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Department of Biological and Chemical Engineering

Publications by Industrial Biotechnology

Are you looking for publications by Section of Industrial Biotechnology? On this page you can find all the publications made by the Section of Industrial Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Zhong, C., He, Y., Zheng, G. & Chen, B. (2020). 两步法催化鱼油制备MLM型结构三酰甘油酯. Journal of the Chinese Cereals and Oils Association, 35(10), 141-147, 154.

Yang, J., Gao, R., Zhou, Y., Anankanbil, S., Li, J., Xie, G. & Guo, Z. (2018). β-Glucosidase from Thermotoga naphthophila RKU-10 for exclusive synthesis of galactotrisaccharides: Kinetics and thermodynamics insight into reaction mechanism. Food Chemistry, 240, 422-429. https://doi.org/10.1016/j.foodchem.2017.07.155

Lopez Fetzer, D. E., Andrade, T. A. & Ambye-Jensen, M. (2024). Xylose, Glucose and Fructose Extraction from Different Herbaceous Crops in a Green Biorefinery Demonstration Platform: a Comparative Study. Chemical Engineering Transactions, 109, 235-240. https://doi.org/10.3303/CET24109040

Schmid, J. M., Skjold, T., Kolstad, H. A., Miehe, M., Spillner, E. & Hoffmann, H. J. (2019). Work-related allergic asthma: Clinical work-up of a 45-year old male working in animal feed producing industry. Allergy: European Journal of Allergy and Clinical Immunology, 74, 316-316.

de Jonge, N., Poulsen, J. S., Vechi, N. T., Kofoed, M. V. W. & Nielsen, J. L. (2022). Wood-Ljungdahl pathway utilisation during in situ H₂ biomethanation. Science of the Total Environment, 806(Part 3), Article 151254. https://doi.org/10.1016/j.scitotenv.2021.151254

Barbato, M., Vacchini, V., Engelen, A. H., Patania, G., Mapelli, F., Borin, S. & Crotti, E. (2022). What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria. AMB Express, 12(1), Article 98. https://doi.org/10.1186/s13568-022-01440-8

İlyasoğlu, H. & Guo, Z. (2019). Water soluble chitosan-caffeic acid conjugates as a dual functional polymeric surfactant. Food Bioscience, 29(June), 118-125. https://doi.org/10.1016/j.fbio.2019.04.007

Cheng, W., Anankanbil, S., Pérez, B., ILYASOGLU, H., Liu, G. & Guo, Z. (2019). Water-mediated catalyst-free synthesis of lysine-based ampholytic amphiphiles for multipurpose applications: Characterization and pH-responsive emulsifying properties. Journal of Colloid and Interface Science, 554, 404-416. https://doi.org/10.1016/j.jcis.2019.06.104

Jensen, M., Kofoed, M. V. W., Fischer, K., Voigt, N. V., Agneessens, L., Batstone, D. J. & Ottosen, L. D. M. (2018). Venturi-type injection system as a potential H2 mass transfer technology for full-scale in situ biomethanation. Applied Energy, 222, 840-846. https://doi.org/10.1016/j.apenergy.2018.04.034

Riverol, A. P., Miehe, M., Jabs, F., Seismann, H., Romani Fernandes, L. G., de Lima Zollner, R., Jakob, T., Brochetto-Braga, M. R. & Spillner, E. (2018). Venoms of Neotropical wasps lack cross-reactive carbohydrate determinants enabling reliable protein-based specific IgE determination. Journal of Allergy and Clinical Immunology, 141(5), 1917-1919.e1. https://doi.org/10.1016/j.jaci.2017.12.990

Li, J. & Guo, Z. (2017). Valorizing Waste Streams by Integrated Biorefining Process. Abstract from 108th AOCS Annual Meeting, Orlando, Florida, United States.

Yang, J., Pérez, B., Anankanbil, S., Li, J., Zhou, Y., Gao, R. & Guo, Z. (2017). Valorizing Dairy Waste: Thermophilic Biosynthesis of a Novel Ascorbic Acid Derivative. Journal of Agricultural and Food Chemistry, 65(41), 9087-9093. https://doi.org/10.1021/acs.jafc.7b03173

Larsen, C. K., Lindquist, P., Rosenkilde, M., Madsen, A. R., Haselmann, K., Glendorf, T., Olesen, K., Kodal, A. L. B. & Tørring, T. (2024). Using LanM Enzymes to Modify Glucagon-Like Peptides 1 and 2 in E. coli. ChemBioChem, 25(13), Article e202400201. https://doi.org/10.1002/cbic.202400201

