Publications by Medical Biotechnology

Are you looking for publications by Section of Medical Biotechnology? On this page you can find all the publications made by the Section of Medical Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Nygaard, J. V. (2013). Combining Imaging Modalities in the Modelling of Multi Parameter Devices. In ASME 2013 Conference on Frontiers in Medical Devices: Applications of Computer Modeling and Simulation (FMD2013) (Vol. 2013). Article FMD2013-16124 American Society of Mechanical Engineers. https://doi.org/10.1115/FMD2013-16124

Nygaard, J. V. (2013). Combining imaging modalities in the modeling of multiparameter devices. Journal of Medical Devices, Transactions of the ASME, 7(4). https://doi.org/10.1115/1.4025846

Coudrillier, B., Pijanka, J., Jefferys, J., Sorensen, T., Quigley, H. A., Boote, C. & Nguyen, T. D. (2015). Collagen structure and mechanical properties of the human sclera: analysis for the effects of age. Journal of Biomechanical Engineering, 137(4), 041006. https://doi.org/10.1115/1.4029430

Kamma-Lorger, C. S., Boote, C., Hayes, S., Moger, J., Burghammer, M., Knupp, C., Quantock, A. J., Sorensen, T., Di Cola, E., White, N., Young, R. D. & Meek, K. M. (2010). Collagen and mature elastic fibre organisation as a function of depth in the human cornea and limbus. Journal of Structural Biology, 169(3), 424-30. https://doi.org/10.1016/j.jsb.2009.11.004

Sun, D., Zhang, Z., Chen, M., Zhang, Y., Amagat, J., Kang, S., Zheng, Y., Hu, B. & Chen, M. (2020). Co-immobilization of Ce6 Sono/photosensitizer and Protonated Graphitic-Carbon Nitride on PCL/gelation Fibrous Scaffolds For Combined Sono-photodynamic Cancer Therapy. ACS applied materials & interfaces, 12(36), 40728-40739. https://doi.org/10.1021/acsami.0c08446

Tian, L., Prabhakaran, M., Hu, J., Chen, M., Besenbacher, F. & Ramakrishnaa , S. (2015). Coaxial electrospun poly(lactic acid)/silk fibroin nanofibers incorporated with nerve growth factor support the differentiation of neuronal stem cells. R S C Advances, 5, 49838-49848. https://doi.org/10.1039/C5RA05773F

Cámpora, J., López, J. A., Palma, P., Spillner, E., Carmona, E. & Valerga, P. (1999). Cleavage of palladium metallacycles by acids: A probe for the study of the cyclometalation reaction. Angewandte Chemie International Edition, 38(1-2), 147-151.

Chen, M., Gao, S., Dong, M., Song, J., Yang, C., Howard, K. A., Kjems, J. & Besenbacher, F. (2012). Chitosan/siRNA nanoparticles encapsulated in PLGA nanofibers for siRNA delivery. A C S Nano, 6(6), 4835-4844. https://doi.org/10.1021/nn300106t

Noor, M. A., Nygaard, J. V., Hasenkam, J. M. & Johansen, P. (2019). Characterization of The Regional Loss and Storage Moduli in Different Segments of The Thoracic Aorta. Abstract from 37th Annual Meeting. Danish Society for Biomedical Engineering., København, Denmark.

Russkamp, D., Van Vaerenbergh, M., Etzold, S., Eberlein, B., Darsow, U., Schiener, M., De Smet, L., Absmaier, M., Biedermann, T., Spillner, E., Ollert, M., Jakob, T., Schmidt-Weber, C. B., de Graaf, D. C. & Blank, S. (2018). Characterization of the honeybee venom proteins C1q-like protein and PVF1 and their allergenic potential. Toxicon, 150, 198-206. https://doi.org/10.1016/j.toxicon.2018.05.017

Nygaard, J. V. & Pyrz, R. (2003). Characterisation of Microcellular Foams using X-Ray Microtomography and Raman Spectroscopy. Cellular Polymers, 22(6), 347-369.

Nygaard, J. V., Uyar, T., Chen, M., Cloetens, P., Kingshott, P. & Besenbacher, F. (2011). Characterisation of internal morphologies in electrospun fibers by X-ray tomographic microscopy. Nanoscale, 3. https://doi.org/10.1039/c1nr10304k

Pijanka, J. K., Kimball, E. C., Pease, M. E., Abass, A., Sorensen, T., Nguyen, T. D., Quigley, H. A. & Boote, C. (2014). Changes in scleral collagen organization in murine chronic experimental glaucoma. Investigative Ophthalmology & Visual Science, 55(10), 6554-64. https://doi.org/10.1167/iovs.14-15047

Boote, C., Palko, J. R., Sorensen, T., Mohammadvali, A., Elsheikh, A., Komáromy, A. M., Pan, X. & Liu, J. (2016). Changes in posterior scleral collagen microstructure in canine eyes with an ADAMTS10 mutation. Molecular Vision, 22, 503-17.

