Publications by Medical Biotechnology

Are you looking for publications by Section of Medical Biotechnology? On this page you can find all the publications made by the Section of Medical Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Lyu, J., Zhang, J., Zhu, J., Chen, S., Han, T., Zhang, Y., Gao, R., Xie, G. & Guo, Z. (2022). Molecular dynamics simulation guided distal mutation of Thermotoga naphthophila β-glucosidase for significantly enhanced synthesis of galactooligosaccharides and expanded product scope. International Journal of Biological Macromolecules, 210, 21-32. https://doi.org/10.1016/j.ijbiomac.2022.05.002

Aagaard, J. B., Sivelle, C., Fischer, M., Byskov, K., Laursen, N. S., Pfützner, W., Jakob, T., Möbs, C., Miehe, M. & Spillner, E. (2022). Nanobody-based human antibody formats act as IgE surrogate in hymenoptera venom allergy. Allergy: European Journal of Allergy and Clinical Immunology, 77(9), 2859-2862. https://doi.org/10.1111/all.15391

Darki, A. A., Dantan, A., Nygaard, J. V., Madsen, S. P., Parthenopoulos, A., Toft-Vandborg, C. & Vandborg, C. (2022). Optical spatial differentiation with ultrathin freestanding subwavelength gratings. I P. Schelkens & T. Kozacki (red.), Optics, Photonics and Digital Technologies for Imaging Applications VII Artikel 121380D SPIE - International Society for Optical Engineering. https://doi.org/10.1117/12.2621186

Kumar Gurumurthy, R., Koster, S., Kumar, N., Meyer, T. F. & Chumduri, C. (2022). Patient-derived and mouse endo-ectocervical organoid generation, genetic manipulation and applications to model infection. Nature Protocols (Online), 17, 1658–1690. https://doi.org/10.1038/s41596-022-00695-6

Dai, R. & Guo, Z. (2022). Pd/Ni-Al hydrotalcite for base-free alcohol oxidation: Dependency of activity and selectivity on palladium precursors and reduction reagents. Molecular Catalysis , 526, Artikel 112403. https://doi.org/10.1016/j.mcat.2022.112403

Yang, T., Zhang, Y., Xu, L., Zhu, H., Zhang, J., Guo, Z., Huang, F. & Zheng, M. (2022). pH-Switchable Pickering Interfacial Biocatalysis: One-Pot Enzymatic Synthesis of Phytosterol Esters with Low-Value Rice Bran Oi. ACS Sustainable Chemistry & Engineering, 10(21), 6963–6972. https://doi.org/10.1021/acssuschemeng.1c08719

Su, Y., Müller, C. A., Xiong, X., Dong, M. & Chen, M. (2022). Reshapable Osteogenic Biomaterials Combining Flexible Melt Electrowritten Organic Fibers with Inorganic Bioceramics. Nano Letters, 22(9), 3583–3590. https://doi.org/10.1021/acs.nanolett.1c04995

Amagat, J., Su, Y., Svejsø, F. H., Friec, A. L., Sønderskov, S. M., Dong, MD., Fang, Y. & Chen, M. (2022). Self-snapping hydrogel-based electroactive microchannels as nerve guidance conduits. Materials Today Bio, 16, Artikel 100437. https://doi.org/10.1016/j.mtbio.2022.100437

Zhang, Y., Breum, N. M. D., Schubert, S., Hashemi, N., Kyhnau, R., Knauf, M. S., Mathialakan, M., Takeuchi, M., Kishino, S., Ogawa, J., Kristensen, P., Guo, Z. & Eser, B. E. (2022). Semi-rational Engineering of a Promiscuous Fatty Acid Hydratase for Alteration of Regioselectivity. ChemBioChem, 23(4), Artikel e202100606. https://doi.org/10.1002/cbic.202100606

