Publications by Bioprocess Engineering

Are you looking for publications by Section of Bioprocess Engineering? On this page you can find all the publications made by the Section of Bioprocess Engineering - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Busk, M., Eggertsen, P. P., Overgaard, J., Horsman, M. R., Tørring, T., Jacobsen, K. M. & Poulsen, T. B. (2023). In Vitro Characterization of the Bacteria-derived Hypoxia-selective Cytotoxin BE-₄₃₅₄₇. Anticancer Research, 43(12), 5319-5329. https://doi.org/10.21873/anticanres.16735

Kuipers, S. B. & Kofoed, M. V. W. (2023). Biomethanation of syngas in packed bed reactors: A study of adaptation and microbial pathways in a thermophilic mixed consortium. Bioresource Technology Reports, 24, Article 101667. https://doi.org/10.1016/j.biteb.2023.101667

Dai, R., Dai, C., Hou, S., He, Q., Liu, B., Huang, M., Jiang, H., Li, M. H., Pan, L., Guo, Z., Kim, J., Han, M., Yamauchi, Y. & Xu, X. (2023). Opportunities and challenges of hydrotalcite-related electrocatalysts for seawater splitting: a systematic perspective from materials synthesis, characterization and application. Journal of Materials Chemistry A, 11(38), 20383-20407. https://doi.org/10.1039/d3ta02524a

Cheng, W., Yu, B., Zheng, Y., Yang, P., Ke, Z., Zhou, X., Guo, Z., Xu, X., Ding, Y. & Liu, S. (2024). Chemical enrichment of conjugated linoleic acid in cottonseed oil using ruthenium nanoparticle immobilized on chemically modified multiwalled carbon nanotube as heterogeneous nanocatalyst. Journal of the American Oil Chemists' Society, 101(11), 1133-1143. https://doi.org/10.1002/aocs.12785

Zhou, P., Liu, W., Zhang, Y., Liu, G., Zhao, Z., Zhang, M., Wei , Z., Zhang, Y., Tang, X., Li, P., Deng, Y., Zhang, M. & Guo, Z. (2023). Tuning multi-purpose glycerol-based deep eutectic solvents for biocatalytic deacidification of high-acid rice bran oil: Kinetics, mechanism, and inhibition of side glycerolysis. LWT - Food Science and Technology, 189, Article 115535. https://doi.org/10.1016/j.lwt.2023.115535

Engelbrecht, N., Sieborg, M. U., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Metabolic heat production impacts industrial upscaling of ex situ biomethanation trickle-bed reactors. Energy Conversion and Management, 299, Article 117769. https://doi.org/10.1016/j.enconman.2023.117769

Marietou, A., Schmidt, J. S., Rasmussen, M. R., Scoma, A., Rysgaard, S. & Vergeynst, L. (2023). The effect of hydrostatic pressure on the activity and community composition of hydrocarbon-degrading bacteria in Arctic seawater. Applied and Environmental Microbiology, 89(11), Article e0098723. https://doi.org/10.1128/aem.00987-23

Zoppi, G., Andrade, T. A., Ward, A. J., Ambye-Jensen, M. & Biller, P. (2023). Biorefinery integration of a green protein platform for maximum resource utilization. Cleaner and Circular Bioeconomy, 6, Article 100064. https://doi.org/10.1016/j.clcb.2023.100064

Casini, I., McCubbin, T., Esquivel-Elizondo, S., Luque, G. G., Evseeva, D., Fink, C., Beblawy, S., Youngblut, N. D., Aristilde, L., Huson, D. H., Dräger, A., Ley, R. E., Marcellin, E., Angenent, L. T. & Molitor, B. (2023). An integrated systems biology approach reveals differences in formate metabolism in the genus Methanothermobacter. iScience, 26(10), Article 108016. https://doi.org/10.1016/j.isci.2023.108016

Sieborg, M. U., Engelbrecht, N., Ottosen, L. D. M. & Kofoed, M. V. W. (2024). Sunshine-to-fuel: Demonstration of coupled photovoltaic-driven biomethanation operation, process, and techno-economical evaluation. Energy Conversion and Management, 299, Article 117767. https://doi.org/10.1016/j.enconman.2023.117767

Schweigerdt, A., D. Stöbener, D., Schäfer, A., Kara, S. & Weinhart, M. (2023). Impact of Amphiphilicity Balance in Hydroxy-Functional, Isomeric, Thermoresponsive Poly(meth)acrylates. Macromolecules, 56(21), 8602-8613. https://doi.org/10.1021/acs.macromol.3c01251

