Publications

Under publication list you can find a complete list of the publications that are written by employees at the Publications at Department of Biological and Chemical Engineering for example journal articles, books, reports etc.

The department also publishes technical reports which you can read more about under Technical reports.

Under PhD dissertations you will find the department's published PhD dissertations.

Publication list

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Hafner, S. D., Hutchings, N., Fuss, R., Häni, C., Kamp, J. N., Mathivanan, G. P., Pacholski, A. S., Pedersen, J., Petersen, V. & Sommer, S. G. (2023). Progress in estimation of ammonia loss from field-applied slurry: ALFAM2 model developments. Abstract from RAMIRAN, Cambridge, United Kingdom.

Bogojevic, O. (2023). Programmable Synthesis of Designer Lipids and Phospholipids - Linking Chemistry and Physics with Function and Production. Århus Universitet.

Darki, A. A., Parthenopoulos, A., Nygaard, J. V. & Dantan, A. (2020). Profilometry and stress analysis of suspended nanostructured thin films. J. Appl. Phys., 129(6), Article 065302. https://doi.org/10.1063/5.0037406

Wen, J. (2024). Profiling photo- and thermochemical degradation of short-chain PFAS. Aarhus University.

Matayeva, A., Fasolini, A., Bianchi, D., Chiaberge, S., De Maron, J. & Basile, F. (2023). Production of biocrude from organic waste: Influence of feedstock composition on hydrodenitrogenation reactivity in biocrude upgrading. Fuel, 335, Article 126981. https://doi.org/10.1016/j.fuel.2022.126981

Allan Andrade, T., Ramírez-Márquez, C. & Ambye-Jensen, M. (2023). Process simulation of an integrated green protein biorefinery using nanofiltration membrane and ethanol fermentation. Separation and Purification Technology, 327, Article 124887. https://doi.org/10.1016/j.seppur.2023.124887

Vernet, G., Hobisch, M. & Kara, S. (2022). Process intensification in oxidative biocatalysis. Current Opinion in Green and Sustainable Chemistry, 38, Article 100692. https://doi.org/10.1016/j.cogsc.2022.100692

Meyer, L.-E., Hobisch, M. & Kara, S. (2022). Process intensification in continuous flow biocatalysis by up and downstream processing strategies. Current Opinion in Biotechnology, 78, Article 102835. https://doi.org/10.1016/j.copbio.2022.102835

Andrade, T. A. & Ambye-Jensen, M. (2022). Process Integration and Techno-Economic Assessment of a Green Biorefinery Demonstration Scale Platform for Leaf Protein Production. In L. Montastruc & S. Negny (Eds.), Computer Aided Chemical Engineering: 32nd European Symposium on Computer Aided Process Engineering (Vol. 51, pp. 877-882). Article 147 Elsevier. https://doi.org/10.1016/B978-0-323-95879-0.50147-8, https://doi.org/10.1016/B978-0-323-95879-0.50147-8

Petermeier, P. (2023). Process Engineering of Cascade Strategies for the Synthesis of Indigo Dye and Hydroxystyrene Monomers. Aarhus University.

Merhi, Y., Betancur, P. F., Ripolles, T. S., Suetta, C., Brage-Andersen, M. R., Hansen, S. K., Frydenlund, A., Nygaard, J. V., Mikkelsen, P. H., Boix, P. P. & Agarwala, S. (2023). Printed dry electrode for neuromuscular electrical stimulation (NMES) for e-textile. Nanoscale, 15(11), 5337-5344. https://doi.org/10.1039/d2nr06008f

Hacene, S., Le Friec, A., Desmoulin, F., Robert, L., Colitti, N., Fitremann, J., Loubinoux, I. & Cirillo, C. (2022). Present and future avenues of cell-based therapy for brain injury: The enteric nervous system as a potential cell source. Brain Pathology, 32(5), Article e13105. https://doi.org/10.1111/bpa.13105

Ali, I., Pakharukov, Y. V., Shabiev, F. K., Galunin, E. V., Safargaliev, R. F., Vasiljev, S. A., Ezdin, B. S., Burakov, A. E., ALOthman, Z. A. & Sillanpää, M. (2023). Preparation of graphene based nanofluids: Rheology determination and theoretical analysis of the molecular interactions of graphene nanoparticles. Journal of Molecular Liquids, 390, Article 122954. https://doi.org/10.1016/j.molliq.2023.122954

Kara, S. & Rudroff, F. (2021). Preface. In Enzyme Cascade Design and Modelling (pp. v-vi). Springer International Publishing.

