Publications by Medical Biotechnology

Are you looking for publications by Section of Medical Biotechnology? On this page you can find all the publications made by the Section of Medical Biotechnology - Department of Biological & Chemical Engineering, Aarhus University.

Below you can find a list of all the publications, their publishing date, their author(s), and titles. The list can be sorted by date, author, and title:

List of Publications

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Qu, S., Liu, J., Hu, J., Sun, L. & Xu, W. (2024). Flexible DPPT-TT/PEO Fiber-Exploiting Electro-optical Synaptic Transistor for Artificial Withdrawal Reflex Arc. Advanced Fiber Materials, 6(2), 401-413. https://doi.org/10.1007/s42765-023-00356-7

Qu, S., Yuan, Y., Ye, X. & Xu, W. (2024). High sensitivity artificial synapses using printed high-transmittance ITO fibers for neuromorphic computing. Chinese Chemical Letters, 35(12), Article 110030. https://doi.org/10.1016/j.cclet.2024.110030

Qu, S., Sun, L., Xu, H., Zhu, Q., Cheng, Y., Du, X., Yuan, Y., Ye, X., Gu, F. & Xu, W. (2025). A Flexible Neuromorphic Window Capable of In-Sensor Computing and Self-Adaptive Color Regulation. Advanced Functional Materials, Article e15967. https://doi.org/10.1002/adfm.202515967

Qu, S., Sun, L., Zhang, S., Liu, J., Li, Y., Liu, J. & Xu, W. (2023). An artificially-intelligent cornea with tactile sensation enables sensory expansion and interaction. Nature Communications, 14(1), Article 7181. https://doi.org/10.1038/s41467-023-42240-3

Pyrz, R. & Nygaard, J. V. (2003). In-situ delamination studies using X-ray microtomography. In D. Bruno (Ed.), Proceedings of International Conference on Composites in Construction--CCC2003 (pp. 189)

Pyrz, R. & Nygaard, J. V. (2002). In-situ delamination studies using X-ray microtomography. In Design Engineering (pp. 625-629). American Society of Mechanical Engineers (ASME). https://doi.org/10.1115/IMECE2002-33466

Prakash, P. G., Kumar, N., Gurumurthy, R. K. & Chumduri, C. (2024). Temporal single-cell RNA sequencing dataset of gastroesophagus development from embryonic to post-natal stages. Scientific Data, 11(1), Article 1238. https://doi.org/10.1038/s41597-024-04081-7

Prakash, P. G., Kumar, N., Koster, S., Wentland, C., Dhanraj, J., Gurumuthy, R. K. & Chumduri, C. (2025). Single-cell atlas of cervical organoids uncovers epithelial immune heterogeneity and intercellular cross-talk during Chlamydia infection. Science Advances, 11(40), eady1640. https://doi.org/10.1126/sciadv.ady1640

Prabakaran, T., Troldborg, A., Kumpunya, S., Alee, I., Marinković, E., Windross, S. J., Nandakumar, R., Narita, R., Zhang, B.-C., Carstensen, M., Vejvisithsakul, P., Marqvorsen, M. H. S., Iversen, M. B., Holm, C. K., Østergaard, L. J., Pedersen, F. S., Pisitkun, T., Behrendt, R., Pisitkun, P. & Paludan, S. R. (2021). A STING antagonist modulating the interaction with STIM1 blocks ER-to-Golgi trafficking and inhibits lupus pathology. EBioMedicine, 66, Article 103314. https://doi.org/10.1016/j.ebiom.2021.103314

Pourjafar, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2022). Construction, expression and functional characterization of an engineered antibody against tumor antigen MUC-1C. Protein Expression and Purification, 199, Article 106148. https://doi.org/10.1016/j.pep.2022.106148

Pourjafar, M., Saidijam, M., Miehe, M., Najafi, R., Soleimani, M. & Spillner, E. (2023). Surfaceome Profiling Suggests Potential of Anti-MUC1×EGFR Bispecific Antibody for Breast Cancer Targeted Therapy. Journal of Immunotherapy, 46(7), 245-261. https://doi.org/10.1097/CJI.0000000000000482