Allan Andrade, T., Ramírez-Márquez, C. & Ambye-Jensen, M. (2023). Process simulation of an integrated green protein biorefinery using nanofiltration membrane and ethanol fermentation. Separation and Purification Technology, 327, Article 124887. https://doi.org/10.1016/j.seppur.2023.124887

Chan, S. W. S., Marami, H., Tayo, L. L., Fog, E., Andrade, T. A., Ambye-Jensen, M., Birkved, M. & Khoshnevisan, B. (2024). Environmental impacts of a novel biorefinery platform integrated with power-to-protein technology to decrease dependencies on soybean imports. Science of the Total Environment, 907, Article 167943. https://doi.org/10.1016/j.scitotenv.2023.167943

L. Garcia, M. & Angenent, L. (2009). Interaction between temperature and ammonia in mesophilic digesters for animal waste treatment. Water Research, 43(9), 2373-2382. https://doi.org/10.1016/j.watres.2009.02.036

D. Perkins, S., Mayfield, J., Fraser, V. & Angenent, L. (2009). Potentially Pathogenic Bacteria in Shower Water and Air of a Stem Cell Transplant Unit. Applied and Environmental Microbiology, 75(16), 5363-5372. https://doi.org/10.1128/AEM.00658-09

Choi, J., Kim, Y., Eser, B. E. & Han, J. (2023). Theoretical study on the glycosidic C-C bond cleavage of 3''-oxo-puerarin. Scientific Reports, 13(1), Article 16282. https://doi.org/10.1038/s41598-023-43379-1

Shen, W., A. Dalby, P., Guo, Z., Li, W., Zhu, C. & Fan, D. (2023). Residue Effect-Guided Design: Engineering of S. Solfataricus β-Glycosidase to Enhance Its Thermostability and Bioproduction of Ginsenoside Compound K. Journal of Agricultural and Food Chemistry, 71(44), 16669–16680. https://doi.org/10.1021/acs.jafc.3c04575

A. Labatut, R., Angenent, L. & R. Scott, N. (2011). Biochemical methane potential and biodegradability of complex organic substrates. Bioresource Technology, 102(3), 2255-2264. https://doi.org/10.1016/j.biortech.2010.10.035

T. Agler, M., A. Wrenn, B., Zinder, S. H. & Angenent, L. (2011). Waste to bioproduct conversion with undefined mixed cultures: the carboxylate platform. Trends in Biotechnology, 29(2), 70-78. https://doi.org/10.1016/j.tibtech.2010.11.006

Li, Z., A. Rosenbaum, M., Venkataraman, A., Kin Tam, T., Katz, E. & Angenent, L. (2011). Bacteria-based AND logic gate: a decision-making and self-powered biosensor. Chemical Communications, 47(11), 3060-3062. https://doi.org/10.1039/C0CC05037G

D. Perkins, S., B. Scalfone, N. & Angenent, L. (2011). Comparative 16S rRNA gene surveys of granular sludge from three upflow anaerobic bioreactors treating purified terephthalic acid (PTA) wastewater. Water Science and Technology, 64(7), 1406–1412. https://doi.org/10.2166/wst.2011.552

Ramirez Garcia, A., Greppi, A., Constancias, F., Ruscheweyh, H.-J., Gasser, J., Hurley, K., Sturla, S. J., Schwab, C. & Lacroix, C. (2023). Anaerobutyricum hallii promotes the functional depletion of a food carcinogen in diverse healthy fecal microbiota. Frontiers in Microbiomes, 2, Article 1194516. https://doi.org/10.3389/frmbi.2023.1194516

Høgsgaard, K., Vidal, N. P., Marietou, A., Fiehn, O. G., Li, Q., Bechtner, J., Catalano, J., Martinez, M. M. & Schwab, C. (2023). Fucose modifies short chain fatty acid and H2S formation through alterations of microbial cross-feeding activities. FEMS Microbiology Ecology, 99(10), Article fiad107. https://doi.org/10.1093/femsec/fiad107

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Kiens, B., Guo, Z. & Wiking, L. (2023). Novel milk fat fractions for health and functionality obtained by short path distillation.