Boudissa, R., Zerrougui, Z., Ghebouli, M. A., Bouferrache, K., Krache, L., Chihi, T., Ghebouli, B., Habila, M. A., Fatmi, M. & Sillanpää, M. (2024). Prediction study of structural, electronic and optical properties of 4C₁₆H₁₀Br₂O₂ Bis (m-bromobenzoyl) methane crystals. Biochemistry and Biophysics Reports, 37, Article 101601. https://doi.org/10.1016/j.bbrep.2023.101601

Boudissa, R., Madkour, Y., Chihi, T., Ghebouli, M. A., Bouandas, H., Benlakhdar, F., Fatmi, M., Ghebouli, B., Albaqami, M. D., Mohammad, S., Habila, M. & Sillanpää, M. (2024). Prediction study of Optical, structural and electronic properties of WClx (x = 3 to 6). Computational and Theoretical Chemistry, 1239, Article 114792. https://doi.org/10.1016/j.comptc.2024.114792

Mendanha dos Santos, T., Zhou, R., Ottosen, C.-O., Smith, A. M., Schluttenhofer, S. S., Sørensen, I. U. & Larsen, S. U. (2023). Predicting robustness of growing media blends for horticultural crops created from renewable constituents. Poster session presented at I International Symposium on Growing Media, Compost Utilization and Substrate Analysis for Soilless Cultivation, Quebec city, Canada.

Dalby, F. R., Hafner, S. D. & Adamsen, A. P. S. (2023). Predicting methane emission from liquid manure and exploring mitigation options with integrated farm-scale modelling using the ABM model. 28. Abstract from RAMIRAN, Cambridge, United Kingdom.

Schmitz, L. M., Kreitli, N., Molitor, B., Weber, N., Obermaier, L., Rychlik, M. & Angenent, L. (2022). Power-to-protein micronutrient-enriched biomass from electric power and carbon dioxide. Poster session presented at Gordon Research Conference - Molecular Basis of Microbial One-Carbon Metabolism, Southbridge, Massachusetts, United States.

Zhang, M., Timoshin, A., Al-Ammar, E. A., Sillanpaa, M. & Zhang, G. (2023). Power, cooling, freshwater, and hydrogen production system from a new integrated system working with the zeotropic mixture, using a flash-binary geothermal system. Energy, 263(Part D), Article 125959. https://doi.org/10.1016/j.energy.2022.125959

Kai, P. & Jacobsen, B. H., (2024). Poultry housing: Summary and analysis: Memorandum prepared as a basis for the revision of the BAT (Best Available Techniques) requirements of the Livestock Approval Order, No. 2024-0708961 (2022-0460383 Danish Memorandum), 15 p., Nov 29, 2024. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Rodriguez-Dominguez, M. A., Biller, P., Carvalho, P. N., Brix, H. & Arias, C. A. (2021). Potential use of plant biomass from treatment wetland systems for producing biofuels through a biocrude green-biorefining platform. Energies, 14(23), Article 8157. https://doi.org/10.3390/en14238157

Gylling, M., Nord-Larsen, T., Bruhn, A., Thomsen, M., Ambye-Jensen, M., Mortensen, E. Ø. & Jørgensen, U. (2023). Potential Danish biomass production and utilization in 2030. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA Report No. 219 https://dcapub.au.dk/djfpublikation/djfpdf/DCArapport219.pdf

Dalby, F. R., Wang, R. & Hansen, M. J. (2024). Potential contribution of feed spillage in pig barns to slurry methane emission. Abstract from International symposium on gas and dust emissions from livestock (2024), Valencia, Spain.