Plum, M., Tjerrild, L., Raiber, T., Bantleon, F., Bantleon, S., Miehe, M., Jabs, F., Seismann, H., Möbs, C., Pfützner, W., Jakob, T., Andersen, G. R. & Spillner, E. (2023). Structural and functional analyses of antibodies specific for modified core N-glycans suggest a role in T_H2 responses. Allergy, 78(1), 121-130. https://doi.org/10.1111/all.15417

Platts-Mills, T., Hilger, C., Jappe, U., van Hage, M., Gadermaier, G., Spillner, E., Lidholm, J., Aalberse, R. C., van Ree, R., Goodman, R. & Pomes, A. (2021). Carbohydrate Epitopes Currently Recognized as Targets for IgE Antibodies. Allergy: European Journal of Allergy and Clinical Immunology, 76(8), 2383-2394. https://doi.org/10.1111/all.14802.

Pijanka, J. K., Spang, M. T., Sorensen, T., Liu, J., Nguyen, T. D., Quigley, H. A. & Boote, C. (2015). Depth-dependent changes in collagen organization in the human peripapillary sclera. PLoS One, 10(2), e0118648. https://doi.org/10.1371/journal.pone.0118648

Pijanka, J. K., Kimball, E. C., Pease, M. E., Abass, A., Sorensen, T., Nguyen, T. D., Quigley, H. A. & Boote, C. (2014). Changes in scleral collagen organization in murine chronic experimental glaucoma. Investigative Ophthalmology & Visual Science, 55(10), 6554-64. https://doi.org/10.1167/iovs.14-15047

Pijanka, J. K., Coudrillier, B., Ziegler, K., Sorensen, T., Meek, K. M., Nguyen, T. D., Quigley, H. A. & Boote, C. (2012). Quantitative mapping of collagen fiber orientation in non-glaucoma and glaucoma posterior human sclerae. Investigative Ophthalmology & Visual Science, 53(9), 5258-70. https://doi.org/10.1167/iovs.12-9705

Picard, M., Jensen, A.-M. L., Sørensen, T. L.-M., Champeil, P., Møller, J. V. & Nissen, P. (2007). Ca(2+) versus Mg(2+) Coordination at the Nucleotide-binding site of the Sarcoplasmic Reticulum Ca(2+)-ATPase. Journal of Molecular Biology, 368(1), 1-7.

Perez Riverol, A., Romani Fernandes, L. G., Musacchio Lasa, A., Aparecido dos Santos-Pinto, J. R., Moitinho Abram, D., Izuka Moraes, G. H., Jabs, F., Miehe, M., Seismann, H., Sergio Palma, M., de Lima Zollner, R., Spillner, E. & Brochetto-Braga, M. R. (2018). Phospholipase A1-based cross-reactivity among venoms of clinically relevant Hymenoptera from Neotropical and temperate regions. Molecular Immunology, 93, 87-93. https://doi.org/10.1016/j.molimm.2017.11.007

Pedersen, M. B., Zhou, X., Larsen, E. K. U., Sørensen, U. S., Kjems, J., Nygaard, J. V., Nyengaard, J. R., Meyer, R. L., Boesen, T. & Vorup-Jensen, T. (2010). Curvature of Synthetic and Natural Surfaces is an Important Target Feature in Classical Pathway Complement Activation. Journal of Immunology, 184(4), 1931-1945. https://doi.org/10.4049/jimmunol.0902214

Pedersen, C. T., Loke, I., Lorentzen, A., Wolf, S., Kamble, M., Kristensen, S. K., Munch, D., Radutoiu, S., Spillner, E., Roepstorff, P., Thaysen-Andersen, M., Stougaard, J. & Dam, S. (2017). N-glycan maturation mutants in Lotus japonicus for basic and applied glycoprotein research. Plant Journal, 91(3), 394-407. https://doi.org/10.1111/tpj.13570

Olesen, C., Sørensen, T. L.-M., Nielsen, R. C., Møller, J. V. & Nissen, P. (2004). Dephosphorylation of the Calcium Pump Coupled to Counterion Occlusion. Science, 306, 2251-2255.

