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Department of Biological and Chemical Engineering

Publications by Medical Biotechnology

Are you looking for publications by Section of Medical Biotechnology? On this page you can find all the publications made by the Section of Medical Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Shi, T., Liu, Y., Wang, D., Xia, D., Li, B., Xu, R., Li, N., Liang, C. & Chen, M. (2024). Spatially engineering tri-layer nanofiber dressings featuring asymmetric wettability for wound healing. Nano Materials Science, 6(5), 611-624. https://doi.org/10.1016/j.nanoms.2024.01.008

Prakash, P. G., Kumar, N., Gurumurthy, R. K. & Chumduri, C. (2024). Temporal single-cell RNA sequencing dataset of gastroesophagus development from embryonic to post-natal stages. Scientific Data, 11(1), Article 1238. https://doi.org/10.1038/s41597-024-04081-7

Li, Z., Kovács, P., Friec, A. L., Jensen, B. N., Nygaard, J. V. & Chen, M. (2024). Mechanical memory based biofabrication of hierarchical elastic cardiac tissue. Biofabrication, 17(1). https://doi.org/10.1088/1758-5090/ad89fd

Zhang, W., Wang, J., Chen, M. & Dong, M. (2024). Sustainable synthesis: Unlocking potential with plasma-assisted conversion. Matter, 7(8), 2764-2765. https://doi.org/10.1016/j.matt.2024.06.033

Sarikhani, E., Meganathan, D. P., Larsen, A. K. K., Rahmani, K., Tsai, C. T., Lu, C. H., Marquez-Serrano, A., Sadr, L., Li, X., Dong, M., Santoro, F., Cui, B., Klausen, L. H. & Jahed, Z. (2024). Engineering the Cellular Microenvironment: Integrating Three-Dimensional Nontopographical and Two-Dimensional Biochemical Cues for Precise Control of Cellular Behavior. ACS Nano, 18(29), 19064-19076. https://doi.org/10.1021/acsnano.4c03743

Chumduri, C., Kumar Gurumurthy, R., Berger, H., Koster, S., Brinkmann, V., Klemm, U., Mollenkopf, H.-J., Herbst, H., Mangler, M. & Meyer, T. F. (2018). Transition of Wnt signaling microenvironment delineates the squamo-columnar junction and emergence of squamous metaplasia of the cervix. https://doi.org/10.1101/443770

Wang, J., Zhang, W., Wu, T., Chen, M. & Dong, M. (2024). Occurrence of giant plasma bubble in liquid. Matter, 7(9), 3024-3035. https://doi.org/10.1016/j.matt.2024.04.032

Kumar, N., Prakash, P. G., Wentland, C., Kurian, S. M., Jethva, G., Brinkmann, V., Mollenkopf, H. J., Krammer, T., Toussaint, C., Saliba, A. E., Biebl, M., Jürgensen, C., Wiedenmann, B., Meyer, T. F., Gurumurthy, R. K. & Chumduri, C. (2024). Decoding spatiotemporal transcriptional dynamics and epithelial fibroblast crosstalk during gastroesophageal junction development through single cell analysis. Nature Communications, 15(1), Article 3064. https://doi.org/10.1038/s41467-024-47173-z

Toftdal, M. S., Christensen, N. P., Kadumudi, F. B., Dolatshahi-Pirouz, A., Grunnet, L. G. & Chen, M. (2024). Mechanically reinforced hydrogel vehicle delivering angiogenic factor for beta cell therapy. Journal of Colloid and Interface Science, 667, 54-63. https://doi.org/10.1016/j.jcis.2024.04.050

Anand, S., Müller, C. A., Nørrehvedde Jensen, B. & Chen, M. (2024). Embracing Remote Fields as the Fourth Dimension of Tissue Biofabrication. Advanced Functional Materials, 34(32), Article 2401654. https://doi.org/10.1002/adfm.202401654

Toftdal, M. S., Grunnet, L. G. & Chen, M. (2024). Emerging Strategies for Beta Cell Encapsulation for Type 1 Diabetes Therapy. Advanced Healthcare Materials, 13(19), Article 2400185. https://doi.org/10.1002/adhm.202400185

van der Horst, D., Kurmasheva, N., Marqvorsen, M. H. S., Assil, S., Rahimic, A. H. F., Kollmann, C. F., Silva da Costa, L., Wu, Q., Zhao, J., Cesari, E., Iversen, M. B., Ren, F., Jensen, T. I., Narita, R., Schack, V. R., Zhang, B.-C., Bak, R. O., Sette, C., Fenton, R. A. ... Olagnier, D. (2024). SAM68 directs STING signaling to apoptosis in macrophages. Communications Biology, 7, 283. Article 283. https://doi.org/10.1038/s42003-024-05969-1

