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Department of Biological and Chemical Engineering

Publications by Molecular and Cellular Biotechnology

Are you looking for publications by Section of Molecular and Cellular Biotechnology? On this page you can find all the publications made by the Section of Molecular and Cellular Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Svenningsen, T., Merrild, A., Wang, F., Hansen, F. D., Johnson, T. G., Iwase, R., Viennet, T., Larsen, M. K., Link, A. J. & Tørring, T. (2026). Biosynthesis, Structure, and Antibiotic Properties of Gelatinamin A, a Triculamin-Like Lasso Peptide. ChemBioChem, 27(10), Article e70378. https://doi.org/10.1002/cbic.70378

dos Passos, N. H. M., Schultz, P., Sørensen, M. F. & Ambye-Jensen, M. (2026). Production of single cell protein from ryegrass residual liquid fraction in a green biorefinery process. Biocatalysis and Agricultural Biotechnology, 74, Article 104060. https://doi.org/10.1016/j.bcab.2026.104060

Lyu, J., Ding, S., Wolff, C. D., Gao, R. & Guo, Z. (2026). Regio-Stereoselective Synthesis of Galactosyl-sn-2-glycerol by Thermotoga naphthophila Glycosidase-Catalyzed Transglycosylation in a Cosolvent-Mediated System: Kinetic and Thermodynamic Insights. ACS Sustainable Chemistry & Engineering, 14(17), 8221-8232. https://doi.org/10.1021/acssuschemeng.6c00122

Bai, L., Luo, S., Thøgersen, J., Xiong, X., Guo, Z. & Wei, Z. (2026). Mechanistic Insights into Per- and Polyfluoroalkyl Substance (PFAS) Photolysis under Intensified Simulated Solar Light. Environmental Science and Technology, 60(16), 12562-12573. https://doi.org/10.1021/acs.est.5c16178

Schlaiß, C., Baur, S. T., Marsh, J. W., Gemeinhardt, K. & Angenent, L. T. (2026). Genetic modification of Clostridium kluyveri for heterologous n-butanol and n-hexanol production. Applied and Environmental Microbiology, 92(4), Article e0005826. https://doi.org/10.1128/aem.00058-26

Gerstenberger, J., Werbilo, T., Kourist, R. & Kara, S. (2026). High-Yield Expression of Arylmalonate Decarboxylase in Escherichia coli Through High-Cell-Density Cultivation Strategies. ChemBioChem, 27(8), Article e70339. https://doi.org/10.1002/cbic.70339

Elvan Gezer, M., Ayoubi, L., Bruheim, P. & Schwab, C. (2026). Deoxyhexose metabolism of food-related Lactobacillaceae and identification of a distinctive 1,2-propanediol utilization pathway in Liquorilactobacillus ghanensis DSM 18630. Food Microbiology, 139, Article 105118. https://doi.org/10.1016/j.fm.2026.105118

Bechtner, J., Hosek, J. & Schwab, C. (2026). Fecal Material of Captive Wild Animals as Source of CAZymes With Application Potential. ChemBioChem, 27(8), Article e70315. https://doi.org/10.1002/cbic.70315

Panetta, F. G., Bechtner, J., Furch, A., Wefers, D., Rohm, H., Jaros, D., Wagemans, A. M. & Nachtigall, C. (2026). Intrinsic viscosity of uncharged polysaccharides: A comparative study of determination methods. Food Hydrocolloids, 179, Article 112768. https://doi.org/10.1016/j.foodhyd.2026.112768

Ambrose, H. W., Jiang, T., Kofoed, M. V. W. & Mortensen, L. (2026). Water circularity in Power-to-X: strategies for integrating water reuse into emerging energy systems. Current Opinion in Environmental Sustainability, 80, Article 101623. https://doi.org/10.1016/j.cosust.2026.101623

Ashraf, J. Z., Tsochatzis, E. D., Pati, S., Amodio, M. L., Apicella, A., Incarnato, L., Martinez, M. M., Lopez-Rodulfo, I. M. & Colelli, G. (2026). Comprehensive study on the migration on non-intentionally added substances from food contact films of PBS, PLA, and their blends. Food Packaging and Shelf Life, 54, Article 101719. https://doi.org/10.1016/j.fpsl.2026.101719

Ntihuga, J. N., Usack, J. G., Mayer, R., Kinbokun, A. A., Yesil, H., Zhou, M. & Angenent, L. T. (2026). Dried-bakery waste as a substrate for n-caproate and n-caprylate production via chain elongation. Waste Management, 216, Article 115454. https://doi.org/10.1016/j.wasman.2026.115454

