Publications by Bioprocess Engineering

Are you looking for publications by Section of Bioprocess Engineering? On this page you can find all the publications made by the Section of Bioprocess Engineering - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Ambye-Jensen, M., (2022). Arealanvendelse og bioøkonomi. Synergier og systemgevinster ved ændret arealanvendelse og bioraffinering, Nr. 2022-0340167 / 2020-0114173, 34 s., feb. 11, 2022. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Gaffey, J., Rajauria, G., McMahon, H., Ravindran, R., Dominguez, C., Ambye-Jensen, M., Souza, M. F., Meers, E., Aragonés, M. M., Skunca, D. & Sanders, J. P. M. (2023). Green Biorefinery systems for the production of climate-smart sustainable products from grasses, legumes and green crop residues. Biotechnology Advances, 66, Artikel 108168. https://doi.org/10.1016/j.biotechadv.2023.108168

Munoz Duarte, L. D. & Philips, J. (2023). No acetogen is equal: Strongly different H₂ thresholds reflect diverse bioenergetics in acetogenic bacteria. Environmental Microbiology, 25(10), 2032-2040. https://doi.org/10.1111/1462-2920.16429

Jørgensen, U., Jensen, S. K. & Ambye-Jensen, M. (2023). Coupler les avantages des cultures herbagères et du bioraffinage vert pour produire des protéines, des matériaux et des services pour la transition écologique. Fourrages , 253, 47-60.

Feilberg, A., Ambrose, H. W., Dalby, F. R. & Kofoed, M. V. W. (2023). Residual slurry treatment combined with weekly discharge: Elimination of in-house methane emission in livestock facilities. Abstract fra Agri Food and Climate Circle 2023, København, Danmark.

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Additives and methods for the mitigation of methane emission from stored liquid manure. Biosystems Engineering, 229, 209-245. https://doi.org/10.1016/j.biosystemseng.2023.03.015

Klein, V. J., Brito, L. F., Perez-Garcia, F., Brautaset, T. & Irla, M. (2023). Metabolic engineering of thermophilic Bacillus methanolicus for riboflavin overproduction from methanol. Microbial Biotechnology, 16(5), 1011-1026. https://doi.org/10.1111/1751-7915.14239

Alphand, V., van Berkel, W. J. H., Jurkas, V., Kara, S., Kourist, R., Kroutil, W., Mascia, F., M. Nowaczyk, M., Paul, C. E., Schmidt, S., Spasic, J., Tamagnini, P. & Winkler, C. K. (2023). Exciting Enzymes: Current State and Future Perspective of Photobiocatalysis. ChemPhotoChem, 7(7), Artikel e202200325. https://doi.org/10.1002/cptc.202200325

Gao, P., Zhang, X., Huang, X., Chen, Z., Marietou, A., Holmkvist, L., Qu, L., Finster, K. & Gong, X. (2023). Genomic insight of sulfate reducing bacterial genus Desulfofaba reveals their metabolic versatility in biogeochemical cycling. BMC Genomics, 24(1), Artikel 209. https://doi.org/10.1186/s12864-023-09297-2

Semproli, R., Chanquia, S. N., Bittner, J. P., Müller, S., Domínguez de María, P., Kara, S. & Ubiali, D. (2023). Deep Eutectic Solvents for the Enzymatic Synthesis of Sugar Esters: A Generalizable Strategy? ACS Sustainable Chemistry & Engineering, 11(15), 5926-5936. https://doi.org/10.1021/acssuschemeng.2c07607

Meyer, L.-E., Horvath, D., Vaupel, S., Meyer, J., Alcalde, M. & Kara, S. (2023). A 3D printable synthetic hydrogel as an immobilization matrix for continuous synthesis with fungal peroxygenases. Reaction Chemistry & Engineering , 8(5), 984-988. https://doi.org/10.1039/d3re00058c

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., Hacker, S. M., Palmfeldt, J. & Poulsen, T. B. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. RSC Chemical Biology, 3(10), 1216-1229. https://doi.org/10.1039/d2cb00161f

Schulz, S., Molitor, B. & Angenent, L. T. (2023). Acetate augmentation boosts the ethanol production rate and specificity by Clostridium ljungdahlii during gas fermentation with pure carbon monoxide. Bioresource Technology, 369, Artikel 128387. https://doi.org/10.1016/j.biortech.2022.128387