Nygaard, J. V. (2012). CFD i fysiokemisk hydrodynamik - transport og reaktionsstrømning.

Nygaard, J. V. (2012). CFD - flow induced structural vibrations.

Munir, S., Koch, T. G., Foldager, C. B., Le, D. Q. S., Nygaard, J. V., Søballe, K. & Ulrich-Vinther, M. (2010). Cartilage constructs from human cord blood stem cells seeded in structurally-graded polycaprolactone scaffolds. Poster session presented at Nordic Orthopaedic Federation Congress.

Samuel, S. A. & Nygaard, J. V. (2008). Carotid Plaque Stresses. In G. Petrone & G. Cammarata (Eds.), Modelling and Simulation (1. ed. ed., pp. 167-184). I-Tech Education and Publishing.

Niemann, A. K., Udesen, J., Thrysøe, S. A., Nygaard, J. V., Fründ, E.-T. W., Petersen, S. E. & Hasenkam, J. M. (2010). Can sites prone to flow induced vascular complications in a-v fistulas be assessed using computational fluid dynamics? Journal of Biomechanics, 43(10), 2002-9. https://doi.org/10.1016/j.jbiomech.2010.02.037

Müller, C. A., Jørgensen, M. L. & Chen, M. (2020). Can Filtration Technology Advance Culture of Circulating Tumor Cells towards Precision Medicine? Archives of Cancer Biology and Therapy, 1(3). https://www.scientificarchives.com/article/can-filtration-technology-advance-culture-of-circulating-tumor-cells-towards-precision-medicine

Mazzorana, M. & Sørensen, T. L. M. (2019). Calcium-Induced Protein Folding in Calumenin and Calmodulin. In C. Heizmann (Ed.), Calcium-Binding Proteins of the EF-Hand Superfamily (Vol. 1929, pp. 517-537). Humana Press. https://doi.org/10.1007/978-1-4939-9030-6_32

Mazzorana, M., Hussain, R. & Sorensen, T. (2016). Ca-Dependent Folding of Human Calumenin. PLOS ONE, 11(3), e0151547. Article e0151547. https://doi.org/10.1371/journal.pone.0151547

Picard, M., Jensen, A.-M. L., Sørensen, T. L.-M., Champeil, P., Møller, J. V. & Nissen, P. (2007). Ca(2+) versus Mg(2+) Coordination at the Nucleotide-binding site of the Sarcoplasmic Reticulum Ca(2+)-ATPase. Journal of Molecular Biology, 368(1), 1-7.

Greunke, K., Spillner, E., Braren, I., Seismann, H., Kainz, S., Hahn, U., Grunwald, T. & Bredehorst, R. (2006). Bivalent monoclonal IgY antibody formats by conversion of recombinant antibody fragments. Journal of Biotechnology, 124(2), 446-56. https://doi.org/10.1016/j.jbiotec.2005.12.032

Lauritsen, S. H., Bertelsen, L. B., Daugård, P., Laustsen, C., Nielsen, N., Nygaard, J. V. & Stødkilde-Jørgensen, H. (2015). Bioreactor for quantification of cell metabolism by MR-hyperpolarization. Biomedical Physics & Engineering Express, 1(4). https://doi.org/10.1088/2057-1976/1/4/047003

Müller, C. A., Li, P., Wang, Y., Dong, MD., Tian, B. & Chen, M. (2023). Bionic Opto-responsive Fiber for Directing Neurite Growth. Materials Today Nano, 22, Article 100311. https://doi.org/10.1016/j.mtnano.2023.100311

Friis, S. J., Hansen, T. S., Poulsen, M., Gregersen, H., Brüel, A. & Vinge Nygaard, J. (2023). Biomechanical properties of the stomach: A comprehensive comparative analysis of human and porcine gastric tissue. Journal of the Mechanical Behavior of Biomedical Materials, 138, Article 105614. https://doi.org/10.1016/j.jmbbm.2022.105614

Islamagic, L., Tjørnild, M. J., Carlson Hanse, L., Nygaard, J. V. & Hasenkam, J. M. (2019). Biomechanical properties of porcine small intestinal submucosa matrix compared with porcine mitral valve leaflets. Poster session presented at 29th Annual Meeting SSRCTS, Geilo, Norway.