Baur, T., Allaart, M. T., Zipperle, A., Contreras, G., Fink, C., Angenent, L. T. & Molitor, B. (2026). Metabolic engineering of Methanothermobacter thermautotrophicus ΔH for recombinant acetoin production. Metabolic Engineering Communications, 22, Article e00275. https://doi.org/10.1016/j.mec.2026.e00275

Hashemi, F., Mogensen, L., Eriksen, J., Ambye-Jensen, M., Andrade, T. A., Møller, H. B., Jørgensen, U., Wahid, R., Dupont, Y. L., Cong, W., Zhen, H., Dorca-Preda, T. & Knudsen, M. T. (2026). Assessing the carbon footprint of leaf protein concentrate and biomethane from organic multispecies grasslands. Abstract from EGU General Assembly 2026, Vienna, Austria. https://doi.org/10.5194/egusphere-egu26-14447

Palucha, N., Quataert, K., Vlaeminck, E., Schröder, E., De Winter, K. & Soetaert, W. (2025). High-throughput screening of acetogenic strains for growth and metabolite profiles on readily available biomass. Bioresource Technology, 419, Article 132026. https://doi.org/10.1016/j.biortech.2024.132026

Palucha, N., Fojt, J., Holátko, J., Hammerschmiedt, T., Kintl, A., Brtnický, M., Řezáčová, V., De Winterb, K., Uitterhaegen, E. & Kučerík, J. (2024). Does poly-3-hydroxybutyrate biodegradation affect the quality of soil organic matter? Chemosphere, 352, Article 141300. https://doi.org/10.1016/j.chemosphere.2024.141300

Palucha, N., Vlaeminck, E., Uitterhaegen, E., Quataert, K., De Winter, K. & Soetaert, W. (2026). Acetogens beyond gas fermentation: Enhancing bioconversion of lignocellulosic biomass. Biotechnology Advances, 89, Article 108868. https://doi.org/10.1016/j.biotechadv.2026.108868

Berretta, A. & Schwab, C. (2025). Fermentation-driven interactions of gut microbes with their environment. Essays in Biochemistry, 69(6), 1-12. https://doi.org/10.1042/EBC20253057

García Martínez, J. B., Behr, J., Andrade, T. A., Blouin, S., Costa, J. & Denkenberger, D. (2026). Global potential of integrated biorefineries for leaf protein and sugar: Producing sustainable food and preventing starvation in catastrophes. Sustainable Production and Consumption, 64, 247-265. https://doi.org/10.1016/j.spc.2026.02.009

Lopez-Rodulfo, I. M., Rasmussen, M. K., Hamaker, B. & M.Martinez, M. (2026). Selective detoxification of digesta revealed how cold-pressed apple fractions modulate transepithelial glucose transport and stimulate GLP-1 secretion. Food Chemistry, 509, Article 148588. https://doi.org/10.1016/j.foodchem.2026.148588

Tvilum, M. S., Nielsen, C. B., Steensgaard, I., Poulsen, T. B., Johannsen, M. & Tørring, T. (2026). Hypoxia-induced production of the cyclolipodepsipeptide BE-43547 by Micromonospora sp. RV43. Microbiology, 172(2), Article 001662. https://doi.org/10.1099/mic.0.001662

Aagaard, J. B., Gandini, R., Ballegaard, A.-S. R., Krogstrup Jensen, B., Dorn, B., Verner, A., Lenstrup, A., Sønderholm, M., Miehe, M., Pfützner, W., Jakob, T., Andersen, G. R., Möbs, C. & Spillner, E. (2026). Nanobody-based IgG simultaneously inhibit the allergenic and enzymatic activity of the dominant honeybee venom allergen. Nature Communications, 17(1), Article 1814. https://doi.org/10.1038/s41467-026-69572-0

Palacios, P. A. & Kofoed, M. V. W. (2026). Demonstration of H₂/CO₂ acetogenesis by Acetobacterium wieringae in a trickle-bed reactor without organic substrates. Chemical Engineering Journal Advances, 25, Article 101029. https://doi.org/10.1016/j.ceja.2025.101029

Huertas-Díaz, L., Hosek, J., Gram-Hansen, D., Frei, R., Roduit, C., Sasaki, M., Lauener, R. P., Schwab, C. & C. K.-CARE Study Group (2026). pH-Dependent Effects of Short-chain Carboxylic Acids and Buffer Systems On Clostridioides difficile in Vitro and in Vivo. Microbial Ecology, 89(1), 45. Article 45. https://doi.org/10.1007/s00248-026-02694-6