Thomsen, E. A., Andersen, S., Marqvorsen, M. H. S., Skipper, K. A., Paludan, S. R. & Mikkelsen, J. G. (2022). Single-Cell Monitoring of Activated Innate Immune Signaling by a d2eGFP-Based Reporter Mimicking Time-Restricted Activation of IFNB1 Expression. Frontiers in cellular and infection microbiology, 11, Artikel 784762. https://doi.org/10.3389/fcimb.2021.784762

Kumar Gurumurthy, R., Pleissner, K.-P., Chumduri, C., Meyer, T. F. & Mäurer, A. P. (2022). Single object profiles regression analysis (SOPRA): a novel method for analyzing high-content cell-based screens. BMC Bioinformatics , 23, Artikel 440 (2022. https://doi.org/10.1186/s12859-022-04981-8

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Guo, Z., Kiens, B. & Wiking, L. (2022). SPECIAL MILK LIPIDS FOR HEALTH (SMiL) - COMBINED FRACTIONATION PROCEDURES TO OBTAIN MILK FAT FRACTIONS WITH HEALTH BENEFICIAL PROFILES. Poster-session præsenteret på Arla Food for Health Conference 2022, Viby, Danmark.

Zhou, Y., Pedersen, J. N., Pedersen, J. N., Jones, N. C., Hoffmann, S. V., Petersen, S. V., Pedersen, J. S., Perriman, A., Gao, R. & Guo, Z. (2022). Superanionic Solvent-Free Liquid Enzymes Exhibit Enhanced Structures and Activities. Advanced Science, 9(32), Artikel 2202359. https://doi.org/10.1002/advs.202202359

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., M. Hacker, S. & Poulsen, T. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. Poster-session præsenteret på EMBO Chemical Biology, Heidelberg, Tyskland.

Svenningsen, E. B., Ottosen, R. N., Jørgensen, K. H., Nisavic, M., Larsen, C. K., Hansen, B. K., Wang, Y., Lindorff-Larsen, K., Tørring, T., Hacker, S. M., Palmfeldt, J. & Poulsen, T. B. (2022). The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21. RSC Chemical Biology, 3(10), 1216-1229. https://doi.org/10.1039/d2cb00161f

Zhang, M., Gao, Y., Yu, C., Wang, J., Weng, K., Li, Q., He, Y., Guo, Z., Zhang, H., Huang, J. & Li, L. (2022). Transcriptome analysis of malate-induced Schizochytrium sp. FJU-512 reveals a novel pathway for biosynthesis of docosahexaenoic acid with enhanced expression of genes responsible for acetyl-CoA and NADPH accumulation. Frontiers in Microbiology, 13, Artikel 1006138. https://doi.org/10.3389/fmicb.2022.1006138

Andersen, F. D., Pedersen, K. D., Wilkens Juhl, D., Mygind, T., Chopin, P., B. Svenningsen, E., Poulsen, T. B., Braad Lund, M., Schramm, A., Gotfredsen, C. H. & Tørring, T. (2022). Triculamin: An Unusual Lasso Peptide with Potent Antimycobacterial Activity. Journal of Natural Products, 85(6), 1514-1521. https://doi.org/10.1021/acs.jnatprod.2c00065

Bell, J. S., Hayes, S., Whitford, C., Sanchez-Weatherby, J., Shebanova, O., Terrill, N. J., Sørensen, T. L. M., Elsheikh, A. & Meek, K. M. (2022). Tropocollagen springs allow collagen fibrils to stretch elastically. Acta Biomaterialia, 142, 185-193. https://doi.org/10.1016/j.actbio.2022.01.041

Zhang, Y., Le Friec, A. & Chen, M. (2021). 3D anisotropic conductive fibers electrically stimulated myogenesis. International Journal of Pharmaceutics, 606, 120841. Artikel 120841. https://doi.org/10.1016/j.ijpharm.2021.120841

