Publications by Environmental Engineering

Are you looking for publications by Section of Environmental Engineering? On this page you can find all the publications made by the Section of Environmental Engineering - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Pedersen, J., Hafner, S. D. & Adamsen, A. P. S. (2022). Effectiveness of mechanical separation for reducing ammonia loss from field-applied slurry: Assessment through literature review and model calculations. Journal of Environmental Management, 323, Artikel 116196. https://doi.org/10.1016/j.jenvman.2022.116196

Pedersen, J. & Nyord, T. (2023). Effect of low-dose acidification of slurry digestate on ammonia emissions after field application (short communication). Atmospheric Environment: X, 17, Artikel 100205. https://doi.org/10.1016/j.aeaoa.2023.100205

Pedersen, J., Hafner, S. D. & Adamsen, A. P. S., (2023). Ammonia emissions from field applied solid manure, Nr. 2021-0220838, 16 s., mar. 01, 2023.

Pedersen, J., Feilberg, A. & Nyord, T. (2019). Application of PTR-TOF-MS for measurement of odor realease from slurry application in field trials using dynamic chambers. Abstract fra PTR-MS Conference, Innsbruck, Østrig.

Pedersen, J., Hafner, S. D., Karlsson, V., Pacholski, A. S., Labouriau, R. & Kamp, J. N. (2023). Optimized design of flux chambers for online measurements of NH3 emission after field application of slurry with full-scale farm machinery. Abstract fra EGU General Assembly 2023, Vienna, Østrig. https://doi.org/10.5194/egusphere-egu23-12677

Pedersen, J. & Hafner, S. D. (2023). Ammonia emissions after field application of anaerobically digested animal slurry: Literature review and perspectives. Agriculture, Ecosystems & Environment, 357, Artikel 108697. https://doi.org/10.1016/j.agee.2023.108697

Pedersen, J., Romio, C., Labouriau, R., Pacholski, A. S. & Hafner, S. D. (2023). Mitigating ammonia emission from slurry digestate applied to winter wheat crops: effect of digestate composition, digestate treatment, and application technique. Abstract fra RAMIRAN, Cambridge, Storbritannien.

Pedersen, J. & Hafner, S. D. (2023). Ammonia emissions after field application of anaerobically digested animal slurry: Literature review and perspectives. Abstract fra RAMIRAN, Cambridge, Storbritannien.

Pedersen, J. & Adamsen, A. P. S., (2024). Faglig bidrag til vurdering af forsøgsplan samt forsøgsresultater for ureagødning fra Flex Fertilizer, Nr. 2024-0647845, 5 s., apr. 11, 2024. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Pedersen, J., Labouriau, R. & Feilberg, A. (2024). Effect of separation and air-plasma technology on NH3 emissions from field applied biogas digestate and pig slurry to grassland. 53. Abstract fra N Workshop, Aarhus, Danmark. https://conferences.au.dk/fileadmin/conferences/2024/nworkshop/Book_of_abstracts_NW2024.pdf

Pedersen, J., Hafner, S. D., Pacholski, A. S., I. Karlsson, V., Rong, L., Labouriau, R. & Kamp, J. N. (2024). Evaluation of optimized flux chamber design for measurement of ammonia emission after field application of slurry with full-scale farm machinery. Atmospheric Measurement Techniques, 17(14), 4493–4505. https://doi.org/10.5194/amt-17-4493-2024

Pedersen, J., Labouriau, R. & Feilberg, A. (2024). Effect of slurry separation and air-plasma treatment on NH₃ and VOC emissions from field applied biogas digestate and pig slurry to grassland. Biosystems Engineering, 247, 257-266. https://doi.org/10.1016/j.biosystemseng.2024.09.014

Pedersen, J. & Petersen, S. O., (2024). Sammenhæng mellem ammoniakemission og emission af klimagasser i relation til teknikkrav ved udbringning af gødning, Nr. 2023-0599078, 20 s., dec. 13, 2024. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Pedersen, J., Hafner, S. D., Kamp, J. N., Petersen, S. O. & Hutchings, N., (2025). Ammonia emissions from urea and ammonium sulfate application and the effect of injection and urease inhibitors under Danish conditions, Nr. 2024-0711286, 14 s., mar. 19, 2025. Rådgivningsnotat fra DCA - Nationalt Center for Fødevarer og Jordbrug

Pedersen, J. M. (2020). Mitigating gaseous emissions following land application of manure slurry in growing crops. [Ph.d.-afhandling, Aarhus Universitet]. Aarhus Universitet.

