Publications by Medical Biotechnology

Are you looking for publications by Section of Medical Biotechnology? On this page you can find all the publications made by the Section of Medical Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Ouyang, Y., Zhang, C., Wang, J., Guo, Z., Wang, Z. & Dong, M. (2025). Gate-Tunable Dual-Mode Optoelectronic Device for Self-Powered Photodetector and Optoelectronic Synapse. Advanced Science, 12(17), Artikel 2416259. https://doi.org/10.1002/advs.202416259

Tvilum, M., Lutz, C. M., Knap, M. M., Hoffmann, L., Khalil, A. A., Holt, M. I., Kandi, M., Schmidt, H. H., Appelt, A. L., Alber, M. & Møller, D. S. (2023). Different benefits of adaptive radiotherapy for different histologies of NSCLC. Acta Oncologica, 62(11), 1426-1432. https://doi.org/10.1080/0284186X.2023.2260944

Ma, Y., Bittner, J. P., Vernet, G., Zhang, N. & Kara, S. (2025). Linkers in Action: Exploring Fusion Enzymes for Oxyfunctionlizations in Non-Conventional Media Through Experiments and Simulations. ChemCatChem, 17(9), Artikel e202401893. https://doi.org/10.1002/cctc.202401893

Tang, Y., Friec, A. L., Chen, M. & Sun, D. (2025). Designed Biomaterial-Enhanced Cell Transplantation for Neural Tissue Engineering. Aggregate, 6(5), Artikel e70022. https://doi.org/10.1002/agt2.70022

Ma, Y., Vernet, G., Zhang, N. & Kara, S. (2025). Exploring DES-Water Mixtures for Improved ADH-CHMO Fusion Enzyme Performance in Linear Cascades. ChemCatChem, 17(5), Artikel e202401792. https://doi.org/10.1002/cctc.202401792

Merrild, A., Svenningsen, T., Chevrette, M. & Tørring, T. (2025). Evolution-Guided Discovery of Antimycobacterial Triculamin-Like Lasso Peptides. Angewandte Chemie International Edition, 64(20), Artikel e202425134. https://doi.org/10.1002/anie.202425134

Das, D., Eser, B. E., Han, J., Sciore, A. & Marsh, E. N. G. (2012). Erratum: Oxygen-independent decarbonylation of aldehydes by cyanobacterial aldehyde decarbonylase: A new reaction of diiron enzymes (Angewandte Chemie - International Edition (2011) 50 DOI: 10.1002/anie.201101552). Angewandte Chemie - International Edition, 51(32). https://doi.org/10.1002/anie.201204831

Kim, H., Mi, H. T. N., Ahn, J. H., Lee, J. S., Eser, B. E., Choi, J. & Han, J. (2024). Glycoside-metabolizing oxidoreductase D3dgpA from human gut bacterium. Frontiers in Bioengineering and Biotechnology, 12, Artikel 1413854. https://doi.org/10.3389/fbioe.2024.1413854

Mi, H. T. N., Chaiyasarn, S., Eser, B. E., Tan, S. R. S., Burapan, S. & Han, J. (2022). Allyl Aryl Ether Cleavage by Blautia sp. MRG-PMF1 Cocorrinoid O-Demethylase. Microbiology Spectrum, 10(5). https://doi.org/10.1128/spectrum.03305-22

Eser, B. E., Das, D., Han, J., Jones, P. R. & Marsh, E. N. G. (2012). Erratum: Oxygen-independent alkane formation by non-heme iron-dependent cyanobacterial aldehyde decarbonylase: Investigation of kinetics and requirement for an external electron donor (Biochemistry (2011) 50:49 (10743-10750). DOI: 10.1021/bi2012417). Biochemistry, 51(28), 5703. https://doi.org/10.1021/bi300837j