Su, Y., Toftdal, M. S., Friec, A. L., Dong, MD., Han, X. & Chen, M. (2021). 3D Electrospun Synthetic Extracellular Matrix for Tissue Regeneration. Small Science, 1(7), Artikel 2100003. https://doi.org/10.1002/smsc.202100003

Su, Y., Li, Q., Amagat, J. & Chen, M. (2021). 3D spring-based piezoelectric energy generator. Nano Energy, 90, Artikel 106578. https://doi.org/10.1016/j.nanoen.2021.106578

Zhang, Y., Eser, B. E. & Guo, Z. (2021). A bi‐enzymatic cascade pathway towards optically pure FAHFAs. ChemBioChem, 22(12), 2146-2153. https://doi.org/10.1002/cbic.202100070

Li, Z., Zhang, Y., Anankanbil, S. & Guo, Z. (2021). Applications of nanocellulosic products in food: Manufacturing processes, structural features and multifaceted functionalities. Trends in Food Science & Technology, 113, 277-300. https://doi.org/10.1016/j.tifs.2021.03.027

Prabakaran, T., Troldborg, A., Kumpunya, S., Alee, I., Marinković, E., Windross, S. J., Nandakumar, R., Narita, R., Zhang, B.-C., Carstensen, M., Vejvisithsakul, P., Marqvorsen, M. H. S., Iversen, M. B., Holm, C. K., Østergaard, L. J., Pedersen, F. S., Pisitkun, T., Behrendt, R., Pisitkun, P. & Paludan, S. R. (2021). A STING antagonist modulating the interaction with STIM1 blocks ER-to-Golgi trafficking and inhibits lupus pathology. EBioMedicine, 66, Artikel 103314. https://doi.org/10.1016/j.ebiom.2021.103314

Dai, R., Eser, B. E. & Guo, Z. (2021). Beyond flower-like structure – The synergy within Pd/Ni-Al hydrotalcite for base-free oxidation of benzyl alcohols. Applied Catalysis A: General, 610, Artikel 117972. https://doi.org/10.1016/j.apcata.2020.117972

Platts-Mills, T., Hilger, C., Jappe, U., van Hage, M., Gadermaier, G., Spillner, E., Lidholm, J., Aalberse, R. C., van Ree, R., Goodman, R. & Pomes, A. (2021). Carbohydrate Epitopes Currently Recognized as Targets for IgE Antibodies. Allergy: European Journal of Allergy and Clinical Immunology, 76(8), 2383-2394. https://doi.org/10.1111/all.14802.

Zong, L., Gao, R., Guo, Z., Shao, Z., Wang, Y. & Eser, B. E. (2021). Characterization and modification of two self-sufficient CYP102 family enzymes from Bacillus amyloliquefaciens DSM 7 with distinct regioselectivity towards fatty acid hydroxylation. Biochemical Engineering Journal, 166, Artikel 107871. https://doi.org/10.1016/j.bej.2020.107871

Garcia Soriano, D. A., Andersen, F. D., Nygaard, J. V. & Tørring, T. (2021). ColFeatures: Automated data extraction and classification of bacterial colonies. bioRxiv. https://doi.org/10.1101/2021.05.27.445853

Li, R., Xu, M.-S., Wang, P., Wang, C.-X., Qu, S.-D., Shi, K.-J., Wei, Y.-H., Xu, X.-G. & Ji, Z.-W. (2021). Combined effects of carrier scattering and Coulomb screening on photoluminescence in InGaN/GaN quantum well structure with high In content. Chinese Physics B, 30(4), 47801. Artikel 047801. https://doi.org/10.1088/1674-1056/abd692

Dai, R., Liu, B., Zhang, Y., Pedersen, J. N., Zhang, X., Dong, M. & Guo, Z. (2021). Copper-based ternary hydrotalcite as a catalyst for hydroxylation of phenolic compounds. Journal of Environmental Chemical Engineering, 9(6), Artikel 106390. https://doi.org/10.1016/j.jece.2021.106390