Romani Fernandez, L. G., Spillner, E. & Jakob, T. (2023). Potential and limitations of epitope mapping and molecular targeting in Hymenoptera venom allergy. Frontiers in Allergy, 4, Article 1327391. https://doi.org/10.3389/falgy.2023.1327391

Tan, K. A., Lalung, J., Morad, N., Ismail, N., Omar, W. M. W., Khan, M. A., Sillanpää, M. & Rafatullah, M. (2021). Post-treatment of palm oil mill effluent using immobilised green microalgae chlorococcum oleofaciens. Sustainability (Switzerland), 13(21), Article 11562. https://doi.org/10.3390/su132111562

Hansen-Felby, M., Henriksen, M. L., Pedersen, S. U. & Daasbjerg, K. (2022). Postfunctionalization of Self-Immolative Poly(dithiothreitol) Using Steglich Esterification. Macromolecules, 55(13), 5788-5794. https://doi.org/10.1021/acs.macromol.2c00551

Sørensen, H. T., Nielsen, J. Ø., Nielsen, F. E. & Kidmose, L. (1991). Possible clinical implications of reduced cardiac vagal function in chronic alcoholics. Alcohol and Alcoholism, 26(3), 375-376. https://doi.org/10.1093/oxfordjournals.alcalc.a045125

Tigari, G., Manjunatha, J. G., Nagarajappa, H., Tighezza, A. M., Albaqami, M. D. & Sillanpaa, M. (2024). Poly(riboflavin)/NaOH/graphene nanoplatelets modified graphite composite paste electrode for the determination of antioxidant rutin. Journal of Food Measurement and Characterization, 18(2), 1238-1252. https://doi.org/10.1007/s11694-023-02253-4

Moulya, K. P., Manjunatha, J. G., Aljuwayid, A. M., Habila, M. A. & Sillanpaa, M. (2023). Polymer modified carbon paste electrode for the electrochemical analysis of Tartrazine. Results in Chemistry, 5, Article 100809. https://doi.org/10.1016/j.rechem.2023.100809

Wollesen, M., Mikkelsen, K., Tvilum, M. S., Vestergaard, M., Wang, M., Meyer, R. L., Ingmer, H., Poulsen, T. & Tørring, T. (2023). Polyether Ionophore Antibiotics Target Drug-Resistant Clinical Isolates, Persister Cells, and Biofilms. Microbiology Spectrum, 11(4), Article e0062523. https://doi.org/10.1128/spectrum.00625-23

Ssepuya, F., Odongo, S., Musa Bandowe, B. A., Abayi, J. J. M., Olisah, C., Matovu, H., Mubiru, E., Sillanpää, M., Karume, I., Kato, C. D., Shikuku, V. O. & Ssebugere, P. (2022). Polycyclic aromatic hydrocarbons in breast milk of nursing mothers: Correlates with household fuel and cooking methods used in Uganda, East Africa. Science of the Total Environment, 842, Article 156892. https://doi.org/10.1016/j.scitotenv.2022.156892

Yang, L. X., Li, S. C., Sun, H. L., Ye, F. F., Liu, W. & Luo, S. (2011). Polyacrylamide molecular formulation effects on erosion control of disturbed soil on steep rocky slopes. Canadian Journal of Soil Science, 91(6), 917-924. https://doi.org/10.4141/CJSS10087

Henriksen, M. L., Karlsen, C. B., Klarskov, P. & Hinge, M. (2022). Plastic classification via in-line hyperspectral camera analysis and unsupervised machine learning. Vibrational Spectroscopy, 118, Article 103329. https://doi.org/10.1016/j.vibspec.2021.103329

Husnaa Mohd Taib, S., Moozarm Nia, P., Rasit Ali, R., Izadiyan, Z., Izzah Tarmizi, Z. & Shameli, K. (2024). Plant-assisted synthesis of Fe₃O₄ nanoparticles for catalytic degradation of methyl orange dye and electrochemical sensing of nitrite. Electroanalysis, 36(9), Article e202300422. https://doi.org/10.1002/elan.202300422

Nissen, S. H., Juul, L., Stødkilde, L., Bruhn, A., Ambye-Jensen, M. & Dalsgaard, T. K. (2024). Pilot-scale protein extraction of green seaweed (Ulva spp.) whole biomass and pulp – Investigating biochemical composition and protein digestibility in a rat trial. Food and Bioproducts Processing, 148, 353-364. https://doi.org/10.1016/j.fbp.2024.10.003

Feng, L., Ward, A. J., Ambye-Jensen, M. & Møller, H. B. (2021). Pilot-scale anaerobic digestion of by-product liquid (brown juice)from grass protein extraction using an un-heated anaerobic filter. Process Safety and Environmental Protection, 146, 886-892. https://doi.org/10.1016/j.psep.2020.12.026