Li, Z., Zhang, G., Charalampopoulos, D. & Guo, Z. (2023). Ionic liquid-mediated regeneration of cellulose dramatically improves decrystallization, TEMPO-mediated oxidation and alkyl/alkenyl succinylation. International Journal of Biological Macromolecules, 236, Artikel 123983. https://doi.org/10.1016/j.ijbiomac.2023.123983

Xiong, X., Shang, Y., Bai, L., Luo, S., Seviour, T. W., Guo, Z., Ottosen, L. D. M. & Wei, Z. (2023). Complete Defluorination of Perfluorooctanoic Acid (PFOA) by Ultrasonic Pyrolysis Towards Zero Fluoro-Pollution. Water Research, 235, Artikel 119829. https://doi.org/10.1016/j.watres.2023.119829

Santner, P., Chanquia, S. N., Petrovai, N., Vig Benfeldt, F., Kara, S. & Eser, B. E. (2023). Biocatalytic Conversion of Fatty Acids into Drop-in Biofuels: Towards Sustainable Energy Sources. EFB Bioeconomy Journal, 3, Artikel 100049. https://doi.org/10.1016/j.bioeco.2023.100049

Milic, M., Domínguez de María, P. & Kara, S. (2023). A patent survey on the biotechnological production of 2,5-furandicarboxylic acid (FDCA): Current trends and challenges. EFB Bioeconomy Journal, 3, Artikel 100050. https://doi.org/10.1016/j.bioeco.2023.100050

Vernet, G., Ma, Y., Zhang, N. & Kara, S. (2023). Cross-linked enzyme aggregates of fusion enzymes in microaqueous organic media. ChemBioChem, 24(8), Artikel e202200794. https://doi.org/10.1002/cbic.202200794

Pikaar, I., Hülsen, T. & Angenent, L. T. (2023). Editorial overview: The future of food biotechnology is microbial. Current Opinion in Biotechnology, 80, Artikel 102889. https://doi.org/10.1016/j.copbio.2022.102889

T. M. Henehan, G., Ryan, B. J., Eser, B. E., Li, N., Guo, Z. & Kinsella, G. K. (2023). Editorial: Green chemistry biocatalysis. Frontiers in Bioengineering and Biotechnology, 11, Artikel 1158275. https://doi.org/10.3389/fbioe.2023.1158275

Bogojevic, O., Zhang, Y., Wolff, C. D., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). Phospholipase D-Catalyzed Transphosphatidylation for the Synthesis of Rare Complex Phospholipid Species─Hemi-bis(monoacylglycero)phosphate and Bis(diacylglycero)phosphate. ACS Sustainable Chemistry & Engineering, 11(8), 3506-3516. https://doi.org/10.1021/acssuschemeng.2c07477

Li, L., Li, Z., Balle, T., Liu, G. & Guo, Z. (2023). Biosynthesis of pectic oligosaccharide-based amphiphiles as novel stabilizers of nanoemulsions by coupling enzymatic depolymerization with alkyl/alkenyl succinylation. Food Hydrocolloids, 139, Artikel 108574. https://doi.org/10.1016/j.foodhyd.2023.108574

Hansen, N. P., Jensen, S. K., Johansen, M., Hellwing, A. L. F., Ambye-Jensen, M., Larsen, M. & Weisbjerg, M. R. (2023). Fiber digestibility and protein value of pulp silage for lactating dairy cows: Effects of wet fractionation by screw pressing of perennial ryegrass. Journal of Dairy Science, 106(2), 937-953. https://doi.org/10.3168/jds.2022-21851

Zhang, N., Bittner, J. P., Fiedler, M., Beretta, T., De María, P. D., Jakobtorweihen, S. & Kara, S. (2022). Unraveling Alcohol Dehydrogenase Catalysis in Organic-Aqueous Biphasic Systems Combining Experiments and Molecular Dynamics Simulations. ACS Catalysis, 12(15), 9171-9180. https://doi.org/10.1021/acscatal.2c02881

Jørgensen, U., Jensen, S. K. & Ambye-Jensen, M. (2022). Coupling the benefits of grassland crops and green biorefining to produce protein, materials and services for the green transition. Grass and Forage Science, 77(4), 295-306. https://doi.org/10.1111/gfs.12594

Li, Z., Anankanbil, S., Pedersen, J. N., Nadzieja, M. & Guo, Z. (2023). Nanocellulose fractionated from TEMPO-mediated oxidation of cellulose as an energy-free ingredient for stabilizing Pickering emulsion. Biochemical Engineering Journal, 191, Artikel 108795. https://doi.org/10.1016/j.bej.2022.108795

