Publications by Molecular and Cellular Biotechnology

Are you looking for publications by Section of Molecular and Cellular Biotechnology? On this page you can find all the publications made by the Section of Molecular and Cellular Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Boffe, P. M., Calegari, R. P., de Souza, D. C. R., da Conceição, P. S., Szymczak, D. A. & Tessaro, D. (2017). Potencial fitoextrator da espécie vegetal Helianthus annuus L. Em solo contaminado por chumbo. Espacios, 38(9), 8.

Mota, L. A., Calegari, R. P., Pinto, A. U., Sica, P., Amorim, D. J., Azevedo, R. A., Gaziola, S. A., Douradinho, R. S., Baptista, A. S. & Arthur, V. (2025). Selenium-biofortified spent yeast cultivated in corn hydrolysate: antioxidant response and biomass production under aerobic and anaerobic conditions. International Microbiology, 28(8), 2829-2844. https://doi.org/10.1007/s10123-025-00722-y

Sica, P., Prado, L. M. L. M., Granja, P., de Carvalho, E. M., Mattos, E. D. C., Calegari, R. P., Silverio, M., Martins, B. C. & Baptista, A. S. (2021). Effects of energy cane (Saccharum spp.) juice on corn ethanol (Zea mays) fermentation efficiency: Integration towards a more sustainable production. Fermentation , 7(1), Article 30. https://doi.org/10.3390/fermentation7010030

Amorim Mota, L., Maria da Silva, A. P., Alberto da Silva, E., Maria Ferreira Lima Leite, G., Perez Calegari, R. & Sampaio Baptista, A. (2022). Ability of the Saccharomyces cerevisiae Y904 to tolerate and adapt to high concentrations of selenium. Brazilian Journal of Biosystems Engineering, 16, Article 1066. https://doi.org/10.18011/bioeng.2022.v16.1066

Stødkilde, L., Ingerslev, A. K., Lærke, H. N., Jørgensen, E. T., Ambye-Jensen, M. & Jensen, S. K. (2025). Evaluating protein digestibility of biorefined forage crops in growing pigs: effects of plant species and precipitation methods. ANIMAL, 19(10), Article 101653. https://doi.org/10.1016/j.animal.2025.101653

Johnsen, N. K., Chaiyasarn, S., Guo, Z., Han, J. & Eser, B. E. (2025). Cobalamin-Dependent Aryl Methyl Ether O-Demethylases: Promising Enzymes for Biocatalytic Applications from Lignin Valorization to Organic Synthesis. ChemCatChem, 17(21), 1-19. Article e00877. https://doi.org/10.1002/cctc.202500877

Ambrose, H. W., Feilberg, A., Schwab, C. & Kofoed, M. V. W. (2025). Impact of chemical and biological additives on microbial community and methane emissions in pig slurry storage. 41. Abstract from 13th International Symposium on Anaerobic Microbiology, Leipzig, Germany.

Jensen, T. B., Anand, M., Batstone, D. & Kofoed, M. V. W. (2025). Here comes the sun: intermittent operation of hydrogen-based in situ biomethanation at pilot-scale. Applied Energy, 401(Part A), Article 126601. https://doi.org/10.1016/j.apenergy.2025.126601

Ambrose, H. W., Bambace, M. F., Marietou, A., Hosek, J., Feilberg, A., Kofoed, M. V. W. & Schwab, C. (2025). Novel Biological Approach to Mitigate Methane Emissions from Livestock Slurry through Microbial Conversion of Glycerol. Environmental Science & Technology, 59(38), 20512-20525. https://doi.org/10.1021/acs.est.4c12999

Wang, H., Jeon, B. S., Ortiz-Ardila, A. E. & Angenent, L. T. (2025). Steering the Chain-Elongating Microbiome to C8 or C6 Production with Ethanol and Lactate as Coelectron Donors. Environmental Science and Technology, 59(32), 16947-16958. https://doi.org/10.1021/acs.est.5c01461