Meyer, L.-E., Eser, B. E. & Kara, S. (2021). Coupling light with biocatalysis for sustainable synthesis – very recent developments and future perspectives. Current Opinion in Green and Sustainable Chemistry, 31, Artikel 100496. https://doi.org/10.1016/j.cogsc.2021.100496

Zhang, Y., Eser, B. E., Kougioumtzoglou, G., Eser, Z., Poborsky, M., Kishino, S., Takeuchi, M., Ogawa, J., Kristensen, P. & Guo, Z. (2021). Effects of the engineering of a single binding pocket residue on specificity and regioselectivity of hydratases from Lactobacillus Acidophilus. Biochemical Engineering Journal, 171, Artikel 108006. https://doi.org/10.1016/j.bej.2021.108006

Keshvardoostchokami, M., Majidi, S. S., Huo, P., Ramachandran, R., Chen, M. & Liu, B. (2021). Electrospun Nanofibers of Natural and Synthetic Polymers as Artificial Extracellular Matrix for Tissue Engineering. Nanomaterials, 11(1), 1-23. Artikel 21. https://doi.org/10.3390/nano11010021

Frydenlund, A., Poggi, A. I., Hansen, S. K., Brage-Andersen, M., Merhi, Y., Agarwala, S., Mikkelsen, P. H., Nygaard, J. V., Steffensen, I. E. & Suetta, C. (2021). Elektrisk stimulation mod muskel- og funktionstab hos en patient indlagt med COVID-19. Ugeskrift for Læger, 183(20), 1-4. Artikel V03210275. https://ugeskriftet.dk/files/scientific_article_files/2021-05/v03210275_web.pdf

Li, R., Xu, M., Wang, C., Qu, S., Shi, K., Li, C., Xu, X. & Ji, Z. (2021). Emissions of the InGaN/GaN MQW LEDs with the InGaN well layer grown at different temperatures. Superlattices and Microstructures, 160, Artikel 107090. https://doi.org/10.1016/j.spmi.2021.107090

Yesiltas, B., Garcia-Moreno, P. J., Sørensen, A.-D. M., Soria Caindec, A. M., Hyldig, G., Anankanbil, S., Guo, Z. & Jacobsen, C. (2021). Enrichment of mayonnaise with a high fat fish oil-in-water emulsion stabilized with modified DATEM C14 enhances oxidative stability. Food Chemistry, 341(Part 2), Artikel 128141. https://doi.org/10.1016/j.foodchem.2020.128141

Liljenhjerte, J. & Nygaard, J. V. (2021). Evaluating stabilizing initiatives to extend coiled tubing reach. Journal of Petroleum Science and Engineering, 205, Artikel 108905. https://doi.org/10.1016/j.petrol.2021.108905

Friis, S. J., Nygaard, J. V., Poulsen, M., Strøm Hansen, T. & Herskind, P. (2021). Examination of Porcine Gastric Biomechanics in the Antrum Region. International Journal of Biomedical and Biological Engineering, 15(10). https://publications.waset.org/abstracts/134807/pdf

Lin, S., Liu, H., Svenningsen, E. B., Wollesen, M., Jacobsen, K. M., Andersen, F. D., Moyano-Villameriel, J., Pedersen, C. N., Nørby, P., Tørring, T. & Poulsen, T. B. (2021). Expanding the antibacterial selectivity of polyether ionophore antibiotics through diversity-focused semisynthesis. Nature Chemistry, 13(1), 47-55. https://doi.org/10.1038/s41557-020-00601-1

Petermeier, P., Fortuna, C., M. Hübschmann, K., Nahuel Bidart Costoya, G., Tørring, T., Teze, D., Welner, D. H. & Kara, S. (2021). Exploring the in Vitro Operating Window of Glycosyltransferase PtUGT1 from Polygonum tinctorium for a Biocatalytic Route to Indigo Dye. ACS Sustainable Chemistry & Engineering, 9(25), 8497-8506. https://doi.org/10.1021/acssuschemeng.1c01536