Li, Z., Zhang, Y., Balle, T., Eser, B. E., Fang, Y. & Guo, Z. (2025). Preparation of Cello-Oligosaccharides by Precise-Controlled Enzymatic Depolymerization and Its Amphiphilic Functionalization for High-Oil Load Emulsification. Journal of Agricultural and Food Chemistry, 73(2), 1458–1467. https://doi.org/10.1021/acs.jafc.4c08886

Jensen, B. N., Tong, T., Skovborg, G., Zhang, Y., Müller, C. A., Matthiesen, C. L., Eschen, J. T., Elbæk, K. J., Wang, Y., Pallesen, L. T., Seliktar, D., Dong, M., Vægter, C. B., Korshoej, A. R. & Chen, M. (2024). Electromagnetic Stimulated Anisotropic Hydrogels for Guided Neuronal Morphogenesis. bioRxiv. https://doi.org/10.1101/2024.09.29.615659

Zdouc, M. M., Blin, K., Louwen, N. L. L., Navarro, J., Loureiro, C., Bader, C. D., Bailey, C. B., Barra, L., Booth, T. J., Bozhüyük, K. A. J., Cediel-Becerra, J. D. D., Charlop-Powers, Z., Chevrette, M. G., Chooi, Y. H., D'Agostino, P. M., de Rond, T., Del Pup, E., Duncan, K. R., Gu, W. ... Medema, M. H. (2025). MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration. Nucleic Acids Research, 53(D1), D678-D690. https://doi.org/10.1093/nar/gkae1115

Merhi, Y., Lozano Montero, K., Johansen, P., Mantysalo, M. & Agarwala, S. (2025). Evaluating Piezoelectric Performance of Biodegradable PLLA Film and Its Application for Aortic Annuloplasty. https://chemrxiv.org/engage/chemrxiv/article-details/677788f9fa469535b99d3829

Merhi, Y., Agarwala, S., Goumarre, V. O. Y., Lozano Montero, K., Mantysalo, M., Klarskov, P. & Amarasinghe, Y. (2024). THz Spectroscopy Analysis of Crystallinity Optimization for Enhanced Piezoelectricity in Biodegradable Poly-L-Lactide Acid. I FLEPS 2024 - IEEE International Conference on Flexible and Printable Sensors and Systems, Proceedings: Conference Proceedings (s. 1-4). IEEE. https://doi.org/10.1109/FLEPS61194.2024.10604083

Mekureyaw, M. F., Junker, A., Bai, L., Zhang, Y., Wei, Z. & Guo, Z. (2025). Laccase based per- and polyfluoroalkyl substances degradation: Status and future perspectives. Water Research, 271, Artikel 122888. https://doi.org/10.1016/j.watres.2024.122888

Benfeldt, F. V., Wang, F., Bredahl, N., Gao, R., Guo, Z. & Eser, B. E. (2024). A Highly Efficient Ferulic Acid Decarboxylase from Capronia coronata: Characterization and Biocatalytic Applications. (s. xxx-xxx). ChemRxiv https://doi.org/10.26434/chemrxiv-2024-0npph-v2

Ouyang, Y., Jiang, Z., Ulstrup, S., Guo, Z., Wang, Z. & Dong, MD. (2024). Enhancing MoS2 Electronic Performance with Solid-State Lithium-Ion Electrolyte Contacts through Dielectric Screening. ACS Nano, 18(49), 33310-33318. https://doi.org/10.1021/acsnano.4c05973

Shi, T., Liu, Y., Wang, D., Xia, D., Li, B., Xu, R., Li, N., Liang, C. & Chen, M. (2024). Spatially engineering tri-layer nanofiber dressings featuring asymmetric wettability for wound healing. Nano Materials Science, 6(5), 611-624. https://doi.org/10.1016/j.nanoms.2024.01.008

Friis, S. J., Strøm Hansen, T., Olesen, C. G., Poulsen, M., Gregersen, H. & Nygaard, J. V. (2025). Experimental and numerical study of solid needle insertions into human stomach tissue. Journal of the Mechanical Behavior of Biomedical Materials, 162, Artikel 106832. https://doi.org/10.1016/j.jmbbm.2024.106832