A. TerAvest, M., He, Z., A. Rosenbaum, M., C. Martens, E., Cotta, M. A., Gordon, J. I. & Angenent, L. (2013). Regulated expression of polysaccharide utilization and capsular biosynthesis loci in biofilm and planktonic. Biotechnology and Bioengineering, 111(1), 165-173. https://doi.org/10.1002/bit.24994

Ambrose, H. W., Dalby, F. R., Feilberg, A. & Kofoed, M. V. W. (2023). Mitigation of methane emission from pig slurry storage with sodium dodecyl sulfate and hydrogen peroxide treatments. 222. Poster session presented at RAMIRAN, Cambridge, United Kingdom.

Yesiltas, B., Garcia-Moreno, P. J., Sørensen, A.-D. M., Banerjee, C., Anankanbil, S., Guo, Z., Ogilby, P. R. & Jacobsen, C. (2023). The Use of Soy and Egg Phosphatidylcholines Modified with Caffeic Acid Enhances the Oxidative Stability of High-Fat (70%) Fish Oil-in-Water Emulsions. Colloids and Interfaces , 7(3), Article 60. https://doi.org/10.3390/colloids7030060

Dalby, F. R., Ambrose, H. W., Poulsen, J. S., Nielsen, J. J. L. & Adamsen, A. P. S. (2023). Pig slurry organic matter transformation and methanogenesis at ambient storage temperatures. Journal of Environmental Quality, 52(6), 1139-1151. https://doi.org/10.1002/jeq2.20512

De Vrieze, J., Raport, L., Willems, B., Verbrugge, S., Volcke, E., Meers, E., Angenent, L. & Boon, N. (2015). Inoculum selection influences the biochemical methane potential of agro-industrial substrates. Microbial Biotechnology, 8(5), 776–786. https://doi.org/10.1111/1751-7915.12268.

E. Miller, K., Lai, C.-T., S. Friedman, E., Angenent, L. & Lipson, D. A. (2015). Methane suppression by iron and humic acids in soils of the Arctic Coastal Plain. Soil Biology and Biochemistry, 83, 176-183. https://doi.org/10.1016/j.soilbio.2015.01.022

del Agua, I., G. Usack, J. & Angenent, L. (2015). Comparison of semi-batch vs. continuously fed anaerobic bioreactors for the treatment of a high-strength, solids-rich pumpkin processing wastewater. Environmental Technology, 36(15), 1974-1983. https://doi.org/10.1080/09593330.2015.1018842

Gavazza, S., Guzman, J. J. L. & Angenent, L. (2015). Electrolysis within anaerobic bioreactors stimulates breakdown of toxic products from azo dye treatment. Biodegradation, 26(2), 151–160. https://doi.org/10.1007/s10532-015-9723-8

Domínguez de María, P., Kara, S. & Gallou, F. (2023). Biocatalysis in Water or in Non-Conventional Media? Adding the CO2 Production for the Debate. Molecules, 28(18), Article 6452. https://doi.org/10.3390/molecules28186452

Huertas-Díaz, L., Kyhnau, R., Ingribelli, E., Neuzil-Bunesova, V., Li, Q., Sasaki, M., Lauener, R. P., Roduit, C., Frei, R., CK-CARE study group, Sundekilde, U. & Schwab, C. (2023). Breastfeeding and the major fermentation metabolite lactate determine occurrence of Peptostreptococcaceae in infant feces. Gut Microbes, 15(1), Article 2241209. https://doi.org/10.1080/19490976.2023.2241209

Pourjafar, M., Saidijam, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2023). Surfaceome Profiling Suggests Potential of Anti-MUC1×EGFR Bispecific Antibody for Breast Cancer Targeted Therapy. Journal of Immunotherapy, 46(7), 245-261. https://doi.org/10.1097/CJI.0000000000000482

Molitor, B., Marcellin, E. & Angenent, L. (2017). Overcoming the energetic limitations of syngas fermentation. Current Opinion in Chemical Biology, 41, 84-92. https://doi.org/10.1016/j.cbpa.2017.10.003

M. Spirito , C., E. Daly, S., J. Werner, J. & Angenent, L. (2018). Redundancy of anaerobic digestion microbiomes during disturbances by the antibiotic monensin. Applied and Environmental Microbiology, 84(9). https://doi.org/10.1128/AEM.02692-17

Gylling, M., Nord-Larsen, T., Bruhn, A., Thomsen, M., Ambye-Jensen, M., Mortensen, E. Ø. & Jørgensen, U. (2023). Potential Danish biomass production and utilization in 2030. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA Report No. 219 https://dcapub.au.dk/djfpublikation/djfpdf/DCArapport219.pdf

