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Department of Biological and Chemical Engineering

Publications

Under publication list you can find a complete list of the publications that are written by employees at the Publications at Department of Biological and Chemical Engineering for example journal articles, books, reports etc.

The department also publishes technical reports which you can read more about under Technical reports.

Under PhD dissertations you will find the department's published PhD dissertations.

Publication list

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Chen, M., Ran, H., Sommer, S. G., Liu, Y., Wang, G. & Zhu, K. (2024). The spatiotemporal heterogeneity of fertosphere hotspots impacted by biochar addition and the implications for NH₃ and N₂O emissions. Chemosphere, 355, Article 141769. https://doi.org/10.1016/j.chemosphere.2024.141769

Jensen, T. B., Saugbjerg, J. R., Henriksen, M. L. & Quinson, J. (2024). Towards the automation of nanoparticle syntheses: The case study of gold nanoparticles obtained at room temperature. Colloids and Surfaces A: Physicochemical and Engineering Aspects, 702(Part 2), Article 135125. https://doi.org/10.1016/j.colsurfa.2024.135125

Hu, Y., Merl, T., Pedersen, J., Bornø, M. L., Tariq, A., Koren, K. & Sommer, S. G. (2024). Tracing N2O from dairy processing sludge amended soil with visualizing microscale heterogeneity of NH3 and pH (Short Communication). Atmospheric Environment: X, 23, Article 100283. https://doi.org/10.1016/j.aeaoa.2024.100283

Schwab, C. & Bambace, M. F. (2024). Traditional and novel applications of sourdough microbes in Northern Europe and the Baltic countries. In Sourdough Microbiota and Starter Cultures for Industry (pp. 93-129). Springer International Publishing. https://doi.org/10.1007/978-3-031-48604-3_4

Li, Q., Ruscheweyh, H. J., Østergaard, L. H., Libertella, M., Simonsen, K. S., Sunagawa, S., Scoma, A. & Schwab, C. (2024). Trait-based study predicts glycerol/diol dehydratases as a key function of the gut microbiota of hindgut-fermenting carnivores. Microbiome, 12, Article 178. https://doi.org/10.1186/s40168-024-01863-4

Lara, A. R., Kunert, F., Vandenbroucke, V., Taymaz-Nikerel, H., Martínez, L. M., Sigala, J. C., Delvigne, F., Gosset, G. & Büchs, J. (2024). Transport-controlled growth decoupling for self-induced protein expression with a glycerol-repressible genetic circuit. Biotechnology and Bioengineering, 121(6), 1789-1802. https://doi.org/10.1002/bit.28697

Hocine, H., Benettayeb, A., Al-Farraj, S., Alkahtane, A. A., Olivier, J. & Sillanpaa, M. (2024). Turbidity Removal from Synthetic Bentonite Suspension Using Opuntia Ficus-Indica (Cactus). International Review of Civil Engineering, 15(1), 12-21. https://doi.org/10.15866/irece.v15i1.23223

Hafner, S. D. (2024). Uncertainty in model predictions of ammonia volatilization from field-applied animal slurry. 89. Abstract from N Workshop, Aarhus, Denmark. https://conferences.au.dk/fileadmin/conferences/2024/nworkshop/Book_of_abstracts_NW2024.pdf

Svenningsen, T. (2024). Uncovering the biosynthesis of the non-canonical lasso peptide Triculamin through in vitro reconstitution. Poster session presented at 4th Synthetic Biology of Natural Products Conference, Cancun, Mexico.

He, Z., Dechesne, A., Schreiber, F., Zhu, Y. G., Larsson, D. G. J. & Smets, B. F. (2024). Understanding Stimulation of Conjugal Gene Transfer by Nonantibiotic Compounds: How Far Are We? Environmental Science & Technology, 58(21), 9017-9030. https://doi.org/10.1021/acs.est.3c06060

Ajmal, S., Kumar, A., Mushtaq, M. A., Tabish, M., Zhao, Y., Zhang, W., Khan, A. S., Saad, A., Yasin, G. & Zhao, W. (2024). Uniting Synergistic Effect of Single-Ni Site and Electric Field of B- Bridged-N for Boosted Electrocatalytic Nitrate Reduction to Ammonia. Small, 20(32), Article 2310082. https://doi.org/10.1002/smll.202310082