Prakash, P. G., Kumar, N., Gurumurthy, R. K. & Chumduri, C. (2024). Temporal single-cell RNA sequencing dataset of gastroesophagus development from embryonic to post-natal stages. Scientific Data, 11(1), Artikel 1238. https://doi.org/10.1038/s41597-024-04081-7

Li, Z., Kovács, P., Friec, A. L., Jensen, B. N., Nygaard, J. V. & Chen, M. (2025). Mechanical memory based biofabrication of hierarchical elastic cardiac tissue. Biofabrication, 17(1), Artikel 015013. https://doi.org/10.1088/1758-5090/ad89fd

Chanquia, S. N., Bittner, J. P., Santner, P., Szabó, L. K., Madsen, J. S., Øhlenschlæger, M. L., Sarvari, A. G., Merrild, A. H., Fo̷nss, K. G., Jaron, D., Lutz, L., Kara, S. & Eser, B. E. (2024). Active-Site Mutagenesis of Fatty Acid Photodecarboxylase: Experimental and Computational Insight into Substrate Chain-Length Specificity. ACS Catalysis, 14(21), 15837-15849. https://doi.org/10.1021/acscatal.4c02970

Svenningsen, T. (2024). Bridging the Gap: Understanding Triculamin Biosynthesis through In vitro Reconstitution and Genetic Analysis. Poster-session præsenteret på Microbial Secondary Metabolites
in Microbiomes , Helsingør, Danmark.

Svenningsen, T. (2024). Uncovering the biosynthesis of the non-canonical lasso peptide Triculamin through in vitro reconstitution. Poster-session præsenteret på 4th Synthetic Biology of Natural Products Conference, Cancun, Mexico.

Hougaard, R. F., Andersen, F. D. & Tørring, T. (2024). Scaffolding scientific inquiry: Adapting Tiny Earth for engaging high school students and their teachers in authentic research. Abstract fra The Nordic conference on Science Education Research, NFSUN 2024, Reykjavik, Island.

Huang, Z., Qin, D., Abuduwupuer, X., Cao, L., Piao, Y., Shao, Z., Jiang, L., Guo, Z. & Gao, R. (2024). Regulate catalytic performance by engineering non-regular structure of extradiol dioxygenase: An entrance to bottom strategy. International Journal of Biological Macromolecules, 281(Part 1), 1-13. Artikel 136246. https://doi.org/10.1016/j.ijbiomac.2024.136246

Merrild, A. H., Johnsen, N. K., Zhang, M., Bogojevic, O., Ouyang, Y. & Guo, Z. (2024). De Novo Synthesis of Perdeuterated Phosphoinositide by Installing a Non-native Phospholipid Biopathway in E. coli. ACS Synthetic Biology, 13(10), 3344-3353. Artikel 39292964. https://doi.org/10.1021/acssynbio.4c00413

Zhang, W., Wang, J., Chen, M. & Dong, M. (2024). Sustainable synthesis: Unlocking potential with plasma-assisted conversion. Matter, 7(8), 2764-2765. https://doi.org/10.1016/j.matt.2024.06.033

Vernet, G., Ma, Y., Serban, S., Basso, A., Zhang, N. & Kara, S. (2024). Metal Affinity Fusion Enzyme Immobilization: Batch Process Showcase for Cascading Alcohol Oxidation and Bayer-Villiger Oxidation in Microaqueous Media. ACS Sustainable Chemistry and Engineering, 12(29), 10820-10830. https://doi.org/10.1021/acssuschemeng.4c02236

Sarikhani, E., Meganathan, D. P., Larsen, A. K. K., Rahmani, K., Tsai, C. T., Lu, C. H., Marquez-Serrano, A., Sadr, L., Li, X., Dong, M., Santoro, F., Cui, B., Klausen, L. H. & Jahed, Z. (2024). Engineering the Cellular Microenvironment: Integrating Three-Dimensional Nontopographical and Two-Dimensional Biochemical Cues for Precise Control of Cellular Behavior. ACS Nano, 18(29), 19064-19076. https://doi.org/10.1021/acsnano.4c03743

