD SIDESTREAM BIOMASS: - GRØNNE HOSER INBIOM PROJECT -. Poster-session præsenteret på Circular Bioeconomy Days 2019, Foulum, Danmark. https://conferences.au.dk/fileadmin/conferences/2019/bioeconomy/Posters/Birgit_Bonefeld_Man-made_textile_fibre_of_nonwood_biomass_sidestream_-_Final.pdf
Garcia Soriano, D. A., Andersen, F. D., Nygaard, J. V. & Tørring, T. (2021). ColFeatures: Automated data extraction and classification of bacterial colonies. bioRxiv. https://doi.org/10.1101/2021.05.27.445853
Meyer, J., Meyer, L.-E. & Kara, S. (2022). Enzyme immobilization in hydrogels: A perfect liaison for efficient and sustainable biocatalysis. Engineering in Life Sciences, 22(3-4), 165-177. https://doi.org/10.1002/elsc.202100087
Zhang, Y., Breum, N. M. D., Schubert, S., Hashemi, N., Kyhnau, R., Knauf, M. S., Mathialakan, M., Takeuchi, M., Kishino, S., Ogawa, J., Kristensen, P., Guo, Z. & Eser, B. E. (2022). Semi-rational Engineering of a Promiscuous Fatty Acid Hydratase for Alteration of Regioselectivity. ChemBioChem, 23(4), Artikel e202100606. https://doi.org/10.1002/cbic.202100606
Rodriguez-Dominguez, M. A., Bonefeld, B. E., Ambye-Jensen, M., Brix, H. & Arias, C. A. (2022). The use of treatment wetlands plants for protein and cellulose valorization in biorefinery platform. Science of the Total Environment, 810, Artikel 152376. https://doi.org/10.1016/j.scitotenv.2021.152376
Chanquia, S. N., Valotta, A., Gruber-Woelfler, H. & Kara, S. (2021). Photobiocatalysis in continuous flow. Frontiers in Catalysis, 1. https://doi.org/10.3389/fctls.2021.816538/abstract
Asare, P. T., Greppi, A., Pennacchia, A., Brenig, K., Geirnaert, A., Schwab, C., Stephan, R. & Lacroix, C. (2021). In vitro Modeling of Chicken Cecal Microbiota Ecology and Metabolism Using the PolyFermS Platform. Frontiers in Microbiology, 12, Artikel 780092. https://doi.org/10.3389/fmicb.2021.780092

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Revideret 20.03.2026
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AU Engineering