Nyangáu, J. O., El Mahdi, J., Møller, H. B. & Sørensen, P. (2024). Unlocking higher methane yields and digestate nitrogen availability in soil through thermal treatment of feedstocks in a two‑step anaerobic digestion. Chemical and Biological Technologies in Agriculture, 11(1), Article 186. https://doi.org/10.1186/s40538-024-00694-7

Sarfraz, R., Priyadarshani, S. V. G. N., Fakhar, A., Khan, M. I., Hassan, Z. U., JooKimae, P. & WonKimabe, G. (2024). Unlocking plant defense: Exploring the nexus of biochar and Ca²⁺ signaling. Plant Stress, 14, Article 100584. https://doi.org/10.1016/j.stress.2024.100584

Naquash, A., Agarwal, N., Nizami, M., Nga, N. N., Aziz, M. & Lee, M. (2024). Unlocking the potential of cryogenic biogas upgrading technologies integrated with bio-LNG production: A comparative assessment. Applied Energy, 371, Article 123720. https://doi.org/10.1016/j.apenergy.2024.123720

Jakobsen, H. S., Brix, J. & Sejer Jakobsen, R. (2024). Unraveling data from an idea management system of 11 radical innovation portfolios: key lessons and avenues for artificial intelligence integration. Journal of Innovation and Entrepreneurship, 13(1), Article 9. https://doi.org/10.1186/s13731-024-00368-6

Pham, T. H., Thomas, R., Schwab, C., Martinez, M. M. & Vidal, N. P. (2024). Unraveling the neutral and polar lipidome of Nordic brown macroalgae: A sustainable source of functional lipids. Food Chemistry, 459, Article 140415. https://doi.org/10.1016/j.foodchem.2024.140415

Gkantzou, E., Koulopoulou, T., Brass, H., Schönauer, D., Glieder, A. & Kara, S. (2024). Unspecific peroxygenase immobilization in 3D-printed microfluidics: towards tailor-made screening platforms. Catalysis Science and Technology, 14(22), 6496-6502. https://doi.org/10.1039/d4cy00869c

Provino, A., Smetana, V., Shtender, V., Siebeneichler, S., Putti, M., Franz, A., Ferdeghini, C., Pecharsky, V. K., Mudring, A. V. & Manfrinetti, P. (2024). Unusual superconductivity in crystallographically disordered RT_2−xSn₂ compounds. Journal of Alloys and Compounds, 1000, Article 175025. https://doi.org/10.1016/j.jallcom.2024.175025

Larsen, C. K., Lindquist, P., Rosenkilde, M., Madsen, A. R., Haselmann, K., Glendorf, T., Olesen, K., Kodal, A. L. B. & Tørring, T. (2024). Using LanM Enzymes to Modify Glucagon-Like Peptides 1 and 2 in E. coli. ChemBioChem, 25(13), Article e202400201. https://doi.org/10.1002/cbic.202400201

Bataee, M., Rajandran, K. V., Soh, M., Ruvalcaba, J. B., Hamdi, Z. & Carter, R. (2024). Utilizing CO2 for Energy Extraction from Geothermal Reservoirs in the Baram Basin, Sarawak Using Numerical Reservoir Simulation Based on Analogue Data. In Society of Petroleum Engineers - SPE Canadian Energy Technology Conference and Exhibition, CET 2024 Society of Petroleum Engineers. https://doi.org/10.2118/218096-MS

Domingo-Félez, C., Jensen, M. M., Bang, A. & Smets, B. F. (2024). Variability and Uncertainty Analysis of N₂O Emissions from WWTP to Improve the Accuracy of Emission Factors and the Design of Monitoring Strategies. ACS ES and T Water, 4(6), 2542-2552. https://doi.org/10.1021/acsestwater.4c00048

Spirito, C. M., Lucas, T. N., Patz, S., Jeon, B. S., Werner, J. J., Trondsen, L. H., Guzman, J. J., Huson, D. H. & Angenent, L. T. (2024). Variability in n-caprylate and n-caproate producing microbiomes in reactors with in-line product extraction. mSystems, 9(8). https://doi.org/10.1128/msystems.00416-24

Christensen, C. S. Q. & Wei, Z. (2024). Waste Derived Biochar Sorbents for Water Treatment of Long- and Short-chain PFAS. 31-31. Abstract from 18th Annual DWF Water Research Conference, Copenhagen, Denmark.