Salvig, C. D., Benhassen, L. L., Nygaard, J. V., Johansen, P., Skov, S. N. & Hasenkam, J. M. (2018). Biomechanical in vitro assessment of the porcine aortic root. Poster session presented at 28th Annual Meeting, Scandinavian Society for Research in Cardiothoracic Surgery, Geilo, Norway.

Islamagič, L., Tjørnild, M. J., Carlson Hanse, L., Nygaard, J. V. & Hasenkam, J. M. (2023). Biomechanical comparison of porcine mitral leaflets with porcine small intestinal submucosa extracellular matrix. Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine, 237(4), 435 - 442. https://doi.org/10.1177/09544119231158248

Noor, M. A., Nygaard, J. V., Hasenkam, J. M. & Johansen, P. (2019). Biomechanical characterization of the regional loss and storage moduli of the thoracic aorta. Abstract from 29th Annual Meeting SSRCTS, Geilo, Norway.

Chen, Y., Taskin, M. B., Zhang, Z., Su, Y., Han, X. & Chen, M. (2019). Bioadhesive anisotropic nanogrooved microfibers directing three-dimensional neurite extension. Biomaterials Science, 7, 2165-2173. https://doi.org/10.1039/c8bm01603h

Jakob, T., Blank, S. & Spillner, E. (2017). Benefits and limitations of recombinant allergens in diagnostics of insect venom allergy. In J. Kleine-Tebbe & T. Jakob (Eds.), Molecular Allergy Diagnostics: Innovation for a Better Patient Management (pp. 341-362). Springer. https://doi.org/10.1007/978-3-319-42499-6_18

Olesen, L. Ø., Bouzinova, E., Severino, M., Sivasaravanaparan, M., Hasselstrøm, J. B., Finsen, B. & Wiborg, O. (2016). Behavioural Phenotyping of APPswe/PS1δE9 Mice: Age-Rrelated Changes and Effect of Long-Term Paroxetine Treatment. PLOS ONE, 11(11), Article e0165144.

Balzer, L., Pennino, D., Blank, S., Seismann, H., Darsow, U., Schnedler, M., McIntyre, M., Ollert, M., Durham, S. R., Spillner, E., Ring, J. & Cifuentes, L. (2014). Basophil activation test using recombinant allergens: highly specific diagnostic method complementing routine tests in wasp venom allergy. P L o S One, 9(10), e108619. https://doi.org/10.1371/journal.pone.0108619

Stenderup, K., Kjeldsen, C. R., Shanebeck, K., Brady, W., Van Brunt, MP., King, G., Marelli, M., Slagle, P., Xu, H., Nairn, NW., Johnson, J., Wang, AA., Li, G., Thornton, KC., Dam, T. N. & Grabstein, KH. (2015). AZ17: a new bispecific drug targeting IL-6 and IL-23 with potential clinical use-improves psoriasis in a human xenograft transplantation model. Protein Engineering Design and Selection (Print), 28/10, 467-480. Article 26271488. https://doi.org/10.1093/protein/gzv034

Spillner, E., Greunke, K., Seismann, H., Blank, S., Braren, I. & du Plessis, D. (2012). Avian IgY antibodies and their recombinant equivalents in research, diagnostics and therapy. Biologicals, 40(5), 313-322. https://doi.org/10.1016/j.biologicals.2012.05.003

Bogojevic, O., Zhang, Y., Daugaard Wolff, C., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). A sustainable and regioselective synthesis of Hemi-bis(monoacylglycero)phosphates and bis(diacylglycero)phosphates. iScience, 26(7), Article 107075. https://doi.org/10.1016/j.isci.2023.107075

Prabakaran, T., Troldborg, A., Kumpunya, S., Alee, I., Marinković, E., Windross, S. J., Nandakumar, R., Narita, R., Zhang, B.-C., Carstensen, M., Vejvisithsakul, P., Marqvorsen, M. H. S., Iversen, M. B., Holm, C. K., Østergaard, L. J., Pedersen, F. S., Pisitkun, T., Behrendt, R., Pisitkun, P. & Paludan, S. R. (2021). A STING antagonist modulating the interaction with STIM1 blocks ER-to-Golgi trafficking and inhibits lupus pathology. EBioMedicine, 66, Article 103314. https://doi.org/10.1016/j.ebiom.2021.103314

Niemann, A., Samuel, S. A., Fründ, E.-T. W., Nygaard, J. V., Petersen, S. E. & Hasenkam, J. M. (2008). Assessment of Hemodynamic Conditions in A-V Shunts using CFD. Poster session presented at PhD Day, University of Aarhus, Århus, Denmark.