Olesen, L. Ø., Bouzinova, E., Severino, M., Sivasaravanaparan, M., Hasselstrøm, J. B., Finsen, B. & Wiborg, O. (2016). Behavioural Phenotyping of APPswe/PS1δE9 Mice: Age-Rrelated Changes and Effect of Long-Term Paroxetine Treatment. PLoS One, 11(11), Article e0165144.

Olesen, L. O., Sivasaravanaparan, M., Severino, M., Babcock, A. A., Bouzinova, E. V., West, M. J., Wiborg, O. & Finsen, B. (2017). Neuron and neuroblast numbers and cytogenesis in the dentate gyrus of aged APP(swe)/PS1(dE9) transgenic mice: Effect of long-term treatment with paroxetine. Neurobiology of Disease, 104, 50-60. https://doi.org/10.1016/j.nbd.2017.04.021

Offermann, N., Plum, M., Hübner, U., Rathloff, K., Braren, I., Fooke, M. & Spillner, E. (2016). Human serum substitution by artificial sera of scalable allergen reactivity based on polyclonal antibodies and chimeras of human FcγRI and IgE domains. Allergy: European Journal of Allergy and Clinical Immunology, 71(12), 1794-1799. https://doi.org/10.1111/all.13038

Nygaard, J. V., Andersen, M. Ø., Howard, K. A., Foss, M., Bünger, C., Kjems, J. & Besenbacher, F. (2008). Investigation of particle-functionalized tissue engineering scaffolds using X-ray tomographic microscopy. Biotechnology and Bioengineering (Print), 100(4), 820-9. https://doi.org/10.1002/bit.21796

Nygaard, J. V., Samuel, S. A., Kim, W. Y. & Besenbacher, F. (2009). Method for calculating pressures in a fluid stream through a tube section, especially a blood vessel with atherosclerotic plaque. (Patent No. PCT/Dk2008/050266).

Nygaard, J. V. & Rytter, J. (1999). A reinforced, flexible conduit and a method of manufacturing same.

Nygaard, J. V., Bjerre, L., Bünger, C. & Besenbacher, F. (2009). Structurally Graded Scaffolds.

Nygaard, J. V. & Lyckegaard, A. (2007). Sandwich Panel with a periodical and graded core manufactured using rapid prototyping. Journal of Sandwich Structures & Materials, 9(4), 365-376.

Nygaard, J. V. & Pyrz, R. (2003). Characterisation of Microcellular Foams using X-Ray Microtomography and Raman Spectroscopy. Cellular Polymers, 22(6), 347-369.

Nygaard, J. V., Foss, M., Cloetens, P., Kassem, M. & Besenbacher, F. (2008). Nanomesh evolved in polycaprolactone shown by synchrotron holo-tomography. Poster session presented at 8th World Biomaterials Congress, Amsterdam, Belgium.

Nygaard, J. V. & Pyz, R. (2005). Morphology of a Closed Cell Polyethylene Sandwich Core and its Tape Interphase: STVF rammeprogram I: Structurally Graded Polymeric Materials and Filled Polymers, Task C: Micromechanics and microstructure property correlations.

Nygaard, J. V. (2005). Femlab Analysis of Open Aluminium Foam in Compression. In Proceedings of the COMSOL Multiphysics User's Conference 2005

Nygaard, J. V., Andersen, M. Ø., Cloetens, P., Foss, M., Kassem, M., Kjems, J. & Besenbacher, F. (2008). Nanoscaffolds for Drug Delivery and Tissue Engineering. Poster session presented at iNANO 6^th annual meeting, Aarhus, Denmark.

Nygaard, J. V., Samuel, S. A., Kim, W. Y. & Besenbacher, F. (2008). Computer Aided Biological Response Assessment, CABRA applied to Atherosclerosis. Poster session presented at iNANO 6^th annual meeting, Aarhus, Denmark.