Gkantzou, E., Koulopoulou, T., Brass, H., Schönauer, D., Glieder, A. & Kara, S. (2024). Unspecific peroxygenase immobilization in 3D-printed microfluidics: towards tailor-made screening platforms. Catalysis Science and Technology, 14(22), 6496-6502. https://doi.org/10.1039/d4cy00869c

Klein, V. J., Irla, M., López, M. G., Brautaset, T. & Brito, L. F. (2022). Unravelling Formaldehyde Metabolism in Bacteria: Road towards Synthetic Methylotrophy. Microorganisms, 10(2), Article 220. https://doi.org/10.3390/microorganisms10020220

Pham, T. H., Thomas, R., Schwab, C., Martinez, M. M. & Vidal, N. P. (2024). Unraveling the neutral and polar lipidome of Nordic brown macroalgae: A sustainable source of functional lipids. Food Chemistry, 459, Article 140415. https://doi.org/10.1016/j.foodchem.2024.140415

Sieborg, M. U., Engelbrecht, N., Singh, A., Schnürer, A., Ottosen, L. D. M. & Kofoed, M. V. W. (2025). Unraveling the effects of temperature on mass transfer and microbiology in thermophilic and extreme thermophilic trickle bed biomethanation reactors. Chemical Engineering Journal, 509, Article 161179. https://doi.org/10.1016/j.cej.2025.161179

Zhang, N., Bittner, J. P., Fiedler, M., Beretta, T., De María, P. D., Jakobtorweihen, S. & Kara, S. (2022). Unraveling Alcohol Dehydrogenase Catalysis in Organic-Aqueous Biphasic Systems Combining Experiments and Molecular Dynamics Simulations. ACS Catalysis, 12(15), 9171-9180. https://doi.org/10.1021/acscatal.2c02881

Villadsen, N. L., Jacobsen, K. M., Tørring, T. & Poulsen, T. (2017). Unikke naturstoffer dræber resistente cancerceller. Dansk Kemi, 98(3), 10-13. http://ipaper.ipapercms.dk/TechMedia/DanskKemi/2017/3/

Svenningsen, T. (2024). Uncovering the biosynthesis of the non-canonical lasso peptide Triculamin through in vitro reconstitution. Poster session presented at 4th Synthetic Biology of Natural Products Conference, Cancun, Mexico.

Saad, A., Bai, L., Christensen, F. M. S., Luo, S., Bentien, A., Ashokkumar, M. & Wei, Z. (2025). Ultrasound-enhanced alkaline water splitting with fast bubble release and sustained Ni catalysts. Applied Catalysis B: Environmental, 370, Article 125152. https://doi.org/10.1016/j.apcatb.2025.125152

Andrade, T. A., Hamerski, F., López Fetzer, D. E., Roda-Serrat, M. C., Corazza, M. L., Norddahl, B. & Errico, M. (2021). Ultrasound-assisted pressurized liquid extraction of anthocyanins from Aronia melanocarpa pomace. Separation and Purification Technology, 276, Article 119290. https://doi.org/10.1016/j.seppur.2021.119290

Pérez, B., Bulsara, P., Rawlings, A. V., Wei, W., Jensen, M. M., Wang, Z., Dickens, J., Zhang, S., P. Elliot, R., Glasius, M., Dong, MD., Clarke, M. & Guo, Z. (2016). Ultralong Fatty Acyl Derivatives As Occlusive Structure Lipids for Cosmetic Applications: Synthesis and Characterization. ACS Sustainable Chemistry & Engineering, 4(12), 7137–7146. https://doi.org/10.1021/acssuschemeng.6b02021

Zhou, P., Liu, W., Zhang, Y., Liu, G., Zhao, Z., Zhang, M., Wei , Z., Zhang, Y., Tang, X., Li, P., Deng, Y., Zhang, M. & Guo, Z. (2023). Tuning multi-purpose glycerol-based deep eutectic solvents for biocatalytic deacidification of high-acid rice bran oil: Kinetics, mechanism, and inhibition of side glycerolysis. LWT - Food Science and Technology, 189, Article 115535. https://doi.org/10.1016/j.lwt.2023.115535

Bialik, O. M., Bookman, R., Elyashiv, H., Marietou, A., Saar, R., Rivlin, T., Taha, N., Benaltabet, T., Lotem, N., Funaro, E. & Antler, G. (2022). Tropical storm-induced disturbance of deep-water porewater profiles, Gulf of Aqaba. Marine Geology, 453, Article 106926. https://doi.org/10.1016/j.margeo.2022.106926