Tesson, S. V. M., Barbato, M. & Rosati, B. (2023). Aerosolization flux, bio-products, and dispersal capacities in the freshwater microalga Limnomonas gaiensis (Chlorophyceae). Communications Biology, 6(1), Article 809. https://doi.org/10.1038/s42003-023-05183-5

Vaupel, S., Mau, R., Kara, S., Seitz, H., Kragl, U. & Meyer, J. (2023). 3D printed and stimulus responsive drug delivery systems based on synthetic polyelectrolyte hydrogels manufactured via digital light processing. Journal of Materials Chemistry B, 28(11), 6547-6559. https://doi.org/10.1039/D3TB00285C

De Santis, P., Wegstein, D., O. Burek, B., Patzsch, J., Alcalde, M., Kroutil, W., Z. Bloh, J. & Kara, S. (2023). Robust Light Driven Enzymatic Oxyfunctionalization Via Immobilization of Unspecific Peroxygenase. ChemSusChem, 16(23), Article e202300613. https://doi.org/10.1002/cssc.202300613

Röllig, R., Paul, C. E., Rousselot-Pailley, P., Kara, S. & Alphand, V. (2023). Hybrid catalysis for enantioselective Baeyer-Villiger oxidation and stereoselective epoxidation: A Cp*Ir complex to fuel FMN and FAD reduction for flavoprotein monooxygenase modules. Reaction Chemistry & Engineering , 8(12), 3117-3123. https://doi.org/10.1039/d3re00411b

Jopp, S., Fleischhammer, T., Lavrentieva, A., Kara, S. & Meyer, J. (2023). Synthesis, biocompatibility, and antimicrobial properties of glucose-based ionic liquids. RSC Sustainability, 1(7), 1751-1764. https://doi.org/10.1039/d3su00191a

Nguyen, M., C. Holmes, E. & Angenent, L. (2021). The short-term effect of residential home energy retrofits on indoor air quality and microbial exposure: a case-control study. PLoS One, 16(9 September), Article e0230700. https://doi.org/10.1371/journal.pone.0230700

Magdalena, J. A., Angenent, L. & G. Usack, J. (2022). The measurement, application, and effect of oxygen in microbial fermentations: Focusing on methane and carboxylate production. Fermentation , 8(4), Article 138. https://doi.org/10.3390/fermentation8040138

Klask, C.-M., Jäger, B., Casini, I., Angenent, L. & Molitor, B. (2022). Genetic Evidence Reveals the Indispensable Role of the rseC Gene for Autotrophy and the Importance of a Functional Electron Balance for Nitrate Reduction in Clostridium ljungdahlii. Frontiers in Microbiology, 13, Article 887578. https://doi.org/10.3389/fmicb.2022.887578

Marcellin, E., Angenent, L., K. Nielsen, L. & Molitor, B. (2022). Recycling carbon for sustainable protein production using gas fermentation. Current Opinion in Biotechnology, 76, Article 102723. https://doi.org/10.1016/j.copbio.2022.102723

Palomo-Briones, R., Xu, J., M. Spirito , C., G. Usack, J., H. Trondsen, L., Guzman, J. J. L. & Angenent, L. (2022). Near-neutral pH increased n-caprylate production in a microbiome with product inhibition of methanogenesis. Chemical Engineering Journal, 446(Part 3), Article 137170. https://doi.org/10.1016/j.cej.2022.137170

P. Shaffer, J., Nothias, L.-F., R. Thompson, L., G. Sanders, J., A. Salido, R., P. Couvillion, S., Brejnrod, A. D., Lejzerowicz, F., Haiminen, N., Huang, S., L. Lutz, H., Zhu, Q., Martino, C., T. Morton, J., Karthikeyan, S., Nothias-Esposito, M., Dührkop, K., Böcker, S., Kim, H. W. ... The Earth Microbiome Project 500 (EMP500) Consortium (2022). Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity. Nature Microbiology, 7(12), 2128–2150. https://doi.org/10.1038/s41564-022-01266-x

A. Labatut, R., Angenent, L. & Scott, N. R. (2022). Characterizing the influence of wastewater composition and lignin content on anaerobic biodegradability. Environmental Science: Water Research & Technology, 8(7), 1507-1520. https://doi.org/10.1039/D2EW00077F

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