Nygaard, J. V., Andersen, M. Ø., Howard, K., Sasov, A., Kjems, J. & Besenbacher, F. (2004). Analysis of Nanoparticles in Scaffolds for Tissue Engineering by use of X-Ray Nano Tomography. Poster session presented at iNANO 4^th annual meeting, Aarhus, Denmark.

Nygaard, J. V., Bregnant, L., Mygind, T., Bünger, C. & Besenbacher, F. (2006). Tortuosity Flow Parameter in Scaffolds from Synchrotron Tomography. Poster session presented at Biology and Medicine with Low Energy Synchrotron Radiation, Institute for Storage Ring Facilities (ISA) at Aarhus University, Aarhus, Denmark.

Nygaard, J. V., Andersen, M. Ø., Cloetens, P., Foss, M., Kassem, M., Kjems, J. & Besenbacher, F. (2009). Polycaprolactone nanomesh cultured with hMSC evaluated by synchrotron tomography. Poster session presented at Self-assembly: from nature to clinics, Porto, Portugal.

Nygaard, J. V. (2010). Mechano transduction in human stem cells cultured in porous scaffolds. Poster session presented at ESB, Edinburgh.

Nygaard, J. V., Foss, M., Cloetens, P., Andersen, M. Ø., Kassem, M., Kjems, J. & Besenbacher, F. (2011). 3D deformation in nanoporous system for tissue phenotype emergence through stem cell specification. http://www.wksp-MBiomech.dem.ist.utl.pt

Nygaard, J. V., Uyar, T., Chen, M., Cloetens, P., Kingshott, P. & Besenbacher, F. (2011). Characterisation of internal morphologies in electrospun fibers by X-ray tomographic microscopy. Nanoscale, 3. https://doi.org/10.1039/c1nr10304k

Nygaard, J. V. (2012). CFD i fysiokemisk hydrodynamik - transport og reaktionsstrømning.

Nygaard, J. V. (2012). CFD - flow induced structural vibrations.

Nygaard, J. V. (2012). Mekanisk Design af Implantater og Apparater.

Nygaard, J. V. (2013). Combining Imaging Modalities in the Modelling of Multi Parameter Devices. In ASME 2013 Conference on Frontiers in Medical Devices: Applications of Computer Modeling and Simulation (FMD2013) (Vol. 2013). Article FMD2013-16124 American Society of Mechanical Engineers. https://doi.org/10.1115/FMD2013-16124

Nygaard, J. V. & Perti, C. (2015). Injectable Hierarchical Scaffolds. (Patent No. PCT/DK2014/050422). http://worldwide.espacenet.com/publicationDetails/biblio?DB=EPODOC&II=0&ND=3&adjacent=true&locale=en_EP&FT=D&date=20150618&CC=WO&NR=2015086029A1&KC=A1

Nygaard, J. V. (2015). Notes on the Hyperelasticity of Materials.

Nygaard, J. V. (2017). Computational Medicine: The Health Technology Program at Aarhus University applies computational biology to investigate the heterogeneity of tumours. Pan European Networks: Science & Technology, (22), 171. http://www.paneuropeannetworkspublications.com/ST22/files/assets/common/downloads/Pan%20European%20Networks%20-%20Science%20and%20Technology.pdf

Nygaard, J. V. (2013). Combining imaging modalities in the modeling of multiparameter devices. Journal of Medical Devices, Transactions of the ASME, 7(4). https://doi.org/10.1115/1.4025846

Nygaard, J. V., Skov, A. L. & Gross-Petersen, J. (2017). A project on innovation pipeline concepts. Abstract from Danish Hydrocarbon Research and Technology Centre Technology Conference 2017, Kolding, Denmark. http://www.oilgas.dtu.dk/-/media/Andre_Universitetsenheder/Oilgas_ny/Tech-conf/Tech-conf-17/DHRTC-Presentation-abstracts.ashx?la=da&hash=BE99E3BA882D5E80D55CFC91ADCA5BCEF493D9E5

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Revised 13.11.2025

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