Ramirez Garcia, A., Hurley, K., Marastoni, G., Diard, M., Hofer, S., Greppi, A., Hardt, W.-D., Lacroix, C., Sturla, S. J. & Schwab, C. (2022). Pathogenic and Commensal Gut Bacteria Harboring Glycerol/Diol Dehydratase Metabolize Glycerol and Produce DNA-Reactive Acrolein. Chemical Research in Toxicology, 35(10), 1840-1850. https://doi.org/10.1021/acs.chemrestox.2c00137

Rocha Martin, V. N., Del’Homme, C., Chassard, C., Schwab, C., Braegger, C., Bernalier-Donadille, A. & Lacroix, C. (2022). A proof of concept infant-microbiota associated rat model for studying the role of gut microbiota and alleviation potential of Cutibacterium avidum in infant colic. Frontiers in nutrition, 9, Artikel 902159. https://doi.org/10.3389/fnut.2022.902159

Zhang, J. & Schwab, C. (2022). Is acrolein a reuterin-borne chemical hazard in biopreserved foods? Food Chemistry Advances, 1, Artikel 100044. https://doi.org/10.1016/j.focha.2022.100044

Schwab, C. (2022). The development of human gut microbiota fermentation capacity during the first year of life. Microbial Biotechnology, 15(12), 2865-2874. https://doi.org/10.1111/1751-7915.14165

Stødkilde-Jørgensen, L., Mogensen, L., Bache, J. K., Ambye-Jensen, M., Vinther, J. & Jensen, S. K. (2023). Local protein sources for growing-finishing pigs and their effects on pig performance, sensory quality and climate impact of the produced pork. Livestock Science, 267, Artikel 105128. https://doi.org/10.1016/j.livsci.2022.105128

Sasaki, M., Schwab, C., Ramirez Garcia, A., Li, Q., Ferstl, R., Bersuch, E., Akdis, C. A., Lauener, R., Frei, R., Roduit, C. & CK-CARE study group (2022). The abundance of Ruminococcus bromii is associated with faecal butyrate levels and atopic dermatitis in infancy. Allergy: European Journal of Allergy and Clinical Immunology, 77(12), 3629-3640. https://doi.org/10.1111/all.15440

Pérez-García, F., Brito, L. F., Irla, M., Jorge, J. M. P. & Sgobba, E. (2022). Editorial: Promising and sustainable microbial feedstocks for biotechnological processes. Frontiers in Microbiology, 13, Artikel 973723. https://doi.org/10.3389/fmicb.2022.973723

Ambye-Jensen, M., (2022). Støtte til kvalificering af bioraffineringsprojekter – Del 2, Nr. 2022-0356347, 6 s., nov. 24, 2022. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Abd El-Maksoud, A. A., Cheng, W., Petersen, S. V., Pandiselvam, R. & Guo, Z. (2022). Covalent phenolic acid-grafted β-lactoglobulin conjugates: Synthesis, characterization, and evaluation of their multifunctional properties. LWT - Food Science and Technology, 172, Artikel 114215. https://doi.org/10.1016/j.lwt.2022.114215

Thomsen, T. H., Jørgensen, L. B., Kjær, T. W., Haahr, A., Vogel, A., Larsen, I. U. & Winge, K. (2022). Clinical Markers of 6 Pre-dominant Coping Behaviors in Living With Parkinson Disease: A Convergent Mixed Methods Study. Inquiry, 59. https://doi.org/10.1177/00469580221129929

Aagaard, J. B., Fischer, M., Lober, J., Bolbro Neumann, F., Allahverdi, D., Sivelle, C., Miehe, M. & Spillner, E. (2023). Extract-shaped immune repertoires as source for nanobody-based human IgE in grass pollen allergy. Molecular Biotechnology, 65(9), 1518-1527. https://doi.org/10.1007/s12033-023-00664-8

Terlouw, B. R., Blin, K., Navarro-Muñoz, J. C., Avalon, N. E., Chevrette, M. G., Egbert, S., Lee, S., Meijer, D., Recchia, M. J. J., Reitz, ZL., van Santen, JA., Selem-Mojica, N., Tørring, T., Zaroubi, L., Alanjary, M., Aleti, G., Aguilar, C., Al-Salihi, S. A. A., Augustijn, HE. ... Medema, MH. (2023). MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters. Nucleic Acids Research, 51(D1), D603-D610. Artikel gkac1049. https://doi.org/10.1093/nar/gkac1049