Chumduri, C., Kumar Gurumurthy, R., Berger, H., Koster, S., Brinkmann, V., Klemm, U., Mollenkopf, H.-J., Herbst, H., Mangler, M. & Meyer, T. F. (2018). Transition of Wnt signaling microenvironment delineates the squamo-columnar junction and emergence of squamous metaplasia of the cervix. https://doi.org/10.1101/443770

Mi, H. T. N., Kim, H., Lee, J. S., Eser, B. E. & Han, J. (2024). Flavonoids Biotransformation by Human Gut Bacterium Dorea sp. MRG-IFC3 Cell-Free Extract. Journal of Microbiology and Biotechnology, 34(6), 1270-1275. https://doi.org/10.4014/jmb.2403.03058

Larsen, C. K., Lindquist, P., Rosenkilde, M., Madsen, A. R., Haselmann, K., Glendorf, T., Olesen, K., Kodal, A. L. B. & Tørring, T. (2024). Using LanM Enzymes to Modify Glucagon-Like Peptides 1 and 2 in E. coli. ChemBioChem, 25(13), Artikel e202400201. https://doi.org/10.1002/cbic.202400201

Mathiasen, S. S., M. Kanta, J., Ploug Frydenberg, R., Lundsgaard, A., Guo, Z., M. Fritzen, A., Kiens, B., Wiking, L. & Kleinert, M. (2024). Novel methodology to enrich medium- and short-chain fatty acids in milk fat to improve metabolic health. Food & Function, 15(15), 7951-7960. https://doi.org/10.1039/D4FO00267A, https://doi.org/10.1039/d4fo00267a

Wang, J., Zhang, W., Wu, T., Chen, M. & Dong, M. (2024). Occurrence of giant plasma bubble in liquid. Matter, 7(9), 3024-3035. https://doi.org/10.1016/j.matt.2024.04.032

Mathiasen, S. S., Ploug Frydenberg, R., Kleinert, M., Kiens, B., Guo, Z. & Wiking, L. (2024). Novel milk fat fractions for health and functionality obtained by short-path distillation. LWT, 201, Artikel 116255. https://doi.org/10.1016/j.lwt.2024.116255

Wang, F., Ouyang, Y., Zhou, P., Zhang, Y., Gao, R., Eser, B. E. & Guo, Z. (2024). NIR-accelerated cascade reaction for degradation of organophosphorus compounds by Au/PTE/ZIF-8: Cooperative effect and mechanism. Catalysis Science & Technology, 14(12), 3424-3435. https://doi.org/10.1039/D4CY00311J

Kumar, N., Prakash, P. G., Wentland, C., Kurian, S. M., Jethva, G., Brinkmann, V., Mollenkopf, H. J., Krammer, T., Toussaint, C., Saliba, A. E., Biebl, M., Jürgensen, C., Wiedenmann, B., Meyer, T. F., Gurumurthy, R. K. & Chumduri, C. (2024). Decoding spatiotemporal transcriptional dynamics and epithelial fibroblast crosstalk during gastroesophageal junction development through single cell analysis. Nature Communications, 15(1), Artikel 3064. https://doi.org/10.1038/s41467-024-47173-z

Toftdal, M. S., Christensen, N. P., Kadumudi, F. B., Dolatshahi-Pirouz, A., Grunnet, L. G. & Chen, M. (2024). Mechanically reinforced hydrogel vehicle delivering angiogenic factor for beta cell therapy. Journal of Colloid and Interface Science, 667, 54-63. https://doi.org/10.1016/j.jcis.2024.04.050

Anand, S., Müller, C. A., Nørrehvedde Jensen, B. & Chen, M. (2024). Embracing Remote Fields as the Fourth Dimension of Tissue Biofabrication. Advanced Functional Materials, 34(32), Artikel 2401654. https://doi.org/10.1002/adfm.202401654