Dalby, F. R., Ambrose, H. W., Poulsen, J. S., Nielsen, J. J. L. & Adamsen, A. P. S. (2023). Pig slurry organic matter transformation and methanogenesis at ambient storage temperatures. Journal of Environmental Quality, 52(6), 1139-1151. https://doi.org/10.1002/jeq2.20512

Dalby, F. R., Hafner, S. D., Ambrose, H. W. & Adamsen, A. P. S. (2024). Pig manure degradation and carbon emission: Measuring and modeling combined aerobic–anaerobic transformations. Journal of Environmental Quality, 53(5), 589-603. https://doi.org/10.1002/jeq2.20603

Yang, T., Zhang, Y., Xu, L., Zhu, H., Zhang, J., Guo, Z., Huang, F. & Zheng, M. (2022). pH-Switchable Pickering Interfacial Biocatalysis: One-Pot Enzymatic Synthesis of Phytosterol Esters with Low-Value Rice Bran Oi. ACS Sustainable Chemistry & Engineering, 10(21), 6963–6972. https://doi.org/10.1021/acssuschemeng.1c08719

Swedha, M., Okla, M. K., Abdel-Maksoud, M. A., Kokilavani, S., Kamwilaisak, K., Sillanpää, M. & Khan, S. S. (2023). Photo-Fenton system Fe₃O₄/NiCu₂S₄ QDs towards bromoxynil and cefixime degradation: A realistic approach. Surfaces and Interfaces, 38, Article 102764. https://doi.org/10.1016/j.surfin.2023.102764

Arana Juve, J.-M. (2023). Photocatalytic Destruction of PFAS in A “Concentrate-and-Degrade” Strategy. Århus Universitet.

Kanwal, A., Shahzadi, T., Riaz, T., Zaib, M., Khan, S., Habila, M. A. & Sillanpaa, M. (2023). Photocatalytic Degradation Studies of Organic Dyes over Novel Cu/Ni Loaded Reduced Graphene Oxide Hybrid Nanocomposite: Adsorption, Kinetics and Thermodynamic Studies. Molecules, 28(18), Article 6474. https://doi.org/10.3390/molecules28186474

Arana Juve, J.-M., Donoso Reece, J., S. Wong, M., Wei, Z. & Ateia, M. (2023). Photocatalysts for Chemical-Free PFOA Degradation – What we know and where we go from here? Journal of Hazardous Materials, 462, Article 132651. https://doi.org/10.1016/j.jhazmat.2023.132651

Chanquia, S. N., Vernet Armengol, G. & Kara, S. (2022). Photobioreactors for cultivation and synthesis: Specifications, challenges, and perspectives. Engineering in Life Sciences, 22(12), 712-724. https://doi.org/10.1002/elsc.202100070

Schmermund, L. L. (2021). Photo(bio)catalytic Transformations Employing Light-Dependent Protochlorophyllide Oxidoreductases and an Unspecific Peroxygenase. Århus Universitet.

De Santis, P. (2023). Photobiocatalytic oxyfunctionalization: Design and characterization of heterogenous cascades. Århus Universitet.

Wang, D., Junker, A. L., Sillanää, M., Jiang, Y. & Wei, Z. (2023). Photo-Based Advanced Oxidation Processes for Zero Pollution: Where Are We Now? Engineering, 23, 19-23. https://doi.org/10.1016/j.eng.2022.08.005

Bogojevic, O., Zhang, Y., Daugaard Wolff, C., Nygaard, J. V., Wiking, L., Arevång, C. & Guo, Z. (2023). Phospholipase D-Catalyzed Transphosphatidylation for the Synthesis of Rare Complex Phospholipid Species─Hemi-bis(monoacylglycero)phosphate and Bis(diacylglycero)phosphate. ACS Sustainable Chemistry & Engineering, 11(8), 3506-3516. https://doi.org/10.1021/acssuschemeng.2c07477

Kara, S. & Rudroff, F. (2021). Perspectives: Enzyme Cascade Design and Modelling. In S. Kara & F. Rudroff (Eds.), Enzyme Cascade Design and Modelling (pp. 179-181). Springer. https://doi.org/10.1007/978-3-030-65718-5

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