Andersen, F. D., Pedersen, K. D., Wilkens Juhl, D., Mygind, T., Chopin, P., B. Svenningsen, E., Poulsen, T. B., Braad Lund, M., Schramm, A., Gotfredsen, C. H. & Tørring, T. (2022). Triculamin: An Unusual Lasso Peptide with Potent Antimycobacterial Activity. Journal of Natural Products, 85(6), 1514-1521. https://doi.org/10.1021/acs.jnatprod.2c00065

Jabs, F., Plum, M., Laursen, N. S., Jensen, R. K., Mølgaard, B., Miehe, M., Mandolesi, M., Rauber, M. M., Pfützner, W., Jakob, T., Möbs, C., Andersen, G. R. & Spillner, E. (2018). Trapping IgE in a closed conformation by mimicking CD23 binding prevents and disrupts FcεRI interaction. Nature Communications, 9(1), Article 7. https://doi.org/10.1038/s41467-017-02312-7

Lara, A. R., Kunert, F., Vandenbroucke, V., Taymaz-Nikerel, H., Martínez, L. M., Sigala, J. C., Delvigne, F., Gosset, G. & Büchs, J. (2024). Transport-controlled growth decoupling for self-induced protein expression with a glycerol-repressible genetic circuit. Biotechnology and Bioengineering, 121(6), 1789-1802. https://doi.org/10.1002/bit.28697

Jurkas, V., Weissensteiner, F., De Santis, P., Vrabl, S., A. Sorgenfrei, F., Bierbaumer, S., Kara, S., Kourist, R., P. Wangikar, P., Winkler, C. K. & Kroutil, W. (2022). Transmembrane Shuttling of Photosynthetically Produced Electrons to Propel Extracellular Biocatalytic Redox Reactions in a Modular Fashion. Angewandte Chemie, 61(40), Article e202207971. https://doi.org/10.1002/anie.202207971

Zhang, M., Gao, Y., Yu, C., Wang, J., Weng, K., Li, Q., He, Y., Guo, Z., Zhang, H., Huang, J. & Li, L. (2022). Transcriptome analysis of malate-induced Schizochytrium sp. FJU-512 reveals a novel pathway for biosynthesis of docosahexaenoic acid with enhanced expression of genes responsible for acetyl-CoA and NADPH accumulation. Frontiers in Microbiology, 13, Article 1006138. https://doi.org/10.3389/fmicb.2022.1006138

Li, Q., Ruscheweyh, H. J., Østergaard, L. H., Libertella, M., Simonsen, K. S., Sunagawa, S., Scoma, A. & Schwab, C. (2024). Trait-based study predicts glycerol/diol dehydratases as a key function of the gut microbiota of hindgut-fermenting carnivores. Microbiome, 12, Article 178. https://doi.org/10.1186/s40168-024-01863-4

Schwab, C. & Bambace, M. F. (2024). Traditional and novel applications of sourdough microbes in Northern Europe and the Baltic countries. In Sourdough Microbiota and Starter Cultures for Industry (pp. 93-129). Springer International Publishing. https://doi.org/10.1007/978-3-031-48604-3_4

Panpipat, W., Xu, X. & Guo, Z. (2012). Towards a commercially potential process: Enzymatic recovery of phytosterols from plant oil deodoriser distillates mixture. Process Biochemistry, 47(8), 1256-1262. https://doi.org/10.1016/j.procbio.2012.04.024

Huang, L., Dominguez De Maria, P. & Kara, S. (2018). The ‘water challenge’: Opportunities and challenges of using oxidoreductases in non-conventional media. Chimica Oggi-Chemistry Today, 36(2), 48-56. http://www.teknoscienze.com/tks_article/the-water-challenge-opportunities-and-challenges-of-using-oxidoreductases-in-non-conventional-media/

Rodriguez-Dominguez, M. A., Bonefeld, B. E., Ambye-Jensen, M., Brix, H. & Arias, C. A. (2022). The use of treatment wetlands plants for protein and cellulose valorization in biorefinery platform. Science of the Total Environment, 810, Article 152376. https://doi.org/10.1016/j.scitotenv.2021.152376

Yesiltas, B., Garcia-Moreno, P. J., Sørensen, A.-D. M., Banerjee, C., Anankanbil, S., Guo, Z., Ogilby, P. R. & Jacobsen, C. (2023). The Use of Soy and Egg Phosphatidylcholines Modified with Caffeic Acid Enhances the Oxidative Stability of High-Fat (70%) Fish Oil-in-Water Emulsions. Colloids and Interfaces , 7(3), Article 60. https://doi.org/10.3390/colloids7030060