Lyu, J., Gao, R. & Guo, Z. (2021). Galactosyldiacylglycerols: From a Photosynthesis-Associated Apparatus to Structure-Defined In Vitro Assembling. Journal of Agricultural and Food Chemistry, 69(32), 8910–8928. https://doi.org/10.1021/acs.jafc.1c00204

Shi, K., Wang, C., Li, R., Qu, S., Wu, Z., Deng, J., Xu, M., Xu, X. & Ji, Z. (2021). Influence of in volatilization on photoluminescence in InGaN/GaN multiple quantum wells. Materials Express, 11(12), 2033-2038.

Salmon, M. K., Hammer, K. E., Nygaard, J. V., Korsholm, K., Johansen, P. & Nielsen-Kudsk, J. E. (2021). Left atrial appendage occlusion with the Amulet device: to tug or not to tug? Journal of Interventional Cardiac Electrophysiology, 61(1), 199-206. https://doi.org/10.1007/s10840-020-00821-y

Su, Y., Qiu, T., Song, W., Han, X., Sun, M., Wang, Z., Xie, H., Dong, MD. & Chen, M. (2021). Melt Electrospinning Writing of Magnetic Microrobots. Advanced Science, 8(3), Artikel 2003177. https://doi.org/10.1002/advs.202003177

Chumduri, C., Kumar Gurumurthy, R., Berger, H., Dietrich, O., Kumar, N., Koster, S., Brinkmann, V., Hoffmann, K., Drabkina, M., Arampatzi, P., Son, D., Klemm, U., Mollenkopf, H.-J., Herbst, H., Mangler, M., Vogel, J., Saliba, A.-E. & Meyer, T. F. (2021). Opposing Wnt signals regulate cervical squamocolumnar homeostasis and emergence of metaplasia. Nature Cell Biology, 23(2), 184–197. https://doi.org/10.1038/s41556-020-00619-0

Zong, L., Zhang, Y., Shao, Z., Wang, Y., Guo, Z., Gao, R. & Eser, B. E. (2021). Optimization and Engineering of a Self-Sufficient CYP102 Enzyme from Bacillus amyloliquefaciens towards Synthesis of In-Chain Hydroxy Fatty Acids. Catalysts, 11(6), Artikel 665. https://doi.org/10.3390/catal11060665

Santner, P., Szabó, L. K., Chanquia, S. N., Høj Merrild, A., Hollmann, F., Kara, S. & Eser, B. E. (2021). Optimization and Engineering of Fatty Acid Photodecarboxylase for Substrate Specificity. ChemCatChem, 13(18), 4038-4046. https://doi.org/10.1002/cctc.202100840

Stenderup, K. & Overby, S. S. (2021). Oral Group Examination Method to Evaluate Collaborative and Individual Learning. I J. Bennedsen, K. Edström, M. S. Gudjonsdottir, I. Sæmundsdóttir, N. Kuptasthien, J. Roslöf & A. Sripakagorn (red.), The 17th International CDIO Conference: Proceedings - Full Papers (s. 630-644) http://www.cdio2021.chula.ac.th/download/CDIO2021_proceeding.pdf

Xu, R., Li, S., Shi, M., Li, Z., Wang, Y., Li, J., Li, Q., Klausen, L. H., Li, A., Zhao, H., Chen, M., Hu, J., Dong, MD. & Li, N. (2021). Peptide-based high-density lipoprotein promotes adipose tissue browning and restrains development of atherosclerosis and type 2 diabetes. Nano Today, 36, Artikel 101054. https://doi.org/10.1016/j.nantod.2020.101054

Sonnenberg-Riethmacher, E., Miehe, M. & Riethmacher, D. (2021). Periostin in Allergy and Inflammation. Frontiers in Immunology, 12, Artikel 722170. https://doi.org/10.3389/fimmu.2021.722170

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Revideret 13.11.2025

AU Engineering