Ambye-Jensen, M. & Moirangthem, K. (2025). Pretreatment of Biomass: Structural Modification, Preparation, and Fractionation of Biomass for Further Conversion. In Bioprocesses: A Comprehensive Guide to Sustainable Resources in the Non-Fossil Era (pp. 265-294). Cambridge University Press. https://doi.org/10.1017/9781108950831.008

Khider, M. L. K., Irla, M., López, M. G., Gispert, A., Konjetzko, T., Meliawati, M., Schmid, J., Brautaset, T. & Brito, L. F. (2026). CRISPR-Cas9-driven genome editing in Bacillus methanolicus MGA3. Frontiers in Microbiology, 16, Article 1728984. https://doi.org/10.3389/fmicb.2025.1728984

Dai, R., Zhou, B., Zeng, J., Qian, P., Sun, Y., Zhou, Y. & Guo, Z. (2026). Boosting catalytic dye degradation in Fe₂O₃ nanozyme through Cu-doping mediated phase transformation. Journal of Environmental Chemical Engineering, 14(1), Article 120625. https://doi.org/10.1016/j.jece.2025.120625

Zhang, N., Bittner, J. P., Pfleger, A., Domínguez de María, P., Jakobtorweihen, S., Smirnova, I. & Kara, S. (2026). Deciphering alcohol dehydrogenase catalysis in glycerol-based deep eutectic solvents through experimental and computational insights. Reaction Chemistry and Engineering, 11(4), 874-887. https://doi.org/10.1039/d5re00448a

Lara, A. R., López-Pérez, M. & Fernández, F. J. (2025). Reprogramming microbial cells to improve the production of biopharmaceuticals and fine chemicals. In Whole Cell Biocatalysis: Fundamentals and Applications (pp. 21-64). Elsevier. https://doi.org/10.1016/B978-0-443-23998-4.00002-6

Romio, C., Kofoed, M. V. W. & Møller, H. B. (2026). Alkaline treatment with KOH for enhanced biogas recovery from agricultural feedstock and digested residues. Biomass and Bioenergy, 209, Article 108913. https://doi.org/10.1016/j.biombioe.2025.108913

Meyer, J., Meyer, L. E., Borg, H., Dorfs, D. & Kara, S. (2025). Functionalized poly(aspartic acid) hydrogel particles as carriers for covalent enzyme immobilization. RSC Sustainability, 3(8), 3554-3566. https://doi.org/10.1039/d5su00280j

Qiu, J., Bibi, A., Lara, A. R., Wang, Q. & Dai, Z. (2026). Biosensors for coenzyme A thioester derivatives: Development, optimization and applications. Biotechnology Advances, 87, Article 108767. https://doi.org/10.1016/j.biotechadv.2025.108767

Engelbrecht, N., Ambrose, H. W., Sieborg, M. U. & Kofoed, M. V. W. (2026). Heat integration aspects of exothermic biomethanation: A pilot reactor with shell-and-tube heat exchange capability. Energy Conversion and Management, 353, Article 121168. https://doi.org/10.1016/j.enconman.2026.121168

Wang, F., Vig Benfeldt, F., Khazaee, Z., Nygaard Nielsen, M. L., Marks, M. J., Ouyang, Y., Lock, N., Gao, R., Guo, Z. & Eser, B. E. (2026). Metal–Organic Framework Encapsulation of Ferulic Acid Decarboxylase: Robust Biocomposites Catalyzing Synthetically Useful Decarboxylation and Synergized CO₂Fixation Reactions. ACS Sustainable Chemistry and Engineering, 14(4), 1884-1898. https://doi.org/10.1021/acssuschemeng.5c09355

Nissen, S. H., Juul, L., Juel, N., Larsson, K., Nebel, C., Bruhn, A., Ambye-Jensen, M., Undeland, I. & Dalsgaard, T. K. (2026). Oxidative stability of protein concentrates from the green seaweed Ulva spp. Algal Research, 94, Article 104570. https://doi.org/10.1016/j.algal.2026.104570

Rosati, B., Skønager, J. T., Bektassov, M., Teng, Z., Glasius, M., Barbato, M., Bilde, M., Kristensen, K. V. & Tesson, S. V. M. (2026). Aerosolisation of microalgae: unveiling dimethyl-sulfide emissions during bubbling. npj Climate and Atmospheric Science, 9(1), Article 32. https://doi.org/10.1038/s41612-025-01305-4

Irla, M., Brito, L. F., Langlo, J., Wohlers, C., Benninghaus, L., Heid, C., Wendisch, V. F., Schmid, J. & Brautaset, T. (2026). Development of a markerless tool for targeted chromosome modification in the thermophilic and methylotrophic bacterium Bacillus methanolicus. Microbial Cell Factories, 25(1), Article 10. https://doi.org/10.1186/s12934-025-02880-0