Rasmussen, M. H., Møller, S. L. B., Svenningsen, E. B., Tørring, T. & Poulsen, T. B. (2025). P450 Enzyme LyoI Performs Hydro-2,2'-Bifuran Oxidation in the Polyether Ionophore Lysocellin. Angewandte Chemie International Edition, 64(43), Article e202507847. https://doi.org/10.1002/anie.202507847

Calegari, R. P., Mendes, K. F., Martins, B. C., Pimpinato, R. F., Baptista, A. S. & Tornisielo, V. L. (2018). Removal of diuron and hexazinone from public water supply using a filter system. Planta Daninha, 36, Article e018183662. https://doi.org/10.1590/S0100-83582018360100147

Silva, A. P. M. D., Sica, P., Pires, L. D. A. N., Spironello, L., Mota, L. A., Peixoto, G. T., Calegari, R. P., Basso, T. O., Tonso, A., Gomes, M. P., Somessari, S. L., Duarte, H. G., Somessari, E. S. R., Carvalho, R. D. S. & Baptista, A. S. (2023). Integration of Corn and Cane for Ethanol Production: Effects of Lactobacilli Contamination on Fermentative Parameters and Use of Ionizing Radiation Treatment for Disinfection. Fermentation , 9(2), Article 89. https://doi.org/10.3390/fermentation9020089

Fieira, C., Oliveira, F., Calegari, R. P., Machado, A. & Coelho, A. R. (2013). In vitro and in vivo antifungal activity of natural inhibitors against Penicillium expansum. Food Science and Technology (Brazil), 33(SUPPL.1), 40-46. https://doi.org/10.1590/S0101-20612013000500007

Silverio, M. S., Calegari, R. P., Leite, G. M. F. L., Prado, L. M. L. M., Martins, B. C., da Silva, E. A., Neto, J. P., Gomig, A. & Baptista, A. S. (2021). VINASSE FROM THE BRAZILIAN LIGNOCELLULOSIC ETHANOL PROCESS: CHEMICAL COMPOSITION AND POTENTIAL FOR BIOPROCESSES. Brazilian Journal of Biosystems Engineering, 15(1), 42-68. https://doi.org/10.18011/bioeng2021v15n1p42-68

Anacleto, T. M., Oliveira, H. R., da Silva, C. F. C., Calegari, R. P., Rocha, M. E., Figueira, T. A., Silva, M. C., Masuda, L. S. M., Paquet, R., de Oliveira, V. P. & Enrich-Prast, A. (2022). ANAEROBIC DIGESTION AS A TOOL TO REDUCE ANTHROPOGENIC IMPACTS ON AQUATIC ECOSYSTEMS. Arquivos Brasileiros de Psicologia, 26(2), 169-186. https://doi.org/10.4257/oeco.2022.2602.07

Calegari, R. P., da Silva, E. A., da Silva, A. P. M., Gomes, M. P., Mota, L. A., Arthur, V. & Baptista, A. S. (2023). Wort disinfection treatment with electron beam for bioethanol production. Scientia Agricola, 80, Article e20210260. https://doi.org/10.1590/1678-992X-2021-0260

Johnsen, N. K., Marcher, D. M. W., Nielsen, M. B., Zhang, Y., Guo, Z. & Eser, B. E. (2025). A Thermostable Fatty Acid Hydratase from Marinitoga Piezophila with Low Temperature Optimum and Broad Product Scope. ChemBioChem, 26(17), Article e202500081. https://doi.org/10.1002/cbic.202500081

Mekureyaw, M. F., Junker, A., Bai, L., Petersen, A. E., Wei, Z. & Guo, Z. (2025). Biodegradation of perfluorooctanoic acid (PFOA) by laccase from Agaricus bisporus via oxidative decarboxylation. Journal of Hazardous Materials Advances, 19, 1-11. Article 100837. https://doi.org/10.1016/j.hazadv.2025.100837