Jacobsen, B. H. & Kai, P., (2024). Weaner pig housing: Summary and analysis: Memorandum prepared as a basis for the revision of the BAT (Best Available Techniques) requirements of the Livestock Approval Order, No. 2024-0708974 (2022-0451019 Danish memorandum), 34 p., Nov 29, 2024. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Sørensen, S. B. & Kristensen, K. V. (2024). What Can We Learn About Classroom Air from Low-cost Sensors? A study on CO2 and Volatile Organic Compounds in Danish Schools. . In Proceedings of Indoor Air 2024 International Society of Indoor Air Quality and Climate.

Lopez Fetzer, D. E., Andrade, T. A. & Ambye-Jensen, M. (2024). Xylose, Glucose and Fructose Extraction from Different Herbaceous Crops in a Green Biorefinery Demonstration Platform: a Comparative Study. Chemical Engineering Transactions, 109, 235-240. https://doi.org/10.3303/CET24109040

Gkantzou, E., Weinhart, M. & Kara, S. (2023). 3D printing for flow biocatalysis. RSC Sustainability, 1(7), 1672-1685. https://doi.org/10.1039/d3su00155e

Meyer, L.-E., Horvath, D., Vaupel, S., Meyer, J., Alcalde, M. & Kara, S. (2023). A 3D printable synthetic hydrogel as an immobilization matrix for continuous synthesis with fungal peroxygenases. Reaction Chemistry & Engineering , 8(5), 984-988. https://doi.org/10.1039/d3re00058c

Su, Q., Huang, S., Zhang, H., Wei, Z. & Ng, H. Y. (2023). Abiotic transformations of sulfamethoxazole by hydroxylamine, nitrite and nitric oxide during wastewater treatment: Kinetics, mechanisms and pH effects. Journal of Hazardous Materials, 444(Part A), Article 130328. https://doi.org/10.1016/j.jhazmat.2022.130328

Kamp, J. N. & Feilberg, A. (2023). Absolute emissions of methane and ammonia from small-scale slurry tank with MMB and inverse dispersion modelling. Abstract from RAMIRAN, Cambridge, United Kingdom.

Schulz, S., Molitor, B. & Angenent, L. T. (2023). Acetate augmentation boosts the ethanol production rate and specificity by Clostridium ljungdahlii during gas fermentation with pure carbon monoxide. Bioresource Technology, 369, Article 128387. https://doi.org/10.1016/j.biortech.2022.128387

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Additives and methods for the mitigation of methane emission from stored liquid manure. Biosystems Engineering, 229, 209-245. https://doi.org/10.1016/j.biosystemseng.2023.03.015

Ajmal, S., Yasin, G., Kumar, A., Tabish, M., Ibraheem, S., Sammed, K. A., Mushtaq, M. A., Saad, A., Mo, Z. & Zhao, W. (2023). A disquisition on CO₂ electroreduction to C₂H₄: An engineering and design perspective looking beyond novel choosy catalyst materials. Coordination Chemistry Reviews, 485, Article 215099. https://doi.org/10.1016/j.ccr.2023.215099

Dalby, F. R., Adamsen, A. P. S., Lashkari, S., Hafner, S. D., Kai, P. & Børsting, C. F. (2023). A farm-scale model for predicting carbon and nitrogen emission and optimizing local farm management. Abstract from Agri Food and Climate Circle 2023, København, Denmark.

Ye, S., Cheng, Y., Guo, Z., Wang, X. & Wei , W. (2023). A Lipid Toolbox of Sugar Alcohol Fatty Acid Monoesters for Single-component Lipid Nanoparticles with Temperature-controlled Release. Colloids and Surfaces B: Biointerfaces, 228, Article 113426. https://doi.org/10.1016/j.colsurfb.2023.113426

Li, Z., Anankanbil, S., Li, L., Lyu, J., Nadzieja, M. & Guo, Z. (2023). Alkylsuccinylated oxidized cellulose-based amphiphiles as a novel multi-purpose ingredient for stabilizing O/W emulsions. Food Hydrocolloids, 134, Article 108014. https://doi.org/10.1016/j.foodhyd.2022.108014

Pedersen, J. & Hafner, S. D. (2023). Ammonia emissions after field application of anaerobically digested animal slurry: Literature review and perspectives. Agriculture, Ecosystems & Environment, 357, Article 108697. https://doi.org/10.1016/j.agee.2023.108697

Pedersen, J. & Hafner, S. D. (2023). Ammonia emissions after field application of anaerobically digested animal slurry: Literature review and perspectives. Abstract from RAMIRAN, Cambridge, United Kingdom.