Pedersen, J., Romio, C., Pacholski, A. S. & Hafner, S. D. (2025). Evaluation of application and treatment options for reducing ammonia emissions from field-applied slurry digestate. Abstract fra RAMIRAN 2025, Wageningen, Holland.

Pedersen, J., Hafner, S. D., Romio, C., Pacholski, A. S. & Labouriau, R. (2025). Effect of digestate and untreated slurry properties on ammonia emission from field application. Abstract fra RAMIRAN 2025, Wageningen, Holland.

Pedersen, L., Dechesne, A. & Smets, B. F. (2015). A nitrate sensitive planar optode; performance and interferences. Talanta, 144, 933-937. https://doi.org/10.1016/j.talanta.2015.07.046

Pedersen, L. L., Smets, B. F. & Dechesne, A. (2015). Measuring biogeochemical heterogeneity at the micro scale in soils and sediments. Soil Biology & Biochemistry, 90, 122-138. https://doi.org/10.1016/j.soilbio.2015.08.003

Pedersen, J. (2024). Ammoniakfordampning ved udbringning af afgasset gylle i græs.

Pedersen, J., Hafner, S. D. & Pacholski, A. (2026). Methodological factors affecting ammonia emission measurement with flux chambers from field-applied biogas digestate slurry (Technical note). Atmospheric Environment: X, 29, Artikel 100408. https://doi.org/10.1016/j.aeaoa.2025.100408

Parra, B., Cockx, B., Lutz, V. T., Brøndsted, L., Smets, B. F. & Dechesne, A. (2024). Isolation and characterization of novel plasmid-dependent phages infecting bacteria carrying diverse conjugative plasmids. Microbiology Spectrum, 12(1), Artikel e0253723. https://doi.org/10.1128/spectrum.02537-23

Parra, B., Lutz, V. T., Brøndsted, L., Carmona, J. L., Palomo, A., Nesme, J., Van Hung Le, V., Smets, B. F. & Dechesne, A. (2024). Characterization and Abundance of Plasmid-Dependent Alphatectivirus Bacteriophages. Microbial Ecology, 87(1), Artikel 85. https://doi.org/10.1007/s00248-024-02401-3

Parajuli, R., Dalgaard, T., Jørgensen, U., Adamsen, A. P. S., Knudsen, M. T., Birkved, M., Gylling, M. & Schjørring, J. K. (2015). Biorefining in the prevailing energy and material crisis: a review on sustainable pathways for biorefinery value chains and sustainability assessment methodologies. Renewable & Sustainable Energy Reviews, 43, 244-263. https://doi.org/10.1016/j.rser.2014.11.041

Papadopoulou, A., Hedegaard, M. J., Dechesne, A., Albrechtsen, H.-J., Musovic, S. & Smets, B. F. (2019). Methanotrophic contribution to biodegradation of phenoxy acids in cultures enriched from a groundwater-fed rapid sand filter. Applied Microbiology and Biotechnology, 103(2), 1007-1019. https://doi.org/10.1007/s00253-018-9501-8

Palomo, A., Dechesne, A., Smets, B. F. & Zheng, Y. (2023). Narrow host range phages infect essential bacteria for water purification reactions in groundwater-fed rapid sand filters. Water Research, 245, Artikel 120655. https://doi.org/10.1016/j.watres.2023.120655

Palomo, A., Fowler, J., Gülay, A., Rasmussen, S., Sicheritz-Pontén, T. & Smets, B. F. (2016). Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp. I S M E Journal, 10, 2569–2581. https://doi.org/10.1038/ismej.2016.63

Palomo, A., Pedersen, A. G., Fowler, J., Dechesne, A., Sicheritz-Pontén, T. & Smets, B. F. (2018). Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira. I S M E Journal, 12(7), 1779-1793. https://doi.org/10.1038/s41396-018-0083-3