Kromm, F. E. H., Møller, S. L. B., Jensen, A. S., Wørmer, G. J., Rasmussen, M. H., B. Svenningsen, E., Tørring, T. & Poulsen, T. B. (2026). Modular Total Synthesis of Lasalocid Acid A through Direct C(sp³)–C(sp³) Attached Ring Construction. Journal of the American Chemical Society, 148(1), 249-257. https://doi.org/10.1021/jacs.5c11543

Fang, F., Franco, M., Gallego-Lobillo, P., Spotti, M. J., Bechtner, J. D. & Martinez, M. M. (2026). Interactive effects of free and cell wall-bound polyphenols on starch pasting, retrogradation, gelation and digestibility. Food Hydrocolloids, 175, Article 112457. https://doi.org/10.1016/j.foodhyd.2026.112457

Franco, M., Lopez-Rodulfo, I. M., Bianchi, F., Gomez, M. & Martinez, M. M. (2026). Harnessing apple pomace as a bioactive bread ingredient: Influence of exogenous soluble polysaccharides on water dynamics and structure-dependent polyphenol stability. Food Hydrocolloids, 175, Article 112444. https://doi.org/10.1016/j.foodhyd.2026.112444

Ma, Y. & Eser, B. E. (2025). Bridging Disciplines in Enzyme Kinetics: Understanding Steady-State, Transient-State and Performance Parameters. Catalysts, 15(12), Article 1139. https://doi.org/10.3390/catal15121139

Mota, L. A., Calegari, R. P., Pinto, A. U., Sica, P., Gomes, M. P., Baptista, A. S. & Arthur, V. (2026). Biofortification of Yeast with Selenomethionine in Corn Hydrolysate: Influence of Different Metabolic Pathways. Biological Trace Element Research, 204(6), 4251-4268. https://doi.org/10.1007/s12011-025-04963-w

Lucas, T. N., Biehain, U., Gautam, A., Gemeinhardt, K., Lass, T., Konzalla, S., Ley, R. E., Angenent, L. T. & Huson, D. H. (2026). MMonitor for real-time monitoring of microbial communities using long reads. Cell Reports Methods, 6(1), Article 101266. https://doi.org/10.1016/j.crmeth.2025.101266

Vaupel, S., Meyer, L. E., Domínguez de María, P. & Kara, S. (2025). Molar-Scale Phenolic Acid Decarboxylation Using Thermostable Biocatalysts and Enzyme-Compatible Deep Eutectic Solvents. ChemSusChem, 18(24), Article e202501755. https://doi.org/10.1002/cssc.202501755

Ko, G., Park, H., Lee, C. Y., Angenent, L. T., Jeon, B. S. & Hwang, E. T. (2026). Biomineralization-driven one-pot separation and stabilization of extracellular lipases bypassing purification. International Journal of Biological Macromolecules, 337(Part 2), Article 149554. https://doi.org/10.1016/j.ijbiomac.2025.149554

Behan, J. A., Barrière, F., Geneste, F., Bodin, C., Vautier, A., Guihéneuf, S., Colavita, P. E., Philips, J., Reiner, J. E., Tschulkow, M. & Nimmegeers, P. (2025). Challenges and opportunities for the production of sustainable active species for redox flow batteries in bioelectrochemical systems. Chemical Engineering Journal, 524, Article 169515. https://doi.org/10.1016/j.cej.2025.169515

Palacios Jaramillo, P. A. & Kofoed, M. V. W. (2026). Performance of mesophilic and thermophilic acetogenic strains for CO2 -to-acetate production. Biomass and Bioenergy, 207, Article 108599. https://doi.org/10.1016/j.biombioe.2025.108599

Calegari, R. P., Schutgens, M., Ottosen, L. D. M. & Kofoed, M. V. W. (2025). Selenium and Cysteine Synergy: Enhancing methane production rates in hyperthermophilic methanogens. 1604. Abstract from FEMS MICRO 2025, Milan, Italy.

Ahmmed, M. S., Otten, C. K., Kofoed, M. V. W. & Batstone, D. J. (2025). Impact of rheology on mass transfer and bubble diameter in wastewater treatment systems. Chemical Engineering Research and Design, 224, 523-532. https://doi.org/10.1016/j.cherd.2025.11.039

Ballegaard, A. S. R., Jensen, B. K., Aagaard, J. B., Miehe, M. & Spillner, E. (2026). Molecular targeting in the context of insect venom allergy: targets and perspectives. Allergo Journal International, 35(1), 8-14. https://doi.org/10.1007/s40629-025-00355-7

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