Valach, A. C., Häni, C., Bühler, M., Mohn, J., Schrade, S. & Kupper, T. (2023). Ammonia emissions from a dairy housing and wastewater treatment plant quantified with an inverse dispersion method accounting for deposition loss. Journal of the Air and Waste Management Association, 73(12), 930-950. https://doi.org/10.1080/10962247.2023.2271426

Pedersen, J., Hafner, S. D. & Adamsen, A. P. S., (2023). Ammonia emissions from field applied solid manure, No. 2021-0220838, 16 p., Mar 01, 2023.

Andersson, K., Delin, S., Pedersen, J., Hafner, S. D. & Nyord, T. (2023). Ammonia emissions from untreated, separated and digested cattle slurry - Effects of slurry type and application strategy on a Swedish clay soil. Biosystems Engineering, 226, 194-208. https://doi.org/10.1016/j.biosystemseng.2023.01.012

Saugbjerg, J. R., Jensen, T. B., Hinge, M. & Henriksen, M. L. (2023). A modular low-cost automated synthesis machine demonstrated by ring-opening metathesis polymerization. Reaction Chemistry & Engineering , 8(11), 2866-2875. https://doi.org/10.1039/d3re00345k

Gammelgaard, J. J., Sun, Z., Vestergaard, A. K., Zhao, S., Li, Z., Lock, N., Daasbjerg, K., Bagger, A., Rossmeisl, J. & Lauritsen, J. V. (2023). A Monolayer Carbon Nitride on Au(111) with a High Density of Single Co Sites. ACS Nano, 17(17), 17489-17498. https://doi.org/10.1021/acsnano.3c05996

Ramirez Garcia, A., Greppi, A., Constancias, F., Ruscheweyh, H.-J., Gasser, J., Hurley, K., Sturla, S. J., Schwab, C. & Lacroix, C. (2023). Anaerobutyricum hallii promotes the functional depletion of a food carcinogen in diverse healthy fecal microbiota. Frontiers in Microbiomes, 2, Article 1194516. https://doi.org/10.3389/frmbi.2023.1194516

Moustsen, V. A., Seddon, Y. M. & Hansen, M. J. (2023). Animal board invited review: The need to consider emissions, economics and pig welfare in the transition from farrowing crates to pens with loose lactating sows. Animal, 17(9), Article 100913. https://doi.org/10.1016/j.animal.2023.100913

Casini, I., McCubbin, T., Esquivel-Elizondo, S., Luque, G. G., Evseeva, D., Fink, C., Beblawy, S., Youngblut, N. D., Aristilde, L., Huson, D. H., Dräger, A., Ley, R. E., Marcellin, E., Angenent, L. T. & Molitor, B. (2023). An integrated systems biology approach reveals differences in formate metabolism in the genus Methanothermobacter. iScience, 26(10), Article 108016. https://doi.org/10.1016/j.isci.2023.108016

Chioma, F., Okpareke, O., Okafor, S. N. & Ezugwu, C. I. (2023). Antimicrobial, antioxidant, and in silco studies of divalent metal complexes of novel aminopyrimidine Schiff base chelators. Journal of Molecular Structure, 1291, Article 136070. https://doi.org/10.1016/j.molstruc.2023.136070

Milic, M., Domínguez de María, P. & Kara, S. (2023). A patent survey on the biotechnological production of 2,5-furandicarboxylic acid (FDCA): Current trends and challenges. EFB Bioeconomy Journal, 3, Article 100050. https://doi.org/10.1016/j.bioeco.2023.100050

Lu, R., Xie, Z., Christensen, C. S. Q., Luo, S., Nazari, P., Yousefi, O., Wang, Y. & Wei, Z. (2023). A photo-regenerable sponge filter to continuously remove hydrophobic and hydrophilic pollutants for water reuse. Chemical Engineering Journal, 476(146695), Article 146695. https://doi.org/10.1016/j.cej.2023.146695

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