Palomo, A., Azevedo, D., Touceda-Suárez, M., Domingo-Félez, C., Mutlu, A. G., Dechesne, A., Wang, Y., Zhang, T. & Smets, B. F. (2022). Efficient management of the nitritation-anammox microbiome through intermittent aeration: absence of the NOB guild and expansion and diversity of the NOx reducing guild suggests a highly reticulated nitrogen cycle. Environmental Microbiomes, 17(1), Artikel 39. https://doi.org/10.1186/s40793-022-00432-2

Palomo, A., Dechesne, A., Cordero, O. X. & Smets, B. F. (2022). Evolutionary Ecology of Natural Comammox Nitrospira Populations. mSystems, 7(1), Artikel e01139-21. https://doi.org/10.1128/msystems.01139-21

Palomo, A., Dechesne, A., Pedersen, A. G. & Smets, B. F. (2022). Genomic profiling of Nitrospira species reveals ecological success of comammox Nitrospira. Microbiome, 10(1), Artikel 204. https://doi.org/10.1186/s40168-022-01411-y

Palomo, A., Fowler, S. J., Nemer, I. M., Valverde-Pérez, B., Zheng, Y., Ma, Y. & Smets, B. F. (2026). Functional redundancy and niche complementarity maintain nitrification stability in rapid sand filters. Frontiers in Microbiology, 16, Artikel 1741059. https://doi.org/10.3389/fmicb.2025.1741059

Owsianiak, M., Dechesne, A., Binning, P. J., Chambon, J. C. C., Sørensen, S. R. & Smets, B. F. (2010). Evaluation of Bioaugmentation with Entrapped Degrading Cells as a Soil Remediation Technology. Environmental Science & Technology, 44(19), 7622-7627. https://doi.org/10.1021/es101160u

Ottosen, L. D. M., Juhler, S., Guldberg, L. B., Nielsen, L. P., Schramm, A., Feilberg, A. & Revsbech, N. P. (2009). Ammonia removal limited by inhibition of metabolism and growth: Part of Session 2: Biological processes in air filters. I Bilag til CEBONA International Workshop (s. 13)

Ottosen, L. D. M., Juhler, S., Schramm, A., Revsbech, N. P., Feilberg, A., Guldberg, L. & Nielsen, L. P. (2010). Ammonia Removal Limited by Inhibition of Metabolism and Growth. Abstract fra ISME 13 - 13th International Symposium on Microbial Ecology, Seattle, WA, USA.

Ottosen, L. D. M., Juhler, S., Guldberg, L. B., Feilberg, A., Revsbech, N. P. & Nielsen, L. P. (2011). Regulation of ammonia oxidation in biotrickling airfilters with high ammonium load. Chemical Engineering Journal, 167(1), 198-205. https://doi.org/10.1016/j.cej.2010.12.022

Ottosen, L. D. M., Ward, A. J., Voigt, N. V., Kofoed, M. V. W., Møller, H. B., Robles, E. G. & Revsbech, N. P. (2015). Biomethanation by Hydrogen injection the main reactor. Poster-session præsenteret på World Congress on Anaerobic Digestion, Vina del Mar, Chile.

Ottosen, L. D. M., Feilberg, A., Kofoed, M. V. W. & Guldberg, L. B. (2019). Stimulering af biologisk omsætning. (Patentnummer DK2017PA70868).

Or, D., Smets, B. F., Wraith, J. M., Dechesne, A. & Friedman, S. P. (2007). Physical constraints affecting bacterial habitats and activity in unsaturated porous media – a review. Advances in Water Resources, 30, 1505-1527. https://doi.org/10.1016/j.advwatres.2006.05.025

Olesen, J. E., Larsen, R., Heckrath, G. J., Adamsen, A. P. & Green, O., (2010). Notat om mulige teknologier til kontrol af landbrugets miljøgodkendelser, Nr. 737166, 5 s., aug. 23, 2010.