Toftdal, M. S., Grunnet, L. G. & Chen, M. (2024). Emerging Strategies for Beta Cell Encapsulation for Type 1 Diabetes Therapy. Advanced Healthcare Materials, 13(19), Artikel 2400185. https://doi.org/10.1002/adhm.202400185

Li, L., Liu, G. & Guo, Z. (2024). Oleogels Produced by Direct Methods Using as Gelator: Fatty Acids (Including 12-HSA), Fatty Alcohols, Ceramides, Lecithins, Sterols, Cellulose Fibers, and Fumed Silica. I C. Palla & F. Valoppi (red.), Advances in Oleogel Development, Characterization, and Nutritional Aspects (s. 177–207). Springer. https://doi.org/10.1007/978-3-031-46831-5_8

Zhang, G., Li, Z., Guo, Z. & Charalampopoulos, D. (2024). Comparative extraction of melon seed (Cucumis melo L.) oil by conventional and enzymatic methods: physicochemical properties and oxidative stability. Journal of Agriculture and Food Research, 16, Artikel 101182. https://doi.org/10.1016/j.jafr.2024.101182

Borcher Møller, S. L., Rasmussen, M. H., Li, J., Svenningsen, E. B., Wørmer, G. J., Tørring, T. & Poulsen, T. B. (2024). The Biological Activities of Polyether Ionophore Antibiotic Routiennocin is Independent of Absolute Stereochemistry. ChemBioChem, 25(7), Artikel e202400013. https://doi.org/10.1002/cbic.202400013

Huang, Z., Gu, Z., Abuduwupuer, X., Qin, D., Liu, Y., Guo, Z. & Gao, R. (2024). Engineering non-conservative substrate recognition sites of extradiol dioxygenase: Computation guided design to diversify and accelerate degradation of aromatic compounds. International Journal of Biological Macromolecules, 264(2), Artikel 130739. https://doi.org/10.1016/j.ijbiomac.2024.130739

van der Horst, D., Kurmasheva, N., Marqvorsen, M. H. S., Assil, S., Rahimic, A. H. F., Kollmann, C. F., Silva da Costa, L., Wu, Q., Zhao, J., Cesari, E., Iversen, M. B., Ren, F., Jensen, T. I., Narita, R., Schack, V. R., Zhang, B.-C., Bak, R. O., Sette, C., Fenton, R. A. ... Olagnier, D. (2024). SAM68 directs STING signaling to apoptosis in macrophages. Communications Biology, 7, 283. Artikel 283. https://doi.org/10.1038/s42003-024-05969-1

Su, Y., Zhang, Y., Chen, Y., Majidi, S. S., Dong, M. & Chen, M. (2024). Surface recrystallization on melt electrowritten scaffolds for acceleration of osteogenic differentiation. Materials Today Physics, 41, Artikel 101344. https://doi.org/10.1016/j.mtphys.2024.101344

Juul-Madsen, K., Parbo, P., Ismail, R., Ovesen, P. L., Schmidt, V., Madsen, L. S., Thyrsted, J., Gierl, S., Breum, M., Larsen, A., Andersen, M. N., Romero-Ramos, M., Holm, C. K., Andersen, G. R., Zhao, H., Schuck, P., Nygaard, J. V., Sutherland, D. S., Eskildsen, S. F. ... Vorup-Jensen, T. (2024). Amyloid-β aggregates activate peripheral monocytes in mild cognitive impairment. Nature Communications, 15(1), Artikel 1224. https://doi.org/10.1038/s41467-024-45627-y

Cao, W., Xia, D., Zhou, L., Liu, Y., Wang, D., Liang, C. & Chen, M. (2024). Antibacterial and antioxidant wound dressings with pH responsive release properties accelerate chronic wound healing. Materials Today Physics, 40, Artikel 101316. https://doi.org/10.1016/j.mtphys.2023.101316

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Revideret 13.11.2025

AU Engineering