Huang, Z., Piao, Y., Abuduwupuer, X., Ding, S., Chen, T., Jiang, S., Ding, Y., Guo, Z. & Gao, R. (2025). Design of a recombinant Pseudomonas strain with enhanced degradation viability towards catecholic compounds by reconstituting EDO-hydrolysis pathway. Journal of Environmental Chemical Engineering, 13(5), 1-12. Article 118338. https://doi.org/10.1016/j.jece.2025.118338

Zhou, M., Usack, J. G., Smith, A. M. & Angenent, L. T. (2025). Toxicity and biodegradation of two different hydrothermal liquefaction process waters for anaerobic digestion and the effect of microaeration. Chemical Engineering Journal, 520, Article 165540. https://doi.org/10.1016/j.cej.2025.165540

Benmebarek, I. E., González-Serrano, D. J., Bechtner, J. D., Galindo, J. M., Martínez, M. M., Sánchez-Verdú, M. P., Khalid, W. & Moreno, A. (2025). Microwave-assisted subcritical water extraction of low methoxyl pectin from pistachio industry waste: Optimization, characterization, emulsification, and gelation mechanism. Carbohydrate Polymers, 368, Article 124107. https://doi.org/10.1016/j.carbpol.2025.124107

Bechtner, J. D., Lopez-Rodulfo, I. M., Gallego-Lobillo, P., Hosek, J., Schwab, C. & Martinez, M. M. (2025). Polyphenols non-covalently bound to artificial plant cell walls are readily accessible to fecal microbiota and transiently alter fermentation activity. Food Chemistry, 493(part 2), Article 145817. https://doi.org/10.1016/j.foodchem.2025.145817

Ng, K. S. (2025). Old natural compounds that are underexploited: Antimicrobial mode of action of short-chain carboxylic acids and their potential as biopreservatives. [PhD dissertation, Aarhus University].

Sommer, S. G., Christensen, M. L., Norddahl, B., Ambye-Jensen, M. & Roda-Serrat, M. C. (Eds.) (2025). Bioprocesses: A Comprehensive Guide to Sustainable Resources in the Non-Fossil Era. Cambridge University Press. https://doi.org/10.1017/9781108950831

Ma, Y. (2024). Design of Enzymatic Oxyfunctionalizations Catalyzed by Fusion Enzymes in Non-aqueous Media. [PhD dissertation, Aarhus University].

Rohbohm, N. & Angenent, L. T. (2025). A development study for liquid- and vapor-fed anode zero-gap bioelectrolysis cells. iScience, 28(7), Article 112959. https://doi.org/10.1016/j.isci.2025.112959

Klein, V. J., Troøyen, S. H., Brito, L. F., Courtade, G., Brautaset, T. & Irla, M. K. (2024). Identification and characterization of a novel formaldehyde dehydrogenase in Bacillus subtilis. Applied and Environmental Microbiology, 90(11). https://doi.org/10.1128/aem.02181-23

Irla, M., Nærdal, I., Virant, D., Brautaset, T., Busche, T., Goranovič, D., Haupka, C., Heux, S., Kosec, G., Rückert-Reed, C., Wendisch, V. F., Brito, L. F. & Vicente, C. M. (2025). Systems-level analysis provides insights on methanol-based production of L-glutamate and its decarboxylation product γ-aminobutyric acid by Bacillus methanolicus. Metabolic Engineering, 91, 389-404. https://doi.org/10.1016/j.ymben.2025.06.002

Stødkilde, L., Jensen, M. S., Jørgensen, E. T., Ambye-Jensen, M. & Eskildsen, M. (2025). Grass-based feeding strategies for organic growing-finishing pigs during temperate summer conditions. Livestock Science, 298, Article 105748. https://doi.org/10.1016/j.livsci.2025.105748

Alamia, A., Ambrose, H. W. & Rattigan, E. (2025). Techno-Economic Integration of Power-to-X Methanation in Biogas Systems: System-Level Optimization Based on Experimental Research. Poster session presented at 33rd European Biomass Conference & Exhibition , Valencia, Spain.