Su, Y., Zhang, Y., Chen, Y., Majidi, S. S., Dong, M. & Chen, M. (2024). Surface recrystallization on melt electrowritten scaffolds for acceleration of osteogenic differentiation. Materials Today Physics, 41, Article 101344. https://doi.org/10.1016/j.mtphys.2024.101344

Juul-Madsen, K., Parbo, P., Ismail, R., Ovesen, P. L., Schmidt, V., Madsen, L. S., Thyrsted, J., Gierl, S., Breum, M., Larsen, A., Andersen, M. N., Romero-Ramos, M., Holm, C. K., Andersen, G. R., Zhao, H., Schuck, P., Nygaard, J. V., Sutherland, D. S., Eskildsen, S. F. ... Vorup-Jensen, T. (2024). Amyloid-β aggregates activate peripheral monocytes in mild cognitive impairment. Nature Communications, 15(1), Article 1224. https://doi.org/10.1038/s41467-024-45627-y

Cao, W., Xia, D., Zhou, L., Liu, Y., Wang, D., Liang, C. & Chen, M. (2024). Antibacterial and antioxidant wound dressings with pH responsive release properties accelerate chronic wound healing. Materials Today Physics, 40, Article 101316. https://doi.org/10.1016/j.mtphys.2023.101316

Jensen, B. N. (2024). Anisotropic Biomaterials with Wireless Electromagnetic Stimulation for Guiding Neural Regeneration. Århus Universitet.

Kure Larsen, A.-K. (2024). Investigating Cell Mechanobiology by Extracellular and Intracellular Approaches. Aarhus University.

Meskin, M., Starkey, P. A., Kaspersen, A. E., Ringgaard, S., Sand, S. G., Nygaard, J. V., Jensen, J. A., Traberg, M. S. & Johansen, P. (2024). Investigating the importance of left atrial compliance on fluid dynamics in a novel mock circulatory loop. Scientific Reports, 14(1), 1864. Article 1864. https://doi.org/10.1038/s41598-024-52327-6

Suetta, C., Merhi, Y., Mikkelsen, P. H. & Nygaard, J. V. (2023). Dry electrode integrated with garment. (Patent No. WO2023209148 (A1)). https://dk.espacenet.com/publicationDetails/biblio?DB=EPODOC&II=0&ND=3&adjacent=true&locale=dk_DK&FT=D&date=20231102&CC=WO&NR=2023209148A1&KC=A1#

Aagaard, J. B., Ballegaard, A.-S. R., Andersen, P. O. & Spillner, E. (2023). Molekulares Design von Nanobodies als Werkzeuge in der Allergologie: Diagnostik und mehr. Allergo Journal, 32, 29-40. https://doi.org/10.1007/s15007-023-5829-1

Romani Fernandez, L. G., Spillner, E. & Jakob, T. (2023). Potential and limitations of epitope mapping and molecular targeting in Hymenoptera venom allergy. Frontiers in Allergy, 4, Article 1327391. https://doi.org/10.3389/falgy.2023.1327391

Xu, R., Gao, J., Cao, C., Shi, M., Zhang, Y., Hong, S., Guo, S., Chen, M., Song, P., Fu, G., Li, J., Liang, T., Miao, Y., Tang, L., Yang, J., Li, N. & Dong, M. (2023). HDL mimetics protect Alzheimer's patients carrying APOE ε4 from SARS-CoV-2 invasion. Nano Today, 53, Article 102051. https://doi.org/10.1016/j.nantod.2023.102051

Zhang, Y., Le Friec, A., Zhang, Z., Müller, C. A., Du, T., Dong, M., Liu, Y. & Chen, M. (2023). Electroactive biomaterials synergizing with electrostimulation for cardiac tissue regeneration and function-monitoring. Materials Today, 70, 237-272. https://doi.org/10.1016/j.mattod.2023.09.005

Feng, Y., Cheng, Z., Larsen, A. K. K., Shi, H., Sun, T., Dong, M. & Liu, L. (2023). Amyloid-like nanofibrous network confined and aligned ultrafine bimetallic nanozymes for smart antibacterial therapy. Materials Today Bio, 22, Article 100730. https://doi.org/10.1016/j.mtbio.2023.100730