Olesen, J. E., Jørgensen, U., Hermansen, J. E., Petersen, S. O., Eriksen, J., Søegaard, K., Vinther, F. P., Elsgaard, L., Lund, P., Nørgaard, J. V. & Møller, H. B. (2013). Effekter af tiltag til reduktion af landbrugets udledninger af drivhusgasser. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA rapport Nr. 027

Olesen, J. E., Møller, H. B., Petersen, S. O., Sørensen, P., Nyord, T. & Sommer, S. G. (2020). Bæredygtig biogas - klima og miljøeffekter af biogasproduktion. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA rapport Nr. 175 https://dcapub.au.dk/djfpublikation/index.asp?action=show&id=1454

Olesen, J. E., Møller, H. B., Petersen, S. O., Sørensen, P., Nyord, T. & Sommer, S. G. (2021). Sustainable biogas - climate and environmental effects of biogas production. DCA - Nationalt Center for Fødevarer og Jordbrug. DCA rapport Nr. 181 https://dcapub.au.dk/djfpublikation/index.asp?action=show&id=1463

Olesen, J. E., Feilberg, A., Lund, P., Jensen, S. K. & Christensen, J. H. (2021). Skru ned for gassen i landbruget. Jyllands-Posten, Sektion 1, 33-33.

Olesen, J. E., Andersen, M. N., Lund, P., Feilberg, A., Villumsen, T. M., Kristensen, H. L., Nielsen, O.-K., Zak, D. H., Lærke, P. E., Nørgaard, J. V., Kidmose, U., Jensen, M., Mogensen, L. & Knudsen, M. T. (2024). Finansieringsbehov til afdækning af centrale vidensbehov for en mere klimavenlig landbrugsproduktion. DCA - Nationalt Center for Fødevarer og Jordbrug. Rådgivningsrapport fra DCA - Nationalt Center for Fødevarer og Jordbrug

Olesen, J. E., Lund, P., Feilberg, A., Villumsen, T. M., Kristensen, H. L., Winding, A., Zak, D. H., Andersen, M. N., Lærke, P. E., Petersen, S. O., Elsgaard, L., Jensen, J. L., Eriksen, J., Munkholm, L. J., Nørgaard, J. V., Weisbjerg, M. R., Børsting, C. F., Kristensen, N. B., Østergaard, S. ... Poulsen, N. A. (2024). Estimering af videns- og finansieringsbehov for opnåelse af klimamål i 2030. DCA - Nationalt Center for Fødevarer og Jordbrug. Rådgivningsrapport fra DCA - Nationalt Center for Fødevarer og Jordbrug

Olesen, A. K., Pinilla-Redondo, R., Hansen, M. F., Russel, J., Dechesne, A., Smets, B. F., Madsen, J. S., Nesme, J. & Sørensen, S. J. (2022). IncHI1A plasmids potentially facilitate a horizontal flow of antibiotic resistance genes to pathogens in microbial communities of urban residential sewage. Molecular Ecology, 31(5), 1595-1608. https://doi.org/10.1111/mec.16346

Ogawa, H., Dahl, P. J., Suzuki, T., Kai, P. & Takai, H. (2011). A microbiological-based air cleaning system using a two-step process for removal of ammonia in discharge air from a pig rearing building. Biosystems Engineering, 109, 108-119. https://doi.org/10.1016/j.biosystemseng.2011.02.007

Nyord, T., Adamsen, A. P., Liu, D., Petersen, S. O. & Hansen, M. N. (2010). Emission af ammoniak, lugt og lattergas ved udbringning af gylle med slæbeslange, nedfældning og forsuring med SyreN- og Infarmsystemer: Notat om SyreN-projekt.

Nyord, T., Hansen, M. J., Grøn Sørensen, C., Jensen, A. L., Poulsen, H. D., Lund, P., Jensen, P. K., Melander, B., Børgesen, C. D., Thomsen, I. K., Hansen, E. M., Kjærgaard, C., Sørensen, P., Olesen, J. E., Holm, P. B. & Lund, M. S., (2012). Notat om status for anvendelsen af og udvikling af miljøteknologier på primære jordbrugsbedrifter, Nr. 822352, 25 s., jul. 02, 2012.

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Revideret 13.11.2025

AU Engineering