Kleikamp, H. B. C., Palacios, P. A., Kofoed, M. V. W., Papacharalampos, G., Bentien, A. & Nielsen, J. L. (2024). The Selenoproteome as a Dynamic Response Mechanism to Oxidative Stress in Hydrogenotrophic Methanogenic Communities. Environmental Science & Technology, 58(15), 6637-6646. https://doi.org/10.1021/acs.est.3c07725

Panpipat, W., Dong, M., Xu, X. & Guo, Z. (2013). Thermal properties and nanodispersion behavior of synthesized β-sitosteryl acyl esters: A structure-activity relationship study. Journal of Colloid and Interface Science, 407, 177-186. https://doi.org/10.1016/j.jcis.2013.06.030

De Santis, P., Meyer, L.-E. & Kara, S. (2020). The Rise of Continuous Flow Biocatalysis – Fundamentals, Very Recent Developments and Future Perspectives. Reaction Chemistry & Engineering , 5(12), 2155-2184. https://doi.org/10.1039/D0RE00335B

Agneessens, L., Ottosen, L. D. M., Andersen, M., Berg Olesen, C. & Kofoed, M. V. W. (2018). The relevance of homoacetogenesis during biomethanation of surplus electricity in anaerobic digesters. In Slude Management in Circular Economy: Abstract book

Haest, P. J., Philips, J., Springael, D. & Smolders, E. (2011). The reactive transport of trichloroethene is influenced by residence time and microbial numbers. Journal of Contaminant Hydrology, 119(1-4), 89-98. https://doi.org/10.1016/j.jconhyd.2010.09.011

Choi, J., Kim, Y., Eser, B. E. & Han, J. (2023). Theoretical study on the glycosidic C-C bond cleavage of 3''-oxo-puerarin. Scientific Reports, 13(1), Article 16282. https://doi.org/10.1038/s41598-023-43379-1

Yong-Jin, H., Li, J., Kodali, S., Chen, B. & Guo, Z. (2016). The near-ideal catalytic property of Candida antarctica lipase A to highly concentrate n-3 polyunsaturated fatty acids in monoacylglycerols via one-step ethanolysis of triacylglycerols. Bioresource Technology, 219, 466-478. https://doi.org/10.1016/j.biortech.2016.08.007

Zhang, H., Lopez, P. C., Holland, C., Lunde, A., Ambye-Jensen, M., Felby, C. & Thomsen, S. T. (2018). The multi-feedstock biorefinery – Assessing the compatibility of alternative feedstocks in a 2G wheat straw biorefinery process. GCB Bioenergy, 10(12), 946-959. https://doi.org/10.1111/gcbb.12557

Rauber, M., Roßbach, A., Jung, A., Müller, S., Möbs, C., Pfützner, W., Miehe, M., Spillner, E. & Jakob, T. (2020). The honey bee venom allergen Api m 10 displays one major IgE epitope, Api m 10160-174. Allergy: European Journal of Allergy and Clinical Immunology, 75(7), 1756-1759. https://doi.org/10.1111/all.14187

Pellerin, A., Antler, G., Marietou, A., Turchyn, A. V. & Jørgensen, B. B. (2020). The effect of temperature on sulfur and oxygen isotope fractionation by sulfate reducing bacteria (Desulfococcus multivorans). FEMS Microbiology Letters, 367(9), Article fnaa061. https://doi.org/10.1093/femsle/fnaa061

Marietou, A., Schmidt, J. S., Rasmussen, M. R., Scoma, A., Rysgaard, S. & Vergeynst, L. (2023). The effect of hydrostatic pressure on the activity and community composition of hydrocarbon-degrading bacteria in Arctic seawater. Applied and Environmental Microbiology, 89(11), Article e0098723. https://doi.org/10.1128/aem.00987-23

Marietou, A., Chastain, R., Beulig, F., Scoma, A., Hazen, T. C. & Bartlett, D. H. (2018). The Effect of Hydrostatic Pressure on Enrichments of Hydrocarbon Degrading Microbes From the Gulf of Mexico Following the Deepwater Horizon Oil Spill. Frontiers in Microbiology, 9(APR), Article 808. https://doi.org/10.3389/fmicb.2018.00808

Schwab, C. (2022). The development of human gut microbiota fermentation capacity during the first year of life. Microbial Biotechnology, 15(12), 2865-2874. https://doi.org/10.1111/1751-7915.14165

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., M. Hacker, S. & Poulsen, T. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. Poster session presented at EMBO Chemical Biology, Heidelberg, Germany.

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