Bialik, O. M., Bookman, R., Elyashiv, H., Marietou, A., Saar, R., Rivlin, T., Taha, N., Benaltabet, T., Lotem, N., Funaro, E. & Antler, G. (2022). Tropical storm-induced disturbance of deep-water porewater profiles, Gulf of Aqaba. Marine Geology, 453, Artikel 106926. https://doi.org/10.1016/j.margeo.2022.106926

Meyer, L.-E., Hobisch, M. & Kara, S. (2022). Process intensification in continuous flow biocatalysis by up and downstream processing strategies. Current Opinion in Biotechnology, 78, Artikel 102835. https://doi.org/10.1016/j.copbio.2022.102835

Zhang, M., Gao, Y., Yu, C., Wang, J., Weng, K., Li, Q., He, Y., Guo, Z., Zhang, H., Huang, J. & Li, L. (2022). Transcriptome analysis of malate-induced Schizochytrium sp. FJU-512 reveals a novel pathway for biosynthesis of docosahexaenoic acid with enhanced expression of genes responsible for acetyl-CoA and NADPH accumulation. Frontiers in Microbiology, 13, Artikel 1006138. https://doi.org/10.3389/fmicb.2022.1006138

Nahuel Chanquia, S., Vig Benfeldt, F., Petrovai, N., Santner, P., Hollmann, F., Eser, B. E. & Kara, S. (2022). Immobilization and Application of Fatty Acid Photodecarboxylase in Deep Eutectic Solvents. ChemBioChem, 23(23), Artikel e202200482. https://doi.org/10.1002/cbic.202200482

Jørgensen, U., Jensen, S. K. & Ambye-Jensen, M. (2022). Coupling the benefits of grassland crops and green biorefining to produce protein, products and services for the green transition. I I. Delaby, R. Beaumont, V. Brocard, S. Lemauviel-Lavenant, S. Plantureux, F. Vertès & J. I. Peyraud (red.), Grassland at the heart of circular and sustainable food systems (s. 83-94). INRAE. https://www.europeangrassland.org/fileadmin/documents/Infos/Printed_Matter/Proceedings/EGF2022.pdf

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Guo, Z., Kiens, B. & Wiking, L. (2022). SPECIAL MILK LIPIDS FOR HEALTH (SMiL) - COMBINED FRACTIONATION PROCEDURES TO OBTAIN MILK FAT FRACTIONS WITH HEALTH BENEFICIAL PROFILES. Poster-session præsenteret på Arla Food for Health Conference 2022, Viby, Danmark.

Dalby, F. R., Kofoed, M. V. W., Guldberg, L. B. & Feilberg, A. (2022). Acidification with inorganic and organic acids to reduce greenhouse gas emission from pig slurry: Acidification with inorganic and organic acids to reduce greenhouse gas emission from pig slurry. Abstract fra 8th International Greenhouse Gas & Animal Agriculture Conference, Orlando, USA.

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., M. Hacker, S. & Poulsen, T. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. Poster-session præsenteret på EMBO Chemical Biology, Heidelberg, Tyskland.

Rasmussen, C., Mortensen, E. Ø., Wenzel, H., Ambye-Jensen, M. & Jørgensen, U. (2022). Scenarier for anvendelse af biomasseressourcer i fremtidens produktionssystemer for fødevarer, energi og materialer inden for rammerne af gældende politik for landbrug, miljø, klima, natur og energi. DCA - Nationalt Center for Fødevarer og Jordbrug. Rådgivningsrapport fra DCA - Nationalt Center for Fødevarer og Jordbrug

Meyer, L.-E., Fogtmann Hauge, B., Müller Kvorning, T., De Santis, P. & Kara, S. (2022). Continuous oxyfunctionalizations catalyzed by unspecific peroxygenase. Catalysis Science & Technology, 12(21), 6473-6485. https://doi.org/10.1039/D2CY00650B

Vernet, G., Hobisch, M. & Kara, S. (2022). Process intensification in oxidative biocatalysis. Current Opinion in Green and Sustainable Chemistry, 38, Artikel 100692. https://doi.org/10.1016/j.cogsc.2022.100692

Jurkas, V., Weissensteiner, F., De Santis, P., Vrabl, S., A. Sorgenfrei, F., Bierbaumer, S., Kara, S., Kourist, R., P. Wangikar, P., Winkler, C. K. & Kroutil, W. (2022). Transmembrane Shuttling of Photosynthetically Produced Electrons to Propel Extracellular Biocatalytic Redox Reactions in a Modular Fashion. Angewandte Chemie, 61(40), Artikel e202207971. https://doi.org/10.1002/anie.202207971

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AU Engineering