Dong, J., Holthaus, D., Peters, C., Koster, S., Ehsani, M., Quevedo-Olmos, A., Berger, H., Zarobkiewicz, M., Mangler, M., Kumar Gurumurthy, R., Hedemann, N., Chumduri, C., Kabelitz, D. & Meyer, T. F. (2023). γδ T cell-mediated cytotoxicity against patient-derived healthy and cancer cervical organoids. https://doi.org/10.1101/2023.07.25.550464

Kumar Gurumurthy, R., Kumar, N. & Chumduri, C. (2024). Culturing and Differentiation of Patient-derived Ectocervical Epithelial Stem Cells using Air-Liquid Interphase and Matrigel Scaffold. In M. Baratta (Ed.), Epithelial Cell Culture: methods and protocols (Vol. 2, pp. 109-122). Humana Press.

Koster, S., Kumar Gurumurthy, R., Kumar, N., Ganish Prakash, P., Dhanraj, J., Bayer, S., Berger, H., Kurian, S. M., Drabkina, M., Mollenkopf, H.-J., Goosmann, C., Brinkmann, V., Nagel, Z., Mangler, M., Meyer, T. F. & Chumduri, C. (2022). Modelling Chlamydia and HPV co-infection in patient-derived ectocervix organoids reveals distinct cellular reprogramming. Nature Communications, 13, Article 1030. https://doi.org/10.1038/s41467-022-28569-1

Kumar Gurumurthy, R., Koster, S., Kumar, N., Meyer, T. F. & Chumduri, C. (2022). Patient-derived and mouse endo-ectocervical organoid generation, genetic manipulation and applications to model infection. Nature Protocols (Online), 17, 1658–1690. https://doi.org/10.1038/s41596-022-00695-6

Kumar Gurumurthy, R., Pleissner, K.-P., Chumduri, C., Meyer, T. F. & Mäurer, A. P. (2022). Single object profiles regression analysis (SOPRA): a novel method for analyzing high-content cell-based screens. BMC Bioinformatics , 23, Article 440 (2022. https://doi.org/10.1186/s12859-022-04981-8

Salehirozveh, M., Kure Larsen, A. K., Stojmenovic, M., Thei, F. & Dong, M. (2023). In-situ PLL-g-PEG Functionalized Nanopore for Enhancing Protein Characterization. Chemistry - An Asian Journal, 18(17), Article e202300515. https://doi.org/10.1002/asia.202300515

Abdolmaleki, H., Haugen, A. B., Merhi, Y., Nygaard, J. V. & Agarwala, S. (2023). Inkjet-printed flexible piezoelectric sensor for self-powered biomedical monitoring. Materials Today Electronics, 5, Article 100056. https://doi.org/10.1016/j.mtelec.2023.100056

Pourjafar, M., Saidijam, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2023). Surfaceome Profiling Suggests Potential of Anti-MUC1×EGFR Bispecific Antibody for Breast Cancer Targeted Therapy. Journal of Immunotherapy, 46(7), 245-261. https://doi.org/10.1097/CJI.0000000000000482

Jensen, B. N., Wang, Y., Friec, A. L., Nabavi, S. . M. . S., Dong, MD., Seliktar, D. & Chen, M. (2023). Wireless electromagnetic neural stimulation patch with anisotropic guidance. npj Flexible Electronics, 7(1), Article 34. https://doi.org/10.1038/s41528-023-00270-3

Aagaard, J. B. (2023). Nanobody-based Inhibitors of Allergen-mediated Anaphylaxis. Århus Universitet.

Nasrollahzadeh, F., Spotti, M. J., Skov, K., Mekonen, T., Chen, M. & Martinez, M. M. (2023). Dispersion of low concentration of particulate or fibrillated protein fillers into plant protein melts and their impact on the elasticity and tenderness gap of plant-based foods. Food Hydrocolloids, 144, Article 108985. https://doi.org/10.1016/j.foodhyd.2023.108985

Bogojevic, O., Zhang, Y., Daugaard Wolff, C., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). A sustainable and regioselective synthesis of Hemi-bis(monoacylglycero)phosphates and bis(diacylglycero)phosphates. iScience, 26(7), Article 107075. https://doi.org/10.1016/j.isci.2023.107075

Aagaard, J. B., Ballegaard, A.-S. R., Andersen, P. O. & Spillner, E. (2023). Molecular engineering of nanobodies as tools in allergology: diagnostics and beyond. Allergo Journal International, 32(7), 240-250. https://doi.org/10.1007/s40629-023-00261-w