Cheng, W., Xu, R., Li, D., Bortolini, C., He, J., Dong, MD., Besenbacher, F., Huang, Y. & Chen, M. (2016). Artificial extracellular matrix delivers TGFb1 regulating myofibroblast differentiation. RSC Advances, 6(26), 21922-21928. https://doi.org/10.1039/c5ra26164c

Nygaard, J. V. & Rytter, J. (1999). A reinforced, flexible conduit and a method of manufacturing same.

Rasmussen, M. R., Marqvorsen, M. H. S., Kristensen, S. K. & Jensen, H. H. (2014). A Protocol for Metal Triflate Catalyzed Direct Glycosylations with GalNAc 1-OPiv Donors. Journal of Organic Chemistry, 79(22), 11011-11019. https://doi.org/10.1021/jo502036f

Nygaard, J. V., Skov, A. L. & Gross-Petersen, J. (2017). A project on innovation pipeline concepts. Abstract from Danish Hydrocarbon Research and Technology Centre Technology Conference 2017, Kolding, Denmark. http://www.oilgas.dtu.dk/-/media/Andre_Universitetsenheder/Oilgas_ny/Tech-conf/Tech-conf-17/DHRTC-Presentation-abstracts.ashx?la=da&hash=BE99E3BA882D5E80D55CFC91ADCA5BCEF493D9E5

Kamp, S., Jemec, G. B. E., Kemp, K., Kjeldsen, C. R., Stenderup, K., Pakkenberg, B. & Dam, T. N. (2009). Application of stereology to dermatological research. Experimental Dermatology, 18(12), 1001-9. https://doi.org/10.1111/j.1600-0625.2009.00947.x

Schiener, M., Eberlein, B., Moreno Aguilar, C., Pietsch, G., Serrano, P., McIntyre, M., Schwarze, L., Russkamp, D., Biedermann, T., Spillner, E., Darsow, U., Ollert, M., Schmidt-Weber, C. & Blank, S. (2017). Application of recombinant antigen 5 allergens from seven allergy-relevant Hymenoptera species in diagnostics. Allergy: European Journal of Allergy and Clinical Immunology, 72(1), 98-108. https://doi.org/10.1111/all.13000

Aller, P., Sanchez-Weatherby, J., Foadi, J., Winter, G., Lobley, C. M. C., Axford, D., Ashton, A. W., Bellini, D., Brandao-Neto, J., Culurgioni, S., Douangamath, A., Duman, R., Evans, G., Fisher, S., Flaig, R., Hall, D. R., Lukacik, P., Mazzorana, M., McAuley, K. E. ... Walsh, M. A. (2015). Application of in situ diffraction in high-throughput structure determination platforms. Methods in molecular biology (Clifton, N.J.), 1261, 233-53. https://doi.org/10.1007/978-1-4939-2230-7_13

Xu, R., Taskin, M. B., Dagnæs-Hansen, F., Meyer, T., Bach, L. W., Axelsen, S. M., Besenbacher, F. & Chen, M. (2015). Application of a Novel 3D Biofunctional Scaffold for hiPS-MSC Fibrogenesis. Abstract from 2015 4th TERMIS World Congress , Boston, United States. http://online.liebertpub.com/toc/tea/21/S1

Blank, S., Seismann, H., Michel, Y., McIntyre, M., Cifuentes, L., Braren, I., Grunwald, T., Darsow, U., Ring, J., Bredehorst, R., Ollert, M. & Spillner, E. (2011). Api m 10, a genuine A. mellifera venom allergen, is clinically relevant but underrepresented in therapeutic extracts. Allergy: European Journal of Allergy and Clinical Immunology, 66(10), 1322-1329. https://doi.org/10.1111/j.1398-9995.2011.02667.x

Morgan, S. R., Dooley, E. P., Hocking, P. M., Inglehearn, C. F., Ali, M., Sorensen, T. L.-M., Meek, K. M. & Boote, C. (2013). An x-ray scattering study into the structural basis of corneal refractive function in an avian model. Biophysical Journal, 104(12), 2586-94. https://doi.org/10.1016/j.bpj.2013.04.053

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Revised 21.11.2022

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