Ambrose, H. W., Engelbrecht, N., Alamia, A. & Kofoed, M. V. W. (2025). Biomethanation With Renewable Energy: Harnessing the Carbon-Water-Energy Nexus. Abstract from 33rd European Biomass Conference & Exhibition , Valencia, Spain.

Plesner, T. J., Wang, F., Ouyang, Y., Khazaee, Z., Zhou, P., Zhang, M., Eser, B. E., Zhang, Y. & Guo, Z. (2025). Cooperative action from Cu-centered MOF and a laccase for enhanced decolorization of synthetic dyes. Biochemical Engineering Journal, 221, 1-10. Article 109807. https://doi.org/10.1016/j.bej.2025.109807

Mathiasen, S. S., Guo, Z., Fritzen, A. M., Kiens, B., Kleinert, M. & Wiking, L. (2025). Physical properties and stability of milk fat retentate fraction from short-path distillation. International Dairy Journal, 169, Article 106310. https://doi.org/10.1016/j.idairyj.2025.106310

Sieborg, M. U. (2023). Giving CO2 a second chance. [PhD dissertation, Aarhus University]. Aarhus University - Department of Biological and Chemical Engineering.

Tørring, T. (2011). Controlling Function and Structure with DNA.

Falkeborg, M. (2015). Development of Innovative Ingredients for Improved Microencapsulation. River Publishers.

Larsen, C. K. (2023). Mining the Unexplored Microbiome to Produce High-value Biopharmaceuticals. [PhD dissertation, Aarhus University]. Aarhus Universitet.

Paz, L.-C. (2016). Beneficial Bacterial Symbionts of Earthworms: Insights into Symbiont Transmission and Metabolic Impact on their Host.

Ambye-Jensen, M. (2014). Ensiling as pretreatment of grass for lignocellulosic biomass conversion.

Kofoed, M. (2010). Diversity and Regulation of Nitrate-Reducing and Denitrifying Bacteria in Aquatic Systems. Det Naturvidenskabelige Fakultet, Aarhus Universitet.

Sørensen, M. F., Andrade, T. A., dos Passos, N. H. M. & Ambye-Jensen, M. (2025). Influence of substrate concentration on single-cell protein production from green biorefinery residual juice. Bioresource Technology Reports, 30, Article 102151. https://doi.org/10.1016/j.biteb.2025.102151

Baur, S. T., Schulz, S., McCluskey, J. B., Velázquez Gómez, J. A., Angenent, L. T. & Molitor, B. (2025). Deletion of aldehyde:ferredoxin oxidoreductase-encoding genes in Clostridium ljungdahlii results in changes in product spectrum with various carbon sources. Bioresource Technology, 431, Article 132596. https://doi.org/10.1016/j.biortech.2025.132596

Wijesooriya, M. M., Vithanage, M. & Wijesekara, H. (2025). Underestimated Threats: Personal Care Products (PCPs) in Marine and Coastal Environments. In M. Vithanage, S. M. Samarasekara, B. D. James & C. M. Reddy (Eds.), Coastal and Marine Pollution: Source to Sink, Mitigation and Management (pp. 225-248). Wiley. https://doi.org/10.1002/9781394237029.ch12

Sieborg, M. U. & Kofoed, M. V. W. (2025). Gamle processer, nye muligheder: Nyt kemisk-biologisk koncept til CO2-fangst og omdannelse. Dansk Kemi, 106(2), 12-14. Article 106. https://ipaper.ipapercms.dk/TechMedia/DanskKemi/2025/2/?page=12

Ouyang, Y., Zhang, C., Wang, J., Guo, Z., Wang, Z. & Dong, M. (2025). Gate-Tunable Dual-Mode Optoelectronic Device for Self-Powered Photodetector and Optoelectronic Synapse. Advanced Science, 12(17), Article 2416259. https://doi.org/10.1002/advs.202416259