Liljenhjerte, J., Vudayagiri, S., von Solms, N. & Nygaard, J. V. (2023). Feasibility of periodic stabilizers for extending coiled tubing reach. Geoenergy Science and Engineering, 227, Article 211779. https://doi.org/10.1016/j.geoen.2023.211779

Merhi, Y., Betancur, P. F., Ripolles, T. S., Suetta, C., Brage-Andersen, M. R., Hansen, S. K., Frydenlund, A., Nygaard, J. V., Mikkelsen, P. H., Boix, P. P. & Agarwala, S. (2023). Printed dry electrode for neuromuscular electrical stimulation (NMES) for e-textile. Nanoscale, 15(11), 5337-5344. https://doi.org/10.1039/d2nr06008f

Islamagič, L., Tjørnild, M. J., Carlson Hanse, L., Nygaard, J. V. & Hasenkam, J. M. (2023). Biomechanical comparison of porcine mitral leaflets with porcine small intestinal submucosa extracellular matrix. Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine, 237(4), 435 - 442. https://doi.org/10.1177/09544119231158248

Friis, S. J., Hansen, T. S., Poulsen, M., Gregersen, H., Brüel, A. & Vinge Nygaard, J. (2023). Biomechanical properties of the stomach: A comprehensive comparative analysis of human and porcine gastric tissue. Journal of the Mechanical Behavior of Biomedical Materials, 138, Article 105614. https://doi.org/10.1016/j.jmbbm.2022.105614

Xie, Z., Dionysiou, D. D., Luo, S., Chen, M. & Wei, Z. (2023). Dual-reaction center catalyst based on common metals Cu-Mg-Al for synergistic peroxymonosulfate adsorption-activation in Fenton-like process. Applied Catalysis B: Environmental, 327, Article 122468. https://doi.org/10.1016/j.apcatb.2023.122468

Müller, C. A., Li, P., Wang, Y., Dong, MD., Tian, B. & Chen, M. (2023). Bionic Opto-responsive Fiber for Directing Neurite Growth. Materials Today Nano, 22, Article 100311. https://doi.org/10.1016/j.mtnano.2023.100311

Bogojevic, O., Zhang, Y., Daugaard Wolff, C., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). Phospholipase D-Catalyzed Transphosphatidylation for the Synthesis of Rare Complex Phospholipid Species─Hemi-bis(monoacylglycero)phosphate and Bis(diacylglycero)phosphate. ACS Sustainable Chemistry & Engineering, 11(8), 3506-3516. https://doi.org/10.1021/acssuschemeng.2c07477

Amagat, J., Müller, C. A., Jensen, B. N., Xiong, X., Su, Y., Christensen, N. P., Le Friec, A., Dong, M., Fang, Y. & Chen, M. (2023). Injectable 2D flexible hydrogel sheets for optoelectrical/biochemical dual stimulation of neurons. Biomaterials advances, 146, Article 213284. https://doi.org/10.1016/j.bioadv.2023.213284

zhang, Y., Friec, A. L., Sun, D. & Chen, M. (2023). Sinusoidal Stretchable Fibrous Electrodes Regulate Cardiac Contraction. Chemical Engineering Journal, 455, Article 140555. https://doi.org/10.1016/j.cej.2022.140555

Friis, S. J., Strøm Hansen, T., Poulsen, M., Gregersen, H. & Nygaard, J. V. (2022). Dynamic viscoelastic properties of porcine gastric tissue: Effects of loading frequency, region and direction. Journal of Biomechanics, 143, Article 111302. https://doi.org/10.1016/j.jbiomech.2022.111302

Amagat, J., Su, Y., Svejsø, F. H., Friec, A. L., Sønderskov, S. M., Dong, MD., Fang, Y. & Chen, M. (2022). Self-snapping hydrogel-based electroactive microchannels as nerve guidance conduits. Materials Today Bio, 16, Article 100437. https://doi.org/10.1016/j.mtbio.2022.100437

Laursen, S. H., Hansen, S. G., Taskin, M. B., Chen, M., Wogensen, L., Nygaard, J. V. & Axelsen, S. M. (2023). Electrospun nanofiber mesh with connective tissue growth factor and mesenchymal stem cells for pelvic floor repair: Long-term study. Journal of Biomedical Materials Research. Part B: Applied Biomaterials, 111(2), 392-401. https://doi.org/10.1002/jbm.b.35158

Pourjafar, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2022). Construction, expression and functional characterization of an engineered antibody against tumor antigen MUC-1C. Protein Expression and Purification, 199, Article 106148. https://doi.org/10.1016/j.pep.2022.106148

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